EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPMEG00000021166 (Gene tree)
Gene ID: 106921243
Gene Symbol: snrnp200
Alias: -
Full Name: small nuclear ribonucleoprotein U5 subunit 200
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Minus strand
Length: 11772 bases
Position: chrKQ551459.1:285027-296798
Accession: 106921243
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000018150	ResIII	PF04851.15	1.4e-25	1	2
ENSPMEP00000018150	ResIII	PF04851.15	1.4e-25	2	2
ENSPMEP00000018150	DEAD	PF00270.29	8e-53	1	2
ENSPMEP00000018150	DEAD	PF00270.29	8e-53	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000027188	-	5526	XM_014992789	ENSPMEP00000018150	1841 (aa)	XP_014848275	-

Gene Model

Click here to download ENSPMEG00000021166's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000021166's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPMEG00000021166	snrnp200	72	31.695	ENSPMEG00000019475	hfm1	72	31.695

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000021166	snrnp200	99	90.165	ENSG00000144028	SNRNP200	97	90.165	Homo_sapiens
ENSPMEG00000021166	snrnp200	99	97.305	ENSAPOG00000010223	snrnp200	97	97.305	Acanthochromis_polyacanthus
ENSPMEG00000021166	snrnp200	99	90.220	ENSAMEG00000008996	SNRNP200	97	90.220	Ailuropoda_melanoleuca
ENSPMEG00000021166	snrnp200	99	96.645	ENSACIG00000001764	snrnp200	97	96.645	Amphilophus_citrinellus
ENSPMEG00000021166	snrnp200	99	97.085	ENSAOCG00000024593	snrnp200	99	96.590	Amphiprion_ocellaris
ENSPMEG00000021166	snrnp200	99	96.700	ENSAPEG00000012554	snrnp200	99	96.700	Amphiprion_percula
ENSPMEG00000021166	snrnp200	99	97.140	ENSATEG00000022522	snrnp200	97	97.140	Anabas_testudineus
ENSPMEG00000021166	snrnp200	99	90.549	ENSAPLG00000004313	SNRNP200	98	90.549	Anas_platyrhynchos
ENSPMEG00000021166	snrnp200	99	89.862	ENSACAG00000000434	SNRNP200	97	89.862	Anolis_carolinensis
ENSPMEG00000021166	snrnp200	99	86.137	ENSANAG00000036625	SNRNP200	97	85.918	Aotus_nancymaae
ENSPMEG00000021166	snrnp200	99	96.865	ENSACLG00000011188	snrnp200	97	96.865	Astatotilapia_calliptera
ENSPMEG00000021166	snrnp200	99	94.004	ENSAMXG00000005684	snrnp200	97	94.004	Astyanax_mexicanus
ENSPMEG00000021166	snrnp200	99	89.945	ENSBTAG00000000848	SNRNP200	97	89.945	Bos_taurus
ENSPMEG00000021166	snrnp200	99	90.165	ENSCJAG00000007514	SNRNP200	97	90.165	Callithrix_jacchus
ENSPMEG00000021166	snrnp200	99	89.272	ENSCAFG00020019979	SNRNP200	99	91.580	Canis_lupus_dingo
ENSPMEG00000021166	snrnp200	99	89.945	ENSCHIG00000020611	SNRNP200	97	89.945	Capra_hircus
ENSPMEG00000021166	snrnp200	99	90.220	ENSTSYG00000010467	SNRNP200	97	90.220	Carlito_syrichta
ENSPMEG00000021166	snrnp200	99	89.753	ENSCAPG00000017234	SNRNP200	98	89.753	Cavia_aperea
ENSPMEG00000021166	snrnp200	99	90.000	ENSCPOG00000006776	SNRNP200	97	90.000	Cavia_porcellus
ENSPMEG00000021166	snrnp200	99	90.165	ENSCCAG00000033962	SNRNP200	97	90.165	Cebus_capucinus
ENSPMEG00000021166	snrnp200	99	90.165	ENSCATG00000015790	SNRNP200	97	90.165	Cercocebus_atys
ENSPMEG00000021166	snrnp200	99	90.000	ENSCLAG00000004116	SNRNP200	97	90.000	Chinchilla_lanigera
ENSPMEG00000021166	snrnp200	99	90.165	ENSCSAG00000017369	SNRNP200	97	90.165	Chlorocebus_sabaeus
ENSPMEG00000021166	snrnp200	74	92.105	ENSCHOG00000012981	-	55	92.105	Choloepus_hoffmanni
ENSPMEG00000021166	snrnp200	99	90.291	ENSCPBG00000022571	SNRNP200	97	90.291	Chrysemys_picta_bellii
ENSPMEG00000021166	snrnp200	99	76.232	ENSCING00000005082	-	97	76.342	Ciona_intestinalis
ENSPMEG00000021166	snrnp200	95	90.023	ENSCANG00000033932	SNRNP200	99	90.023	Colobus_angolensis_palliatus
ENSPMEG00000021166	snrnp200	99	90.165	ENSCGRG00001022610	Snrnp200	97	90.165	Cricetulus_griseus_chok1gshd
ENSPMEG00000021166	snrnp200	99	89.824	ENSCGRG00000016472	Snrnp200	97	89.824	Cricetulus_griseus_crigri
ENSPMEG00000021166	snrnp200	99	95.710	ENSCSEG00000016399	snrnp200	97	95.710	Cynoglossus_semilaevis
ENSPMEG00000021166	snrnp200	99	92.629	ENSCVAG00000017631	snrnp200	97	92.629	Cyprinodon_variegatus
ENSPMEG00000021166	snrnp200	99	94.169	ENSDARG00000077536	snrnp200	97	94.169	Danio_rerio
ENSPMEG00000021166	snrnp200	99	88.681	ENSDNOG00000011227	SNRNP200	97	88.681	Dasypus_novemcinctus
ENSPMEG00000021166	snrnp200	99	87.281	ENSDORG00000005861	Snrnp200	97	87.281	Dipodomys_ordii
ENSPMEG00000021166	snrnp200	99	73.016	FBgn0263599	l(3)72Ab	97	73.016	Drosophila_melanogaster
ENSPMEG00000021166	snrnp200	93	94.375	ENSETEG00000000162	SNRNP200	67	94.375	Echinops_telfairi
ENSPMEG00000021166	snrnp200	83	81.166	ENSEBUG00000016524	snrnp200	95	81.166	Eptatretus_burgeri
ENSPMEG00000021166	snrnp200	99	88.956	ENSEASG00005001884	SNRNP200	97	88.846	Equus_asinus_asinus
ENSPMEG00000021166	snrnp200	99	90.165	ENSECAG00000019675	SNRNP200	97	90.165	Equus_caballus
ENSPMEG00000021166	snrnp200	90	88.802	ENSEEUG00000012178	SNRNP200	89	88.822	Erinaceus_europaeus
ENSPMEG00000021166	snrnp200	99	95.382	ENSELUG00000018948	snrnp200	97	95.382	Esox_lucius
ENSPMEG00000021166	snrnp200	99	90.220	ENSFCAG00000010699	SNRNP200	97	90.220	Felis_catus
ENSPMEG00000021166	snrnp200	93	84.725	ENSFALG00000001368	-	93	84.725	Ficedula_albicollis
ENSPMEG00000021166	snrnp200	99	90.000	ENSFDAG00000004683	SNRNP200	97	90.000	Fukomys_damarensis
ENSPMEG00000021166	snrnp200	99	96.150	ENSFHEG00000003786	snrnp200	97	96.150	Fundulus_heteroclitus
ENSPMEG00000021166	snrnp200	99	94.560	ENSGMOG00000004881	snrnp200	97	94.396	Gadus_morhua
ENSPMEG00000021166	snrnp200	99	96.535	ENSGAFG00000010807	snrnp200	97	96.535	Gambusia_affinis
ENSPMEG00000021166	snrnp200	99	96.760	ENSGACG00000011474	snrnp200	97	96.760	Gasterosteus_aculeatus
ENSPMEG00000021166	snrnp200	91	92.704	ENSGAGG00000016069	SNRNP200	96	90.595	Gopherus_agassizii
ENSPMEG00000021166	snrnp200	99	90.165	ENSGGOG00000005174	SNRNP200	97	92.560	Gorilla_gorilla
ENSPMEG00000021166	snrnp200	99	94.079	ENSHBUG00000011322	snrnp200	99	94.079	Haplochromis_burtoni
ENSPMEG00000021166	snrnp200	99	90.000	ENSHGLG00000006654	SNRNP200	97	90.000	Heterocephalus_glaber_female
ENSPMEG00000021166	snrnp200	99	90.000	ENSHGLG00100018594	SNRNP200	97	90.000	Heterocephalus_glaber_male
ENSPMEG00000021166	snrnp200	99	90.220	ENSSTOG00000016351	SNRNP200	97	90.220	Ictidomys_tridecemlineatus
ENSPMEG00000021166	snrnp200	99	90.000	ENSJJAG00000023659	Snrnp200	97	90.000	Jaculus_jaculus
ENSPMEG00000021166	snrnp200	99	94.411	ENSKMAG00000003665	snrnp200	97	94.411	Kryptolebias_marmoratus
ENSPMEG00000021166	snrnp200	99	97.085	ENSLBEG00000021585	snrnp200	97	97.085	Labrus_bergylta
ENSPMEG00000021166	snrnp200	80	92.084	ENSLACG00000000226	SNRNP200	99	92.084	Latimeria_chalumnae
ENSPMEG00000021166	snrnp200	99	93.407	ENSLOCG00000015198	snrnp200	97	93.407	Lepisosteus_oculatus
ENSPMEG00000021166	snrnp200	99	89.890	ENSLAFG00000015626	SNRNP200	97	89.890	Loxodonta_africana
ENSPMEG00000021166	snrnp200	99	90.110	ENSMFAG00000040174	SNRNP200	99	92.151	Macaca_fascicularis
ENSPMEG00000021166	snrnp200	99	90.110	ENSMMUG00000023261	SNRNP200	97	90.110	Macaca_mulatta
ENSPMEG00000021166	snrnp200	99	90.055	ENSMNEG00000032398	SNRNP200	97	90.055	Macaca_nemestrina
ENSPMEG00000021166	snrnp200	99	90.165	ENSMLEG00000019083	SNRNP200	99	92.151	Mandrillus_leucophaeus
ENSPMEG00000021166	snrnp200	99	96.152	ENSMAMG00000007851	snrnp200	97	96.097	Mastacembelus_armatus
ENSPMEG00000021166	snrnp200	99	94.079	ENSMZEG00005010787	snrnp200	99	94.079	Maylandia_zebra
ENSPMEG00000021166	snrnp200	98	90.233	ENSMGAG00000001831	SNRNP200	99	90.240	Meleagris_gallopavo
ENSPMEG00000021166	snrnp200	99	90.220	ENSMAUG00000011825	Snrnp200	97	90.220	Mesocricetus_auratus
ENSPMEG00000021166	snrnp200	99	90.220	ENSMICG00000004710	SNRNP200	98	91.831	Microcebus_murinus
ENSPMEG00000021166	snrnp200	99	88.132	ENSMOCG00000011814	Snrnp200	97	88.132	Microtus_ochrogaster
ENSPMEG00000021166	snrnp200	99	94.609	ENSMMOG00000014167	snrnp200	97	94.609	Mola_mola
ENSPMEG00000021166	snrnp200	99	90.275	ENSMODG00000008475	SNRNP200	97	90.275	Monodelphis_domestica
ENSPMEG00000021166	snrnp200	99	96.645	ENSMALG00000001973	snrnp200	97	96.645	Monopterus_albus
ENSPMEG00000021166	snrnp200	99	90.110	MGP_CAROLIEiJ_G0024250	Snrnp200	97	90.110	Mus_caroli
ENSPMEG00000021166	snrnp200	99	90.110	ENSMUSG00000003660	Snrnp200	97	90.110	Mus_musculus
ENSPMEG00000021166	snrnp200	99	90.110	MGP_PahariEiJ_G0025695	Snrnp200	97	90.110	Mus_pahari
ENSPMEG00000021166	snrnp200	99	90.110	MGP_SPRETEiJ_G0025170	Snrnp200	96	92.784	Mus_spretus
ENSPMEG00000021166	snrnp200	99	90.165	ENSMPUG00000008949	SNRNP200	97	90.165	Mustela_putorius_furo
ENSPMEG00000021166	snrnp200	99	86.978	ENSMLUG00000027511	-	97	86.978	Myotis_lucifugus
ENSPMEG00000021166	snrnp200	99	89.578	ENSMLUG00000010493	SNRNP200	97	89.578	Myotis_lucifugus
ENSPMEG00000021166	snrnp200	99	90.165	ENSNGAG00000021993	Snrnp200	97	90.165	Nannospalax_galili
ENSPMEG00000021166	snrnp200	91	96.716	ENSNBRG00000017960	snrnp200	97	96.716	Neolamprologus_brichardi
ENSPMEG00000021166	snrnp200	99	85.177	ENSNLEG00000000025	SNRNP200	97	85.232	Nomascus_leucogenys
ENSPMEG00000021166	snrnp200	99	89.103	ENSMEUG00000010532	SNRNP200	71	89.103	Notamacropus_eugenii
ENSPMEG00000021166	snrnp200	97	89.056	ENSOPRG00000015464	SNRNP200	96	89.069	Ochotona_princeps
ENSPMEG00000021166	snrnp200	99	89.945	ENSODEG00000008366	SNRNP200	97	89.945	Octodon_degus
ENSPMEG00000021166	snrnp200	99	96.920	ENSONIG00000010714	snrnp200	97	96.920	Oreochromis_niloticus
ENSPMEG00000021166	snrnp200	99	90.110	ENSOCUG00000009864	SNRNP200	97	90.110	Oryctolagus_cuniculus
ENSPMEG00000021166	snrnp200	99	96.315	ENSORLG00000012286	snrnp200	99	96.473	Oryzias_latipes
ENSPMEG00000021166	snrnp200	99	96.425	ENSORLG00020004648	snrnp200	97	96.425	Oryzias_latipes_hni
ENSPMEG00000021166	snrnp200	99	96.315	ENSORLG00015019114	snrnp200	99	96.307	Oryzias_latipes_hsok
ENSPMEG00000021166	snrnp200	99	96.480	ENSOMEG00000011834	snrnp200	97	96.480	Oryzias_melastigma
ENSPMEG00000021166	snrnp200	99	90.220	ENSOGAG00000006879	SNRNP200	97	90.220	Otolemur_garnettii
ENSPMEG00000021166	snrnp200	99	89.621	ENSOARG00000013949	SNRNP200	97	89.621	Ovis_aries
ENSPMEG00000021166	snrnp200	99	90.165	ENSPPAG00000041559	SNRNP200	97	90.165	Pan_paniscus
ENSPMEG00000021166	snrnp200	99	90.220	ENSPPRG00000004435	SNRNP200	97	90.220	Panthera_pardus
ENSPMEG00000021166	snrnp200	99	89.725	ENSPTIG00000006380	SNRNP200	97	89.725	Panthera_tigris_altaica
ENSPMEG00000021166	snrnp200	99	90.165	ENSPTRG00000012230	SNRNP200	97	90.165	Pan_troglodytes
ENSPMEG00000021166	snrnp200	99	90.110	ENSPANG00000006017	SNRNP200	97	90.110	Papio_anubis
ENSPMEG00000021166	snrnp200	99	94.557	ENSPKIG00000014762	snrnp200	99	94.740	Paramormyrops_kingsleyae
ENSPMEG00000021166	snrnp200	99	89.292	ENSPSIG00000008580	SNRNP200	97	89.292	Pelodiscus_sinensis
ENSPMEG00000021166	snrnp200	99	90.055	ENSPCIG00000023050	SNRNP200	97	90.055	Phascolarctos_cinereus
ENSPMEG00000021166	snrnp200	99	99.615	ENSPFOG00000015110	snrnp200	97	99.615	Poecilia_formosa
ENSPMEG00000021166	snrnp200	100	99.565	ENSPLAG00000006711	snrnp200	100	99.565	Poecilia_latipinna
ENSPMEG00000021166	snrnp200	99	99.395	ENSPREG00000008875	snrnp200	97	99.395	Poecilia_reticulata
ENSPMEG00000021166	snrnp200	99	90.165	ENSPPYG00000012068	SNRNP200	97	90.165	Pongo_abelii
ENSPMEG00000021166	snrnp200	96	94.872	ENSPCAG00000008536	SNRNP200	83	94.872	Procavia_capensis
ENSPMEG00000021166	snrnp200	99	90.165	ENSPCOG00000024608	SNRNP200	97	90.165	Propithecus_coquereli
ENSPMEG00000021166	snrnp200	94	90.028	ENSPVAG00000005860	SNRNP200	89	90.028	Pteropus_vampyrus
ENSPMEG00000021166	snrnp200	99	91.283	ENSPNYG00000017476	snrnp200	97	91.283	Pundamilia_nyererei
ENSPMEG00000021166	snrnp200	99	88.840	ENSPNAG00000010998	snrnp200	97	88.840	Pygocentrus_nattereri
ENSPMEG00000021166	snrnp200	99	90.220	ENSRNOG00000012157	Snrnp200	97	90.220	Rattus_norvegicus
ENSPMEG00000021166	snrnp200	99	90.165	ENSRBIG00000044690	-	97	90.165	Rhinopithecus_bieti
ENSPMEG00000021166	snrnp200	99	90.165	ENSRROG00000037952	-	97	90.165	Rhinopithecus_roxellana
ENSPMEG00000021166	snrnp200	99	90.165	ENSSBOG00000035471	SNRNP200	97	92.330	Saimiri_boliviensis_boliviensis
ENSPMEG00000021166	snrnp200	98	90.067	ENSSHAG00000000758	SNRNP200	99	90.073	Sarcophilus_harrisii
ENSPMEG00000021166	snrnp200	99	94.447	ENSSFOG00015018826	snrnp200	97	94.447	Scleropages_formosus
ENSPMEG00000021166	snrnp200	99	96.755	ENSSMAG00000005463	snrnp200	98	96.755	Scophthalmus_maximus
ENSPMEG00000021166	snrnp200	99	97.360	ENSSDUG00000021410	snrnp200	97	97.360	Seriola_dumerili
ENSPMEG00000021166	snrnp200	99	97.415	ENSSLDG00000010884	snrnp200	97	97.415	Seriola_lalandi_dorsalis
ENSPMEG00000021166	snrnp200	94	86.957	ENSSARG00000010728	SNRNP200	92	86.916	Sorex_araneus
ENSPMEG00000021166	snrnp200	99	90.610	ENSSPUG00000003726	-	97	90.610	Sphenodon_punctatus
ENSPMEG00000021166	snrnp200	99	97.360	ENSSPAG00000001842	snrnp200	98	97.360	Stegastes_partitus
ENSPMEG00000021166	snrnp200	99	90.275	ENSSSCG00000008127	SNRNP200	99	90.275	Sus_scrofa
ENSPMEG00000021166	snrnp200	99	82.371	ENSTGUG00000014475	-	98	82.371	Taeniopygia_guttata
ENSPMEG00000021166	snrnp200	99	95.875	ENSTRUG00000001307	snrnp200	97	95.875	Takifugu_rubripes
ENSPMEG00000021166	snrnp200	99	91.181	ENSTNIG00000004320	snrnp200	97	81.788	Tetraodon_nigroviridis
ENSPMEG00000021166	snrnp200	80	93.897	ENSTBEG00000003329	-	54	93.897	Tupaia_belangeri
ENSPMEG00000021166	snrnp200	99	90.000	ENSTTRG00000004983	SNRNP200	97	90.000	Tursiops_truncatus
ENSPMEG00000021166	snrnp200	85	82.467	ENSUAMG00000008395	-	91	82.467	Ursus_americanus
ENSPMEG00000021166	snrnp200	99	90.220	ENSUMAG00000012385	SNRNP200	97	90.220	Ursus_maritimus
ENSPMEG00000021166	snrnp200	81	94.595	ENSVPAG00000006434	SNRNP200	53	94.595	Vicugna_pacos
ENSPMEG00000021166	snrnp200	99	90.220	ENSVVUG00000026247	SNRNP200	99	90.220	Vulpes_vulpes
ENSPMEG00000021166	snrnp200	99	90.159	ENSXETG00000001243	snrnp200	97	90.159	Xenopus_tropicalis
ENSPMEG00000021166	snrnp200	99	99.450	ENSXMAG00000002058	snrnp200	97	99.450	Xiphophorus_maculatus