EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPMEG00000021212 (Gene tree)
Gene ID: 106925248
Gene Symbol: sbno1
Alias: -
Full Name: strawberry notch homolog 1
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Minus strand
Length: 21804 bases
Position: chrKQ551741.1:47147-68950
Accession: 106925248
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000032971	ResIII	PF04851.15	1.1e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000034143	-	7218	XM_014999438	ENSPMEP00000032971	1405 (aa)	XP_014854924	UPI00072E1D07

Gene Model

Click here to download ENSPMEG00000021212's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000021212's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPMEG00000021212	sbno1	70	65.596	ENSPMEG00000002129	si:ch73-63e15.2	75	64.853

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000021212	sbno1	99	76.104	ENSG00000139697	SBNO1	99	76.093	Homo_sapiens
ENSPMEG00000021212	sbno1	82	94.522	ENSAPOG00000003196	sbno1	98	94.522	Acanthochromis_polyacanthus
ENSPMEG00000021212	sbno1	99	75.994	ENSAMEG00000015151	SBNO1	99	75.913	Ailuropoda_melanoleuca
ENSPMEG00000021212	sbno1	100	86.953	ENSACIG00000008088	sbno1	99	87.165	Amphilophus_citrinellus
ENSPMEG00000021212	sbno1	100	91.613	ENSAOCG00000014859	sbno1	99	91.613	Amphiprion_ocellaris
ENSPMEG00000021212	sbno1	100	91.542	ENSAPEG00000006069	sbno1	99	91.542	Amphiprion_percula
ENSPMEG00000021212	sbno1	100	92.116	ENSATEG00000006667	sbno1	100	92.116	Anabas_testudineus
ENSPMEG00000021212	sbno1	98	76.758	ENSAPLG00000015674	SBNO1	99	76.570	Anas_platyrhynchos
ENSPMEG00000021212	sbno1	98	75.285	ENSACAG00000015441	SBNO1	88	75.105	Anolis_carolinensis
ENSPMEG00000021212	sbno1	95	84.029	ENSANAG00000029958	-	99	83.513	Aotus_nancymaae
ENSPMEG00000021212	sbno1	100	85.267	ENSACLG00000024913	sbno1	100	85.409	Astatotilapia_calliptera
ENSPMEG00000021212	sbno1	100	82.211	ENSAMXG00000019473	sbno1	100	82.778	Astyanax_mexicanus
ENSPMEG00000021212	sbno1	100	76.310	ENSBTAG00000020505	SBNO1	99	76.301	Bos_taurus
ENSPMEG00000021212	sbno1	99	76.388	ENSCJAG00000016599	SBNO1	99	76.144	Callithrix_jacchus
ENSPMEG00000021212	sbno1	99	76.117	ENSCAFG00000007503	SBNO1	99	77.081	Canis_familiaris
ENSPMEG00000021212	sbno1	95	81.149	ENSCAFG00020015363	SBNO1	99	81.329	Canis_lupus_dingo
ENSPMEG00000021212	sbno1	95	83.513	ENSCHIG00000008382	SBNO1	99	83.513	Capra_hircus
ENSPMEG00000021212	sbno1	99	76.104	ENSTSYG00000012749	SBNO1	99	77.477	Carlito_syrichta
ENSPMEG00000021212	sbno1	96	77.379	ENSCAPG00000000384	SBNO1	99	83.662	Cavia_aperea
ENSPMEG00000021212	sbno1	95	83.662	ENSCPOG00000008109	SBNO1	99	83.662	Cavia_porcellus
ENSPMEG00000021212	sbno1	99	72.121	ENSCCAG00000035316	SBNO1	99	72.401	Cebus_capucinus
ENSPMEG00000021212	sbno1	99	76.085	ENSCATG00000008239	SBNO1	99	83.842	Cercocebus_atys
ENSPMEG00000021212	sbno1	95	83.662	ENSCLAG00000008995	SBNO1	99	83.662	Chinchilla_lanigera
ENSPMEG00000021212	sbno1	82	82.464	ENSCSAG00000002064	SBNO1	99	82.530	Chlorocebus_sabaeus
ENSPMEG00000021212	sbno1	96	73.650	ENSCHOG00000008814	SBNO1	96	73.521	Choloepus_hoffmanni
ENSPMEG00000021212	sbno1	98	76.259	ENSCPBG00000025968	SBNO1	99	75.796	Chrysemys_picta_bellii
ENSPMEG00000021212	sbno1	99	72.390	ENSCANG00000042688	-	99	72.343	Colobus_angolensis_palliatus
ENSPMEG00000021212	sbno1	95	82.437	ENSCGRG00001017470	Sbno1	99	82.437	Cricetulus_griseus_chok1gshd
ENSPMEG00000021212	sbno1	95	82.437	ENSCGRG00000004756	Sbno1	99	82.437	Cricetulus_griseus_crigri
ENSPMEG00000021212	sbno1	100	88.131	ENSCSEG00000011919	sbno1	100	88.060	Cynoglossus_semilaevis
ENSPMEG00000021212	sbno1	100	95.661	ENSCVAG00000007038	sbno1	100	95.448	Cyprinodon_variegatus
ENSPMEG00000021212	sbno1	99	82.550	ENSDARG00000099080	sbno1	99	82.646	Danio_rerio
ENSPMEG00000021212	sbno1	99	78.707	ENSDNOG00000017147	SBNO1	96	78.707	Dasypus_novemcinctus
ENSPMEG00000021212	sbno1	99	71.409	ENSDORG00000015261	Sbno1	99	81.278	Dipodomys_ordii
ENSPMEG00000021212	sbno1	93	72.642	ENSETEG00000005620	SBNO1	93	72.642	Echinops_telfairi
ENSPMEG00000021212	sbno1	75	62.488	ENSEBUG00000013823	sbno1	93	61.694	Eptatretus_burgeri
ENSPMEG00000021212	sbno1	51	73.315	ENSEASG00005012595	-	92	73.793	Equus_asinus_asinus
ENSPMEG00000021212	sbno1	99	76.294	ENSECAG00000006127	SBNO1	99	76.979	Equus_caballus
ENSPMEG00000021212	sbno1	81	77.596	ENSEEUG00000003793	SBNO1	82	77.596	Erinaceus_europaeus
ENSPMEG00000021212	sbno1	100	83.357	ENSELUG00000002886	sbno1	99	83.144	Esox_lucius
ENSPMEG00000021212	sbno1	99	76.104	ENSFCAG00000015331	SBNO1	99	76.073	Felis_catus
ENSPMEG00000021212	sbno1	98	76.973	ENSFALG00000009273	SBNO1	99	76.641	Ficedula_albicollis
ENSPMEG00000021212	sbno1	95	81.159	ENSFDAG00000014232	SBNO1	99	80.610	Fukomys_damarensis
ENSPMEG00000021212	sbno1	100	95.590	ENSFHEG00000007360	sbno1	100	95.377	Fundulus_heteroclitus
ENSPMEG00000021212	sbno1	94	85.811	ENSGMOG00000018229	sbno1	99	85.746	Gadus_morhua
ENSPMEG00000021212	sbno1	88	77.009	ENSGALG00000003392	SBNO1	99	76.874	Gallus_gallus
ENSPMEG00000021212	sbno1	100	98.577	ENSGAFG00000003960	sbno1	100	98.577	Gambusia_affinis
ENSPMEG00000021212	sbno1	95	89.497	ENSGACG00000015633	sbno1	100	89.347	Gasterosteus_aculeatus
ENSPMEG00000021212	sbno1	98	75.681	ENSGAGG00000001065	SBNO1	99	83.039	Gopherus_agassizii
ENSPMEG00000021212	sbno1	95	83.662	ENSGGOG00000015000	SBNO1	99	83.662	Gorilla_gorilla
ENSPMEG00000021212	sbno1	100	79.190	ENSHBUG00000011910	sbno1	100	79.261	Haplochromis_burtoni
ENSPMEG00000021212	sbno1	95	84.392	ENSHGLG00000014165	-	99	83.993	Heterocephalus_glaber_female
ENSPMEG00000021212	sbno1	92	92.277	ENSHCOG00000003246	sbno1	95	92.277	Hippocampus_comes
ENSPMEG00000021212	sbno1	100	82.320	ENSIPUG00000015830	Sbno1	98	83.049	Ictalurus_punctatus
ENSPMEG00000021212	sbno1	95	83.662	ENSSTOG00000023221	SBNO1	99	83.662	Ictidomys_tridecemlineatus
ENSPMEG00000021212	sbno1	99	76.084	ENSJJAG00000001741	Sbno1	99	79.892	Jaculus_jaculus
ENSPMEG00000021212	sbno1	99	93.652	ENSKMAG00000009696	sbno1	99	93.652	Kryptolebias_marmoratus
ENSPMEG00000021212	sbno1	100	89.369	ENSLBEG00000007623	sbno1	100	89.511	Labrus_bergylta
ENSPMEG00000021212	sbno1	100	72.734	ENSLACG00000017227	SBNO1	99	74.801	Latimeria_chalumnae
ENSPMEG00000021212	sbno1	100	81.844	ENSLOCG00000005725	sbno1	97	81.422	Lepisosteus_oculatus
ENSPMEG00000021212	sbno1	99	75.734	ENSLAFG00000002135	SBNO1	99	75.721	Loxodonta_africana
ENSPMEG00000021212	sbno1	95	80.462	ENSMFAG00000031429	SBNO1	99	80.462	Macaca_fascicularis
ENSPMEG00000021212	sbno1	95	80.462	ENSMMUG00000011496	SBNO1	99	80.462	Macaca_mulatta
ENSPMEG00000021212	sbno1	95	83.662	ENSMLEG00000033260	SBNO1	99	83.662	Mandrillus_leucophaeus
ENSPMEG00000021212	sbno1	100	91.601	ENSMAMG00000005473	sbno1	100	91.388	Mastacembelus_armatus
ENSPMEG00000021212	sbno1	98	77.155	ENSMGAG00000003274	SBNO1	99	76.820	Meleagris_gallopavo
ENSPMEG00000021212	sbno1	50	74.574	ENSMAUG00000004834	-	98	74.822	Mesocricetus_auratus
ENSPMEG00000021212	sbno1	95	81.125	ENSMICG00000006573	-	99	80.645	Microcebus_murinus
ENSPMEG00000021212	sbno1	95	83.154	ENSMOCG00000009390	Sbno1	99	83.154	Microtus_ochrogaster
ENSPMEG00000021212	sbno1	100	83.582	ENSMMOG00000008691	sbno1	99	84.375	Mola_mola
ENSPMEG00000021212	sbno1	99	75.930	ENSMODG00000012470	SBNO1	98	76.147	Monodelphis_domestica
ENSPMEG00000021212	sbno1	100	90.341	ENSMALG00000001056	sbno1	100	90.341	Monopterus_albus
ENSPMEG00000021212	sbno1	99	75.719	MGP_CAROLIEiJ_G0027749	Sbno1	95	91.667	Mus_caroli
ENSPMEG00000021212	sbno1	99	75.806	ENSMUSG00000038095	Sbno1	94	91.667	Mus_musculus
ENSPMEG00000021212	sbno1	99	76.412	MGP_PahariEiJ_G0024329	Sbno1	95	91.667	Mus_pahari
ENSPMEG00000021212	sbno1	99	75.736	MGP_SPRETEiJ_G0028747	Sbno1	95	91.667	Mus_spretus
ENSPMEG00000021212	sbno1	99	76.244	ENSMPUG00000001658	SBNO1	99	76.093	Mustela_putorius_furo
ENSPMEG00000021212	sbno1	99	76.107	ENSMLUG00000017159	SBNO1	99	75.862	Myotis_lucifugus
ENSPMEG00000021212	sbno1	92	84.570	ENSNGAG00000012620	Sbno1	98	84.570	Nannospalax_galili
ENSPMEG00000021212	sbno1	100	86.263	ENSNBRG00000019189	sbno1	100	86.335	Neolamprologus_brichardi
ENSPMEG00000021212	sbno1	99	73.319	ENSNLEG00000001502	SBNO1	99	75.763	Nomascus_leucogenys
ENSPMEG00000021212	sbno1	62	73.585	ENSMEUG00000008768	-	93	74.214	Notamacropus_eugenii
ENSPMEG00000021212	sbno1	99	75.545	ENSOPRG00000011054	SBNO1	99	75.932	Ochotona_princeps
ENSPMEG00000021212	sbno1	95	83.842	ENSODEG00000009997	SBNO1	99	83.842	Octodon_degus
ENSPMEG00000021212	sbno1	100	90.554	ENSONIG00000015348	sbno1	100	90.625	Oreochromis_niloticus
ENSPMEG00000021212	sbno1	98	75.391	ENSOCUG00000002441	SBNO1	95	75.304	Oryctolagus_cuniculus
ENSPMEG00000021212	sbno1	100	89.702	ENSORLG00000001593	sbno1	100	89.702	Oryzias_latipes
ENSPMEG00000021212	sbno1	100	90.121	ENSORLG00020015216	sbno1	100	90.192	Oryzias_latipes_hni
ENSPMEG00000021212	sbno1	100	89.979	ENSORLG00015002726	sbno1	100	90.050	Oryzias_latipes_hsok
ENSPMEG00000021212	sbno1	100	89.260	ENSOMEG00000019313	sbno1	100	89.331	Oryzias_melastigma
ENSPMEG00000021212	sbno1	50	72.585	ENSOGAG00000010781	-	98	73.077	Otolemur_garnettii
ENSPMEG00000021212	sbno1	100	75.840	ENSOARG00000004404	SBNO1	99	76.144	Ovis_aries
ENSPMEG00000021212	sbno1	95	83.662	ENSPPAG00000024635	SBNO1	99	83.662	Pan_paniscus
ENSPMEG00000021212	sbno1	99	76.104	ENSPPRG00000022092	SBNO1	99	76.073	Panthera_pardus
ENSPMEG00000021212	sbno1	99	76.124	ENSPTIG00000017803	SBNO1	99	76.093	Panthera_tigris_altaica
ENSPMEG00000021212	sbno1	95	83.662	ENSPTRG00000005597	SBNO1	99	83.662	Pan_troglodytes
ENSPMEG00000021212	sbno1	95	83.662	ENSPANG00000011640	SBNO1	99	83.662	Papio_anubis
ENSPMEG00000021212	sbno1	100	81.201	ENSPKIG00000001441	sbno1	100	80.946	Paramormyrops_kingsleyae
ENSPMEG00000021212	sbno1	92	73.288	ENSPSIG00000009256	-	99	73.282	Pelodiscus_sinensis
ENSPMEG00000021212	sbno1	98	76.057	ENSPSIG00000009572	-	99	75.828	Pelodiscus_sinensis
ENSPMEG00000021212	sbno1	95	82.975	ENSPEMG00000016087	Sbno1	99	82.975	Peromyscus_maniculatus_bairdii
ENSPMEG00000021212	sbno1	99	76.110	ENSPCIG00000010985	SBNO1	99	76.234	Phascolarctos_cinereus
ENSPMEG00000021212	sbno1	100	99.858	ENSPFOG00000005069	sbno1	100	99.858	Poecilia_formosa
ENSPMEG00000021212	sbno1	100	99.573	ENSPLAG00000015015	sbno1	100	99.573	Poecilia_latipinna
ENSPMEG00000021212	sbno1	100	98.861	ENSPREG00000017746	sbno1	100	98.861	Poecilia_reticulata
ENSPMEG00000021212	sbno1	99	76.087	ENSPPYG00000005084	SBNO1	99	76.147	Pongo_abelii
ENSPMEG00000021212	sbno1	89	69.629	ENSPCAG00000008634	SBNO1	88	69.200	Procavia_capensis
ENSPMEG00000021212	sbno1	95	83.971	ENSPCOG00000024277	SBNO1	99	83.971	Propithecus_coquereli
ENSPMEG00000021212	sbno1	87	84.095	ENSPVAG00000015304	SBNO1	87	84.095	Pteropus_vampyrus
ENSPMEG00000021212	sbno1	100	90.412	ENSPNYG00000004291	sbno1	100	90.483	Pundamilia_nyererei
ENSPMEG00000021212	sbno1	100	82.365	ENSPNAG00000015622	sbno1	100	82.011	Pygocentrus_nattereri
ENSPMEG00000021212	sbno1	95	83.154	ENSRNOG00000001064	Sbno1	99	83.303	Rattus_norvegicus
ENSPMEG00000021212	sbno1	95	83.662	ENSRROG00000034230	SBNO1	99	83.662	Rhinopithecus_roxellana
ENSPMEG00000021212	sbno1	97	74.142	ENSSBOG00000015422	SBNO1	99	74.015	Saimiri_boliviensis_boliviensis
ENSPMEG00000021212	sbno1	100	81.876	ENSSFOG00015019025	sbno1	100	81.709	Scleropages_formosus
ENSPMEG00000021212	sbno1	100	90.612	ENSSMAG00000013640	sbno1	100	90.612	Scophthalmus_maximus
ENSPMEG00000021212	sbno1	100	92.259	ENSSDUG00000023480	sbno1	100	92.259	Seriola_dumerili
ENSPMEG00000021212	sbno1	100	92.116	ENSSLDG00000007928	sbno1	100	92.116	Seriola_lalandi_dorsalis
ENSPMEG00000021212	sbno1	89	81.290	ENSSARG00000002594	SBNO1	89	81.129	Sorex_araneus
ENSPMEG00000021212	sbno1	98	76.263	ENSSPUG00000012640	SBNO1	99	75.762	Sphenodon_punctatus
ENSPMEG00000021212	sbno1	100	92.188	ENSSPAG00000016244	sbno1	100	92.188	Stegastes_partitus
ENSPMEG00000021212	sbno1	99	76.104	ENSSSCG00000009776	SBNO1	99	76.023	Sus_scrofa
ENSPMEG00000021212	sbno1	98	76.652	ENSTGUG00000005380	SBNO1	99	76.500	Taeniopygia_guttata
ENSPMEG00000021212	sbno1	99	86.700	ENSTRUG00000018490	sbno1	99	86.771	Takifugu_rubripes
ENSPMEG00000021212	sbno1	57	83.416	ENSTNIG00000013506	sbno1	99	83.438	Tetraodon_nigroviridis
ENSPMEG00000021212	sbno1	99	76.224	ENSUAMG00000019671	SBNO1	99	76.073	Ursus_americanus
ENSPMEG00000021212	sbno1	99	76.224	ENSUMAG00000004002	SBNO1	99	76.073	Ursus_maritimus
ENSPMEG00000021212	sbno1	95	73.333	ENSVPAG00000007024	SBNO1	95	73.333	Vicugna_pacos
ENSPMEG00000021212	sbno1	99	76.224	ENSVVUG00000027807	SBNO1	99	76.073	Vulpes_vulpes
ENSPMEG00000021212	sbno1	99	73.179	ENSXETG00000031930	SBNO1	99	72.753	Xenopus_tropicalis
ENSPMEG00000021212	sbno1	89	94.476	ENSXCOG00000011607	sbno1	99	93.875	Xiphophorus_couchianus
ENSPMEG00000021212	sbno1	100	98.577	ENSXMAG00000002140	sbno1	100	98.577	Xiphophorus_maculatus