EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMEG00000021555 (Gene tree)
Gene ID: -
Gene Symbol: CPSF3 (1 of many)
Alias: -
Full Name: cleavage and polyadenylation specific factor 3
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Minus strand
Length: 2856 bases
Position: chrKQ552010.1:87410-90265
Accession: 2326
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000018599	Beta-Casp	PF10996.8	1.5e-19	1	1
ENSPMEP00000018599	RMMBL	PF07521.12	5.5e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000027769	CPSF3 (1 of many)-201	1047	-	ENSPMEP00000018599	254 (aa)	-	-

Gene Model

Click here to download ENSPMEG00000021555's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000021555's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000021555	CPSF3	88	75.893	ENSFHEG00000012186	CPSF3	50	75.893	Fundulus_heteroclitus
ENSPMEG00000021555	CPSF3	88	97.768	ENSHBUG00000014332	CPSF3	56	97.768	Haplochromis_burtoni
ENSPMEG00000021555	CPSF3	88	93.304	ENSLBEG00000015018	-	60	93.304	Labrus_bergylta
ENSPMEG00000021555	CPSF3	76	92.268	ENSMAUG00000000166	Cpsf3	52	92.268	Mesocricetus_auratus
ENSPMEG00000021555	CPSF3	94	90.795	ENSPMGG00000015311	CPSF3	60	90.795	Periophthalmus_magnuspinnatus
ENSPMEG00000021555	CPSF3	88	99.554	ENSPLAG00000021300	-	55	99.554	Poecilia_latipinna
ENSPMEG00000021555	CPSF3	96	91.020	ENSTRUG00000013905	CPSF3	67	91.020	Takifugu_rubripes
ENSPMEG00000021555	CPSF3	87	95.045	ENSTRUG00000007030	cpsf3	54	95.045	Takifugu_rubripes