EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMEG00000021871 (Gene tree)
Gene ID: 106906273
Gene Symbol: rrp12
Alias: -
Full Name: ribosomal RNA processing 12 homolog
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Plus strand
Length: 12571 bases
Position: chrKQ553293.1:54693-67263
Accession: 106906273
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000018767	NUC173	PF08161.12	5.1e-74	1	1
ENSPMEP00000018749	NUC173	PF08161.12	5.1e-74	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000027977	-	4929	XM_014971471	ENSPMEP00000018767	1290 (aa)	XP_014826957	UPI00072ED320
ENSPMET00000034335	-	3864	-	ENSPMEP00000018749	1287 (aa)	-	-

Gene Model

Click here to download ENSPMEG00000021871's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000021871's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000021871	rrp12	92	76.316	ENSG00000052749	RRP12	100	77.273	Homo_sapiens
ENSPMEG00000021871	rrp12	99	85.016	ENSAPOG00000013355	rrp12	99	85.070	Acanthochromis_polyacanthus
ENSPMEG00000021871	rrp12	99	63.566	ENSAMEG00000000134	RRP12	99	64.037	Ailuropoda_melanoleuca
ENSPMEG00000021871	rrp12	99	87.588	ENSACIG00000022673	rrp12	99	87.588	Amphilophus_citrinellus
ENSPMEG00000021871	rrp12	99	87.666	ENSAOCG00000016149	rrp12	99	87.666	Amphiprion_ocellaris
ENSPMEG00000021871	rrp12	99	86.148	ENSAPEG00000016023	rrp12	99	86.148	Amphiprion_percula
ENSPMEG00000021871	rrp12	99	86.672	ENSATEG00000022627	rrp12	99	86.672	Anabas_testudineus
ENSPMEG00000021871	rrp12	97	60.191	ENSAPLG00000014387	RRP12	99	60.545	Anas_platyrhynchos
ENSPMEG00000021871	rrp12	99	59.196	ENSACAG00000002175	RRP12	99	59.207	Anolis_carolinensis
ENSPMEG00000021871	rrp12	92	75.658	ENSANAG00000037485	RRP12	99	75.658	Aotus_nancymaae
ENSPMEG00000021871	rrp12	99	85.792	ENSACLG00000007354	rrp12	99	85.792	Astatotilapia_calliptera
ENSPMEG00000021871	rrp12	99	75.776	ENSAMXG00000012852	rrp12	99	75.859	Astyanax_mexicanus
ENSPMEG00000021871	rrp12	99	63.154	ENSBTAG00000002191	RRP12	99	63.362	Bos_taurus
ENSPMEG00000021871	rrp12	85	61.000	ENSCJAG00000016549	-	99	61.461	Callithrix_jacchus
ENSPMEG00000021871	rrp12	99	63.420	ENSCAFG00000009043	RRP12	99	63.573	Canis_familiaris
ENSPMEG00000021871	rrp12	99	63.420	ENSCAFG00020005991	RRP12	99	63.573	Canis_lupus_dingo
ENSPMEG00000021871	rrp12	99	60.856	ENSCHIG00000011876	RRP12	99	60.816	Capra_hircus
ENSPMEG00000021871	rrp12	53	56.034	ENSTSYG00000030210	-	98	56.667	Carlito_syrichta
ENSPMEG00000021871	rrp12	97	57.735	ENSCAPG00000008991	RRP12	97	57.878	Cavia_aperea
ENSPMEG00000021871	rrp12	100	63.202	ENSCPOG00000004215	RRP12	99	63.460	Cavia_porcellus
ENSPMEG00000021871	rrp12	70	58.352	ENSCCAG00000033123	-	82	58.590	Cebus_capucinus
ENSPMEG00000021871	rrp12	79	66.519	ENSCCAG00000024088	RRP12	99	67.939	Cebus_capucinus
ENSPMEG00000021871	rrp12	99	59.601	ENSCATG00000045310	RRP12	99	59.876	Cercocebus_atys
ENSPMEG00000021871	rrp12	100	62.769	ENSCLAG00000003753	RRP12	99	63.178	Chinchilla_lanigera
ENSPMEG00000021871	rrp12	88	61.652	ENSCSAG00000005877	RRP12	99	61.984	Chlorocebus_sabaeus
ENSPMEG00000021871	rrp12	59	70.903	ENSCHOG00000003095	-	60	70.903	Choloepus_hoffmanni
ENSPMEG00000021871	rrp12	94	65.404	ENSCPBG00000011935	RRP12	97	65.589	Chrysemys_picta_bellii
ENSPMEG00000021871	rrp12	64	40.071	ENSCSAVG00000006059	-	99	40.528	Ciona_savignyi
ENSPMEG00000021871	rrp12	92	76.316	ENSCANG00000031653	RRP12	99	64.109	Colobus_angolensis_palliatus
ENSPMEG00000021871	rrp12	90	63.279	ENSCGRG00001004338	Rrp12	99	63.636	Cricetulus_griseus_chok1gshd
ENSPMEG00000021871	rrp12	99	62.983	ENSCGRG00000011965	Rrp12	99	63.305	Cricetulus_griseus_crigri
ENSPMEG00000021871	rrp12	99	82.636	ENSCSEG00000007799	rrp12	99	82.995	Cynoglossus_semilaevis
ENSPMEG00000021871	rrp12	99	92.422	ENSCVAG00000003418	rrp12	99	92.500	Cyprinodon_variegatus
ENSPMEG00000021871	rrp12	99	73.354	ENSDARG00000022410	rrp12	99	73.791	Danio_rerio
ENSPMEG00000021871	rrp12	99	62.818	ENSDNOG00000005120	RRP12	99	62.877	Dasypus_novemcinctus
ENSPMEG00000021871	rrp12	99	62.855	ENSDORG00000009199	Rrp12	99	63.932	Dipodomys_ordii
ENSPMEG00000021871	rrp12	93	58.889	ENSETEG00000002455	RRP12	92	67.143	Echinops_telfairi
ENSPMEG00000021871	rrp12	91	60.000	ENSEBUG00000006555	rrp12	99	71.795	Eptatretus_burgeri
ENSPMEG00000021871	rrp12	99	63.636	ENSEASG00005008693	RRP12	99	64.081	Equus_asinus_asinus
ENSPMEG00000021871	rrp12	94	63.361	ENSECAG00000010892	RRP12	99	63.914	Equus_caballus
ENSPMEG00000021871	rrp12	69	52.235	ENSEEUG00000005447	-	65	57.941	Erinaceus_europaeus
ENSPMEG00000021871	rrp12	99	77.537	ENSELUG00000010510	rrp12	100	77.561	Esox_lucius
ENSPMEG00000021871	rrp12	92	76.316	ENSFCAG00000028639	RRP12	99	64.087	Felis_catus
ENSPMEG00000021871	rrp12	94	63.300	ENSFALG00000008458	RRP12	99	63.825	Ficedula_albicollis
ENSPMEG00000021871	rrp12	99	63.048	ENSFDAG00000019108	RRP12	95	63.333	Fukomys_damarensis
ENSPMEG00000021871	rrp12	99	82.995	ENSFHEG00000004148	rrp12	99	82.527	Fundulus_heteroclitus
ENSPMEG00000021871	rrp12	99	70.325	ENSGMOG00000004188	rrp12	99	70.895	Gadus_morhua
ENSPMEG00000021871	rrp12	99	63.657	ENSGALG00000041331	RRP12	96	64.902	Gallus_gallus
ENSPMEG00000021871	rrp12	100	96.899	ENSGAFG00000009038	rrp12	100	96.899	Gambusia_affinis
ENSPMEG00000021871	rrp12	99	83.607	ENSGACG00000007175	rrp12	99	83.607	Gasterosteus_aculeatus
ENSPMEG00000021871	rrp12	67	67.705	ENSGAGG00000019169	RRP12	96	67.705	Gopherus_agassizii
ENSPMEG00000021871	rrp12	92	76.316	ENSGGOG00000014850	RRP12	99	64.059	Gorilla_gorilla
ENSPMEG00000021871	rrp12	99	86.183	ENSHBUG00000023527	rrp12	99	86.183	Haplochromis_burtoni
ENSPMEG00000021871	rrp12	99	63.251	ENSHGLG00000016772	RRP12	99	63.538	Heterocephalus_glaber_female
ENSPMEG00000021871	rrp12	99	63.251	ENSHGLG00100015110	RRP12	99	63.538	Heterocephalus_glaber_male
ENSPMEG00000021871	rrp12	100	80.093	ENSHCOG00000019519	rrp12	99	80.172	Hippocampus_comes
ENSPMEG00000021871	rrp12	100	74.381	ENSIPUG00000000311	RRP12	99	74.493	Ictalurus_punctatus
ENSPMEG00000021871	rrp12	99	64.330	ENSSTOG00000006515	RRP12	99	64.546	Ictidomys_tridecemlineatus
ENSPMEG00000021871	rrp12	96	62.910	ENSJJAG00000000110	Rrp12	98	63.205	Jaculus_jaculus
ENSPMEG00000021871	rrp12	99	88.212	ENSKMAG00000020621	rrp12	99	88.212	Kryptolebias_marmoratus
ENSPMEG00000021871	rrp12	99	80.838	ENSLBEG00000015335	rrp12	99	81.421	Labrus_bergylta
ENSPMEG00000021871	rrp12	72	64.312	ENSLACG00000016633	RRP12	82	64.312	Latimeria_chalumnae
ENSPMEG00000021871	rrp12	100	70.291	ENSLOCG00000003846	rrp12	99	70.293	Lepisosteus_oculatus
ENSPMEG00000021871	rrp12	99	63.594	ENSLAFG00000015965	RRP12	99	63.650	Loxodonta_africana
ENSPMEG00000021871	rrp12	92	75.658	ENSMFAG00000041558	RRP12	99	64.031	Macaca_fascicularis
ENSPMEG00000021871	rrp12	92	75.658	ENSMMUG00000019634	RRP12	99	64.031	Macaca_mulatta
ENSPMEG00000021871	rrp12	92	75.658	ENSMNEG00000036759	RRP12	99	61.163	Macaca_nemestrina
ENSPMEG00000021871	rrp12	92	76.316	ENSMLEG00000041317	RRP12	99	61.213	Mandrillus_leucophaeus
ENSPMEG00000021871	rrp12	99	83.750	ENSMAMG00000002964	rrp12	99	86.273	Mastacembelus_armatus
ENSPMEG00000021871	rrp12	99	85.870	ENSMZEG00005003241	rrp12	99	85.870	Maylandia_zebra
ENSPMEG00000021871	rrp12	99	61.556	ENSMGAG00000009829	RRP12	99	61.831	Meleagris_gallopavo
ENSPMEG00000021871	rrp12	99	60.742	ENSMAUG00000020743	Rrp12	99	60.870	Mesocricetus_auratus
ENSPMEG00000021871	rrp12	99	63.587	ENSMICG00000007624	RRP12	99	63.953	Microcebus_murinus
ENSPMEG00000021871	rrp12	100	63.510	ENSMOCG00000006753	Rrp12	99	63.953	Microtus_ochrogaster
ENSPMEG00000021871	rrp12	100	82.417	ENSMMOG00000010708	rrp12	99	82.670	Mola_mola
ENSPMEG00000021871	rrp12	99	64.346	ENSMODG00000004315	RRP12	99	64.541	Monodelphis_domestica
ENSPMEG00000021871	rrp12	99	80.000	ENSMALG00000016560	rrp12	99	85.304	Monopterus_albus
ENSPMEG00000021871	rrp12	99	62.787	MGP_CAROLIEiJ_G0022957	Rrp12	99	62.992	Mus_caroli
ENSPMEG00000021871	rrp12	99	63.636	ENSMUSG00000035049	Rrp12	99	63.848	Mus_musculus
ENSPMEG00000021871	rrp12	100	63.510	MGP_PahariEiJ_G0014447	Rrp12	99	63.848	Mus_pahari
ENSPMEG00000021871	rrp12	99	63.713	MGP_SPRETEiJ_G0023878	Rrp12	99	63.926	Mus_spretus
ENSPMEG00000021871	rrp12	99	63.385	ENSMPUG00000017046	RRP12	99	63.672	Mustela_putorius_furo
ENSPMEG00000021871	rrp12	99	63.699	ENSMLUG00000017160	RRP12	99	64.015	Myotis_lucifugus
ENSPMEG00000021871	rrp12	99	63.867	ENSNGAG00000024144	Rrp12	99	64.081	Nannospalax_galili
ENSPMEG00000021871	rrp12	99	84.465	ENSNBRG00000009987	rrp12	99	84.465	Neolamprologus_brichardi
ENSPMEG00000021871	rrp12	99	55.556	ENSNLEG00000013762	RRP12	99	55.944	Nomascus_leucogenys
ENSPMEG00000021871	rrp12	100	58.546	ENSMEUG00000003185	RRP12	99	59.080	Notamacropus_eugenii
ENSPMEG00000021871	rrp12	94	67.726	ENSOPRG00000005001	RRP12	93	67.726	Ochotona_princeps
ENSPMEG00000021871	rrp12	100	62.954	ENSODEG00000016439	RRP12	99	63.133	Octodon_degus
ENSPMEG00000021871	rrp12	99	86.495	ENSONIG00000009528	rrp12	99	86.495	Oreochromis_niloticus
ENSPMEG00000021871	rrp12	100	59.632	ENSOANG00000006560	RRP12	99	59.783	Ornithorhynchus_anatinus
ENSPMEG00000021871	rrp12	99	62.809	ENSOCUG00000005662	RRP12	99	63.665	Oryctolagus_cuniculus
ENSPMEG00000021871	rrp12	99	85.636	ENSORLG00000008688	rrp12	99	85.775	Oryzias_latipes
ENSPMEG00000021871	rrp12	97	86.248	ENSORLG00020002355	rrp12	99	86.248	Oryzias_latipes_hni
ENSPMEG00000021871	rrp12	99	85.714	ENSORLG00015006709	rrp12	99	85.714	Oryzias_latipes_hsok
ENSPMEG00000021871	rrp12	97	86.248	ENSOMEG00000002609	rrp12	99	86.248	Oryzias_melastigma
ENSPMEG00000021871	rrp12	99	62.826	ENSOGAG00000001626	RRP12	99	62.877	Otolemur_garnettii
ENSPMEG00000021871	rrp12	99	62.442	ENSOARG00000009681	RRP12	99	62.645	Ovis_aries
ENSPMEG00000021871	rrp12	92	76.316	ENSPPAG00000043885	RRP12	99	62.208	Pan_paniscus
ENSPMEG00000021871	rrp12	92	75.658	ENSPPRG00000002029	RRP12	99	63.932	Panthera_pardus
ENSPMEG00000021871	rrp12	92	76.316	ENSPTIG00000004428	RRP12	99	61.191	Panthera_tigris_altaica
ENSPMEG00000021871	rrp12	92	76.316	ENSPTRG00000002806	RRP12	99	62.208	Pan_troglodytes
ENSPMEG00000021871	rrp12	92	76.316	ENSPANG00000021360	RRP12	99	64.264	Papio_anubis
ENSPMEG00000021871	rrp12	100	73.477	ENSPKIG00000016516	rrp12	99	73.660	Paramormyrops_kingsleyae
ENSPMEG00000021871	rrp12	99	81.357	ENSPMGG00000020217	rrp12	99	81.045	Periophthalmus_magnuspinnatus
ENSPMEG00000021871	rrp12	100	63.923	ENSPEMG00000008437	Rrp12	99	64.446	Peromyscus_maniculatus_bairdii
ENSPMEG00000021871	rrp12	83	56.138	ENSPMAG00000007493	rrp12	82	56.033	Petromyzon_marinus
ENSPMEG00000021871	rrp12	99	63.826	ENSPCIG00000002157	RRP12	99	63.913	Phascolarctos_cinereus
ENSPMEG00000021871	rrp12	100	99.845	ENSPFOG00000014975	rrp12	100	99.845	Poecilia_formosa
ENSPMEG00000021871	rrp12	100	99.457	ENSPLAG00000009840	rrp12	100	99.457	Poecilia_latipinna
ENSPMEG00000021871	rrp12	100	96.216	ENSPREG00000020950	rrp12	100	96.216	Poecilia_reticulata
ENSPMEG00000021871	rrp12	99	62.846	ENSPPYG00000002528	RRP12	99	63.129	Pongo_abelii
ENSPMEG00000021871	rrp12	94	77.966	ENSPCAG00000008967	RRP12	94	77.966	Procavia_capensis
ENSPMEG00000021871	rrp12	99	76.974	ENSPCOG00000014009	RRP12	99	63.997	Propithecus_coquereli
ENSPMEG00000021871	rrp12	99	60.739	ENSPVAG00000003370	RRP12	99	60.930	Pteropus_vampyrus
ENSPMEG00000021871	rrp12	99	86.261	ENSPNYG00000009451	rrp12	99	86.261	Pundamilia_nyererei
ENSPMEG00000021871	rrp12	94	85.455	ENSPNAG00000007658	rrp12	99	75.938	Pygocentrus_nattereri
ENSPMEG00000021871	rrp12	99	63.223	ENSRNOG00000048495	Rrp12	99	63.587	Rattus_norvegicus
ENSPMEG00000021871	rrp12	92	76.316	ENSRBIG00000021296	RRP12	99	64.031	Rhinopithecus_bieti
ENSPMEG00000021871	rrp12	92	76.316	ENSRROG00000032482	RRP12	99	63.953	Rhinopithecus_roxellana
ENSPMEG00000021871	rrp12	92	75.000	ENSSBOG00000030992	RRP12	99	63.658	Saimiri_boliviensis_boliviensis
ENSPMEG00000021871	rrp12	99	64.164	ENSSHAG00000018275	RRP12	99	64.436	Sarcophilus_harrisii
ENSPMEG00000021871	rrp12	99	75.485	ENSSFOG00015016400	rrp12	99	75.800	Scleropages_formosus
ENSPMEG00000021871	rrp12	99	85.000	ENSSMAG00000004047	rrp12	99	85.402	Scophthalmus_maximus
ENSPMEG00000021871	rrp12	99	87.354	ENSSDUG00000022871	rrp12	99	87.354	Seriola_dumerili
ENSPMEG00000021871	rrp12	99	87.198	ENSSLDG00000003038	rrp12	99	87.198	Seriola_lalandi_dorsalis
ENSPMEG00000021871	rrp12	100	61.615	ENSSPUG00000012221	RRP12	99	61.783	Sphenodon_punctatus
ENSPMEG00000021871	rrp12	99	87.900	ENSSPAG00000002261	rrp12	99	88.212	Stegastes_partitus
ENSPMEG00000021871	rrp12	100	62.741	ENSSSCG00000010514	RRP12	99	62.995	Sus_scrofa
ENSPMEG00000021871	rrp12	89	60.297	ENSTGUG00000009711	RRP12	99	60.510	Taeniopygia_guttata
ENSPMEG00000021871	rrp12	100	78.527	ENSTRUG00000012017	rrp12	99	78.532	Takifugu_rubripes
ENSPMEG00000021871	rrp12	100	83.346	ENSTNIG00000016522	rrp12	99	83.450	Tetraodon_nigroviridis
ENSPMEG00000021871	rrp12	77	73.529	ENSTBEG00000004907	RRP12	79	73.529	Tupaia_belangeri
ENSPMEG00000021871	rrp12	100	61.355	ENSTTRG00000009878	RRP12	99	61.753	Tursiops_truncatus
ENSPMEG00000021871	rrp12	99	63.853	ENSUAMG00000009092	RRP12	99	64.247	Ursus_americanus
ENSPMEG00000021871	rrp12	99	62.085	ENSUMAG00000021621	RRP12	99	62.626	Ursus_maritimus
ENSPMEG00000021871	rrp12	99	63.650	ENSVVUG00000023168	RRP12	99	63.594	Vulpes_vulpes
ENSPMEG00000021871	rrp12	99	65.271	ENSXETG00000003430	rrp12	99	65.445	Xenopus_tropicalis
ENSPMEG00000021871	rrp12	90	95.185	ENSXCOG00000012082	rrp12	97	95.193	Xiphophorus_couchianus
ENSPMEG00000021871	rrp12	100	96.512	ENSXMAG00000013498	rrp12	100	96.512	Xiphophorus_maculatus