EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMEG00000022232 (Gene tree)
Gene ID: 106903384
Gene Symbol: -
Alias: -
Full Name: TWIST neighbor
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Minus strand
Length: 4309 bases
Position: chrKQ552770.1:53238-57546
Accession: 106903384
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000019240	SHS2_Rpb7-N	PF03876.17	1.4e-09	1	1
ENSPMEP00000033614	SHS2_Rpb7-N	PF03876.17	1.4e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000028589	-	2506	XM_014967130	ENSPMEP00000019240	376 (aa)	XP_014822616	UPI00072E0C22
ENSPMET00000028660	-	2425	-	ENSPMEP00000033614	376 (aa)	-	UPI00072E0C22

Gene Model

Click here to download ENSPMEG00000022232's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000022232's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000022232	-	96	54.377	ENSCSEG00000008986	-	94	53.639	Cynoglossus_semilaevis
ENSPMEG00000022232	-	96	64.481	ENSMAMG00000010095	-	94	60.847	Mastacembelus_armatus
ENSPMEG00000022232	-	95	59.318	ENSONIG00000010857	-	96	60.811	Oreochromis_niloticus
ENSPMEG00000022232	-	100	60.925	ENSOMEG00000015768	-	99	61.026	Oryzias_melastigma
ENSPMEG00000022232	-	100	99.202	ENSPFOG00000001131	-	100	99.202	Poecilia_formosa
ENSPMEG00000022232	-	100	98.404	ENSPLAG00000019986	-	100	98.404	Poecilia_latipinna
ENSPMEG00000022232	-	100	93.651	ENSPREG00000003434	-	100	93.386	Poecilia_reticulata
ENSPMEG00000022232	-	97	63.780	ENSSLDG00000013316	-	94	65.867	Seriola_lalandi_dorsalis
ENSPMEG00000022232	-	99	56.397	ENSTRUG00000019854	-	64	70.492	Takifugu_rubripes
ENSPMEG00000022232	-	97	86.301	ENSXMAG00000023876	-	97	91.233	Xiphophorus_maculatus