EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMEG00000022515 (Gene tree)
Gene ID: 106927812
Gene Symbol: r3hcc1
Alias: -
Full Name: R3H domain and coiled-coil containing 1
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Minus strand
Length: 9642 bases
Position: chrKQ551958.1:106399-116040
Accession: 106927812
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000019523	R3H	PF01424.22	1.5e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000034651	-	6495	XM_015003628	ENSPMEP00000019523	449 (aa)	XP_014859114	UPI000514C416

Gene Model

Click here to download ENSPMEG00000022515's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000022515's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000022515	r3hcc1	90	33.257	ENSG00000104679	R3HCC1	100	41.860	Homo_sapiens
ENSPMEG00000022515	r3hcc1	91	56.068	ENSAPOG00000003616	r3hcc1	93	56.280	Acanthochromis_polyacanthus
ENSPMEG00000022515	r3hcc1	91	34.529	ENSAMEG00000002963	R3HCC1	89	34.375	Ailuropoda_melanoleuca
ENSPMEG00000022515	r3hcc1	92	53.556	ENSACIG00000017144	r3hcc1	98	62.112	Amphilophus_citrinellus
ENSPMEG00000022515	r3hcc1	90	57.073	ENSAOCG00000003945	r3hcc1	100	57.282	Amphiprion_ocellaris
ENSPMEG00000022515	r3hcc1	90	57.524	ENSAPEG00000003613	r3hcc1	100	57.524	Amphiprion_percula
ENSPMEG00000022515	r3hcc1	85	60.614	ENSATEG00000023860	r3hcc1	100	60.934	Anabas_testudineus
ENSPMEG00000022515	r3hcc1	91	35.068	ENSACAG00000016627	R3HCC1	96	35.909	Anolis_carolinensis
ENSPMEG00000022515	r3hcc1	90	33.333	ENSANAG00000036169	R3HCC1	96	33.333	Aotus_nancymaae
ENSPMEG00000022515	r3hcc1	90	34.932	ENSBTAG00000025830	R3HCC1	93	34.852	Bos_taurus
ENSPMEG00000022515	r3hcc1	90	33.415	ENSCJAG00000020118	R3HCC1	96	33.575	Callithrix_jacchus
ENSPMEG00000022515	r3hcc1	90	34.554	ENSCAFG00000009210	R3HCC1	92	35.349	Canis_familiaris
ENSPMEG00000022515	r3hcc1	78	32.982	ENSCAFG00020012870	R3HCC1	85	33.245	Canis_lupus_dingo
ENSPMEG00000022515	r3hcc1	90	34.793	ENSCHIG00000009107	R3HCC1	96	35.172	Capra_hircus
ENSPMEG00000022515	r3hcc1	90	34.562	ENSTSYG00000000511	R3HCC1	75	35.185	Carlito_syrichta
ENSPMEG00000022515	r3hcc1	54	41.121	ENSCAPG00000015813	R3HCC1	56	41.121	Cavia_aperea
ENSPMEG00000022515	r3hcc1	68	41.718	ENSCPOG00000009696	R3HCC1	65	41.718	Cavia_porcellus
ENSPMEG00000022515	r3hcc1	90	33.487	ENSCCAG00000037811	R3HCC1	96	33.659	Cebus_capucinus
ENSPMEG00000022515	r3hcc1	90	33.333	ENSCATG00000032971	R3HCC1	96	34.699	Cercocebus_atys
ENSPMEG00000022515	r3hcc1	90	36.659	ENSCLAG00000015556	R3HCC1	81	36.902	Chinchilla_lanigera
ENSPMEG00000022515	r3hcc1	90	33.333	ENSCSAG00000016250	R3HCC1	89	34.873	Chlorocebus_sabaeus
ENSPMEG00000022515	r3hcc1	90	32.265	ENSCHOG00000000396	R3HCC1	93	35.023	Choloepus_hoffmanni
ENSPMEG00000022515	r3hcc1	90	34.562	ENSCANG00000029441	R3HCC1	96	34.458	Colobus_angolensis_palliatus
ENSPMEG00000022515	r3hcc1	66	44.231	ENSCGRG00001014977	R3hcc1	96	32.692	Cricetulus_griseus_chok1gshd
ENSPMEG00000022515	r3hcc1	66	44.231	ENSCGRG00000004454	R3hcc1	96	32.692	Cricetulus_griseus_crigri
ENSPMEG00000022515	r3hcc1	90	56.132	ENSCSEG00000005748	r3hcc1	99	56.132	Cynoglossus_semilaevis
ENSPMEG00000022515	r3hcc1	78	64.225	ENSCVAG00000002640	r3hcc1	96	64.225	Cyprinodon_variegatus
ENSPMEG00000022515	r3hcc1	91	41.805	ENSDARG00000099593	r3hcc1	98	41.805	Danio_rerio
ENSPMEG00000022515	r3hcc1	93	33.259	ENSDNOG00000007168	R3HCC1	91	34.375	Dasypus_novemcinctus
ENSPMEG00000022515	r3hcc1	90	32.627	ENSDORG00000026365	R3hcc1	97	33.693	Dipodomys_ordii
ENSPMEG00000022515	r3hcc1	90	30.159	ENSETEG00000001147	R3HCC1	94	31.034	Echinops_telfairi
ENSPMEG00000022515	r3hcc1	65	45.033	ENSEASG00005018782	R3HCC1	78	35.484	Equus_asinus_asinus
ENSPMEG00000022515	r3hcc1	90	36.427	ENSECAG00000025013	R3HCC1	94	36.427	Equus_caballus
ENSPMEG00000022515	r3hcc1	90	35.632	ENSEEUG00000011918	R3HCC1	93	35.698	Erinaceus_europaeus
ENSPMEG00000022515	r3hcc1	87	47.242	ENSELUG00000023650	r3hcc1	99	47.816	Esox_lucius
ENSPMEG00000022515	r3hcc1	90	36.124	ENSFCAG00000012395	R3HCC1	93	36.744	Felis_catus
ENSPMEG00000022515	r3hcc1	70	35.882	ENSFALG00000001646	R3HCC1	55	36.000	Ficedula_albicollis
ENSPMEG00000022515	r3hcc1	89	36.500	ENSGMOG00000017590	-	98	36.500	Gadus_morhua
ENSPMEG00000022515	r3hcc1	99	91.537	ENSGAFG00000008747	-	99	91.537	Gambusia_affinis
ENSPMEG00000022515	r3hcc1	91	56.490	ENSGACG00000008447	r3hcc1	96	56.490	Gasterosteus_aculeatus
ENSPMEG00000022515	r3hcc1	74	45.238	ENSGAGG00000018009	R3HCC1	52	45.238	Gopherus_agassizii
ENSPMEG00000022515	r3hcc1	90	33.090	ENSGGOG00000013817	R3HCC1	96	34.307	Gorilla_gorilla
ENSPMEG00000022515	r3hcc1	67	84.337	ENSHBUG00000022250	-	88	84.337	Haplochromis_burtoni
ENSPMEG00000022515	r3hcc1	91	33.790	ENSHGLG00000010517	R3HCC1	90	35.321	Heterocephalus_glaber_female
ENSPMEG00000022515	r3hcc1	91	33.790	ENSHGLG00100006388	R3HCC1	90	35.321	Heterocephalus_glaber_male
ENSPMEG00000022515	r3hcc1	92	52.871	ENSHCOG00000011745	r3hcc1	95	53.555	Hippocampus_comes
ENSPMEG00000022515	r3hcc1	92	47.143	ENSIPUG00000024504	r3hcc1	87	47.619	Ictalurus_punctatus
ENSPMEG00000022515	r3hcc1	65	45.270	ENSSTOG00000027130	R3HCC1	67	45.270	Ictidomys_tridecemlineatus
ENSPMEG00000022515	r3hcc1	66	43.590	ENSJJAG00000013075	R3hcc1	97	33.626	Jaculus_jaculus
ENSPMEG00000022515	r3hcc1	87	66.583	ENSKMAG00000000286	r3hcc1	100	66.089	Kryptolebias_marmoratus
ENSPMEG00000022515	r3hcc1	71	45.752	ENSLACG00000011894	R3HCC1	73	45.752	Latimeria_chalumnae
ENSPMEG00000022515	r3hcc1	96	41.943	ENSLOCG00000015442	r3hcc1	98	43.216	Lepisosteus_oculatus
ENSPMEG00000022515	r3hcc1	64	46.099	ENSLAFG00000016137	R3HCC1	58	46.099	Loxodonta_africana
ENSPMEG00000022515	r3hcc1	90	34.074	ENSMFAG00000032894	R3HCC1	96	34.300	Macaca_fascicularis
ENSPMEG00000022515	r3hcc1	90	33.659	ENSMMUG00000016655	R3HCC1	96	34.300	Macaca_mulatta
ENSPMEG00000022515	r3hcc1	90	35.062	ENSMNEG00000043283	R3HCC1	96	34.541	Macaca_nemestrina
ENSPMEG00000022515	r3hcc1	90	35.036	ENSMLEG00000030147	R3HCC1	96	35.663	Mandrillus_leucophaeus
ENSPMEG00000022515	r3hcc1	87	58.168	ENSMAMG00000018146	r3hcc1	100	59.901	Mastacembelus_armatus
ENSPMEG00000022515	r3hcc1	90	34.694	ENSMGAG00000001356	R3HCC1	89	34.694	Meleagris_gallopavo
ENSPMEG00000022515	r3hcc1	63	46.429	ENSMAUG00000016096	R3hcc1	96	33.043	Mesocricetus_auratus
ENSPMEG00000022515	r3hcc1	90	35.349	ENSMICG00000011146	R3HCC1	96	34.940	Microcebus_murinus
ENSPMEG00000022515	r3hcc1	64	44.828	ENSMOCG00000018508	R3hcc1	96	33.333	Microtus_ochrogaster
ENSPMEG00000022515	r3hcc1	87	55.932	ENSMALG00000000731	r3hcc1	100	58.128	Monopterus_albus
ENSPMEG00000022515	r3hcc1	64	42.069	MGP_CAROLIEiJ_G0019467	R3hcc1	66	40.940	Mus_caroli
ENSPMEG00000022515	r3hcc1	65	41.892	ENSMUSG00000034194	R3hcc1	97	31.513	Mus_musculus
ENSPMEG00000022515	r3hcc1	65	41.892	MGP_PahariEiJ_G0030484	R3hcc1	70	41.892	Mus_pahari
ENSPMEG00000022515	r3hcc1	65	41.892	MGP_SPRETEiJ_G0020359	R3hcc1	97	31.866	Mus_spretus
ENSPMEG00000022515	r3hcc1	90	33.333	ENSMPUG00000003457	R3HCC1	84	34.475	Mustela_putorius_furo
ENSPMEG00000022515	r3hcc1	91	33.408	ENSMLUG00000000266	R3HCC1	89	35.335	Myotis_lucifugus
ENSPMEG00000022515	r3hcc1	63	45.390	ENSNGAG00000016747	R3hcc1	96	34.361	Nannospalax_galili
ENSPMEG00000022515	r3hcc1	77	85.714	ENSNBRG00000016975	-	82	85.714	Neolamprologus_brichardi
ENSPMEG00000022515	r3hcc1	91	31.336	ENSNLEG00000015944	R3HCC1	91	31.336	Nomascus_leucogenys
ENSPMEG00000022515	r3hcc1	94	34.889	ENSMEUG00000010587	R3HCC1	99	34.889	Notamacropus_eugenii
ENSPMEG00000022515	r3hcc1	65	47.059	ENSOPRG00000013390	R3HCC1	92	35.104	Ochotona_princeps
ENSPMEG00000022515	r3hcc1	90	34.565	ENSODEG00000007529	R3HCC1	97	34.565	Octodon_degus
ENSPMEG00000022515	r3hcc1	90	33.721	ENSOANG00000013877	R3HCC1	94	35.349	Ornithorhynchus_anatinus
ENSPMEG00000022515	r3hcc1	87	52.405	ENSORLG00000016816	r3hcc1	100	52.405	Oryzias_latipes
ENSPMEG00000022515	r3hcc1	87	51.899	ENSORLG00020012005	r3hcc1	100	51.899	Oryzias_latipes_hni
ENSPMEG00000022515	r3hcc1	87	52.911	ENSORLG00015007018	r3hcc1	100	52.911	Oryzias_latipes_hsok
ENSPMEG00000022515	r3hcc1	87	54.430	ENSOMEG00000000816	r3hcc1	100	54.430	Oryzias_melastigma
ENSPMEG00000022515	r3hcc1	91	33.333	ENSOGAG00000001291	R3HCC1	90	34.459	Otolemur_garnettii
ENSPMEG00000022515	r3hcc1	90	34.694	ENSOARG00000010146	R3HCC1	94	34.259	Ovis_aries
ENSPMEG00000022515	r3hcc1	90	32.569	ENSPPAG00000033165	R3HCC1	96	33.575	Pan_paniscus
ENSPMEG00000022515	r3hcc1	90	35.945	ENSPPRG00000002522	R3HCC1	97	37.037	Panthera_pardus
ENSPMEG00000022515	r3hcc1	83	35.930	ENSPTIG00000011230	R3HCC1	93	37.121	Panthera_tigris_altaica
ENSPMEG00000022515	r3hcc1	90	32.569	ENSPTRG00000020076	R3HCC1	96	33.333	Pan_troglodytes
ENSPMEG00000022515	r3hcc1	90	33.902	ENSPANG00000000453	R3HCC1	96	34.634	Papio_anubis
ENSPMEG00000022515	r3hcc1	83	45.767	ENSPKIG00000020397	-	95	45.767	Paramormyrops_kingsleyae
ENSPMEG00000022515	r3hcc1	83	46.524	ENSPKIG00000014426	-	94	46.524	Paramormyrops_kingsleyae
ENSPMEG00000022515	r3hcc1	90	35.484	ENSPSIG00000017664	R3HCC1	96	36.406	Pelodiscus_sinensis
ENSPMEG00000022515	r3hcc1	62	58.741	ENSPMGG00000007792	r3hcc1	98	38.652	Periophthalmus_magnuspinnatus
ENSPMEG00000022515	r3hcc1	69	42.953	ENSPEMG00000007118	R3hcc1	96	32.473	Peromyscus_maniculatus_bairdii
ENSPMEG00000022515	r3hcc1	82	32.750	ENSPCIG00000022718	-	81	32.750	Phascolarctos_cinereus
ENSPMEG00000022515	r3hcc1	100	100.000	ENSPFOG00000022301	r3hcc1	100	100.000	Poecilia_formosa
ENSPMEG00000022515	r3hcc1	100	98.441	ENSPLAG00000010794	r3hcc1	100	98.441	Poecilia_latipinna
ENSPMEG00000022515	r3hcc1	99	94.432	ENSPREG00000000713	r3hcc1	99	94.432	Poecilia_reticulata
ENSPMEG00000022515	r3hcc1	83	33.166	ENSPPYG00000018436	R3HCC1	96	33.333	Pongo_abelii
ENSPMEG00000022515	r3hcc1	63	45.714	ENSPCAG00000012229	R3HCC1	63	45.714	Procavia_capensis
ENSPMEG00000022515	r3hcc1	90	34.033	ENSPCOG00000027554	R3HCC1	96	33.562	Propithecus_coquereli
ENSPMEG00000022515	r3hcc1	90	34.266	ENSPVAG00000009829	R3HCC1	93	34.266	Pteropus_vampyrus
ENSPMEG00000022515	r3hcc1	88	47.089	ENSPNAG00000023875	r3hcc1	99	48.241	Pygocentrus_nattereri
ENSPMEG00000022515	r3hcc1	73	41.818	ENSRNOG00000016777	AABR07018321.1	79	31.078	Rattus_norvegicus
ENSPMEG00000022515	r3hcc1	90	34.259	ENSRBIG00000028045	R3HCC1	96	34.300	Rhinopithecus_bieti
ENSPMEG00000022515	r3hcc1	90	34.411	ENSRROG00000031126	R3HCC1	96	34.300	Rhinopithecus_roxellana
ENSPMEG00000022515	r3hcc1	90	32.719	ENSSBOG00000022590	R3HCC1	96	33.256	Saimiri_boliviensis_boliviensis
ENSPMEG00000022515	r3hcc1	51	50.575	ENSSHAG00000016526	-	52	51.190	Sarcophilus_harrisii
ENSPMEG00000022515	r3hcc1	86	44.444	ENSSFOG00015013507	r3hcc1	100	44.949	Scleropages_formosus
ENSPMEG00000022515	r3hcc1	87	61.235	ENSSMAG00000008647	r3hcc1	100	61.235	Scophthalmus_maximus
ENSPMEG00000022515	r3hcc1	92	64.953	ENSSDUG00000022786	r3hcc1	99	66.121	Seriola_dumerili
ENSPMEG00000022515	r3hcc1	92	64.720	ENSSLDG00000019031	r3hcc1	99	65.888	Seriola_lalandi_dorsalis
ENSPMEG00000022515	r3hcc1	90	59.036	ENSSPAG00000013497	r3hcc1	100	59.036	Stegastes_partitus
ENSPMEG00000022515	r3hcc1	90	31.944	ENSSSCG00000037347	-	92	30.556	Sus_scrofa
ENSPMEG00000022515	r3hcc1	90	33.864	ENSSSCG00000039915	-	90	34.633	Sus_scrofa
ENSPMEG00000022515	r3hcc1	90	50.123	ENSTRUG00000015880	r3hcc1	99	50.123	Takifugu_rubripes
ENSPMEG00000022515	r3hcc1	91	32.816	ENSTTRG00000012247	R3HCC1	95	33.485	Tursiops_truncatus
ENSPMEG00000022515	r3hcc1	90	34.240	ENSUAMG00000007344	R3HCC1	96	34.943	Ursus_americanus
ENSPMEG00000022515	r3hcc1	95	34.047	ENSVVUG00000005056	R3HCC1	92	34.318	Vulpes_vulpes
ENSPMEG00000022515	r3hcc1	84	87.071	ENSXCOG00000017626	r3hcc1	86	87.071	Xiphophorus_couchianus
ENSPMEG00000022515	r3hcc1	99	92.428	ENSXMAG00000018375	r3hcc1	99	92.428	Xiphophorus_maculatus