EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMEG00000022876 (Gene tree)
Gene ID: 106914994
Gene Symbol: tsen54
Alias: -
Full Name: tRNA splicing endonuclease subunit 54
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Minus strand
Length: 8568 bases
Position: chrKQ550984.1:1452553-1461120
Accession: 106914994
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000034007	tRNA_int_end_N2	PF12928.7	2.1e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000029331	-	2794	XM_014982321	ENSPMEP00000034007	496 (aa)	XP_014837807	UPI00072E5DD0

Gene Model

Click here to download ENSPMEG00000022876's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000022876's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000022876	tsen54	99	47.170	ENSG00000182173	TSEN54	100	65.278	Homo_sapiens
ENSPMEG00000022876	tsen54	100	72.299	ENSAPOG00000009659	tsen54	100	70.488	Acanthochromis_polyacanthus
ENSPMEG00000022876	tsen54	95	47.070	ENSAMEG00000009414	TSEN54	96	47.368	Ailuropoda_melanoleuca
ENSPMEG00000022876	tsen54	100	71.709	ENSAOCG00000000152	tsen54	98	71.709	Amphiprion_ocellaris
ENSPMEG00000022876	tsen54	100	71.709	ENSAPEG00000018931	tsen54	98	71.709	Amphiprion_percula
ENSPMEG00000022876	tsen54	100	67.358	ENSATEG00000019860	tsen54	100	68.302	Anabas_testudineus
ENSPMEG00000022876	tsen54	85	47.033	ENSAPLG00000009419	TSEN54	99	46.813	Anas_platyrhynchos
ENSPMEG00000022876	tsen54	99	47.519	ENSACAG00000006714	TSEN54	99	47.710	Anolis_carolinensis
ENSPMEG00000022876	tsen54	96	48.155	ENSANAG00000024061	TSEN54	98	46.768	Aotus_nancymaae
ENSPMEG00000022876	tsen54	100	69.098	ENSACLG00000019800	tsen54	100	69.098	Astatotilapia_calliptera
ENSPMEG00000022876	tsen54	97	58.182	ENSAMXG00000006546	tsen54	97	58.182	Astyanax_mexicanus
ENSPMEG00000022876	tsen54	96	47.665	ENSBTAG00000000824	TSEN54	97	47.767	Bos_taurus
ENSPMEG00000022876	tsen54	96	47.195	ENSCJAG00000014278	TSEN54	98	47.818	Callithrix_jacchus
ENSPMEG00000022876	tsen54	99	46.529	ENSCAFG00000004798	TSEN54	99	46.881	Canis_familiaris
ENSPMEG00000022876	tsen54	99	46.529	ENSCAFG00020000312	TSEN54	99	46.881	Canis_lupus_dingo
ENSPMEG00000022876	tsen54	96	47.647	ENSCHIG00000019908	TSEN54	97	47.647	Capra_hircus
ENSPMEG00000022876	tsen54	85	45.852	ENSTSYG00000037439	TSEN54	99	45.852	Carlito_syrichta
ENSPMEG00000022876	tsen54	96	46.990	ENSCCAG00000036624	TSEN54	98	47.280	Cebus_capucinus
ENSPMEG00000022876	tsen54	96	47.885	ENSCATG00000042877	TSEN54	98	47.547	Cercocebus_atys
ENSPMEG00000022876	tsen54	96	48.555	ENSCLAG00000002924	TSEN54	96	47.977	Chinchilla_lanigera
ENSPMEG00000022876	tsen54	99	46.792	ENSCSAG00000004809	TSEN54	99	46.893	Chlorocebus_sabaeus
ENSPMEG00000022876	tsen54	97	48.263	ENSCPBG00000028071	TSEN54	98	47.683	Chrysemys_picta_bellii
ENSPMEG00000022876	tsen54	99	46.828	ENSCANG00000028053	TSEN54	99	46.568	Colobus_angolensis_palliatus
ENSPMEG00000022876	tsen54	99	45.009	ENSCGRG00001020029	Tsen54	99	44.906	Cricetulus_griseus_chok1gshd
ENSPMEG00000022876	tsen54	83	44.295	ENSCGRG00000016289	Tsen54	99	43.848	Cricetulus_griseus_crigri
ENSPMEG00000022876	tsen54	80	55.556	ENSCSEG00000020586	tsen54	99	55.556	Cynoglossus_semilaevis
ENSPMEG00000022876	tsen54	80	57.320	ENSDARG00000036844	tsen54	100	57.921	Danio_rerio
ENSPMEG00000022876	tsen54	99	45.779	ENSDNOG00000018452	TSEN54	99	46.182	Dasypus_novemcinctus
ENSPMEG00000022876	tsen54	96	47.451	ENSDORG00000004073	Tsen54	99	46.792	Dipodomys_ordii
ENSPMEG00000022876	tsen54	95	32.692	ENSEBUG00000005203	TSEN54	94	32.692	Eptatretus_burgeri
ENSPMEG00000022876	tsen54	99	47.637	ENSEASG00005000579	TSEN54	99	47.259	Equus_asinus_asinus
ENSPMEG00000022876	tsen54	99	47.070	ENSECAG00000004924	TSEN54	99	46.692	Equus_caballus
ENSPMEG00000022876	tsen54	85	45.197	ENSEEUG00000008467	TSEN54	99	45.887	Erinaceus_europaeus
ENSPMEG00000022876	tsen54	99	57.721	ENSELUG00000017703	tsen54	92	57.904	Esox_lucius
ENSPMEG00000022876	tsen54	96	47.582	ENSFCAG00000023712	TSEN54	97	48.162	Felis_catus
ENSPMEG00000022876	tsen54	93	48.671	ENSFALG00000001119	TSEN54	92	48.057	Ficedula_albicollis
ENSPMEG00000022876	tsen54	85	47.598	ENSFDAG00000019090	TSEN54	99	47.598	Fukomys_damarensis
ENSPMEG00000022876	tsen54	100	81.818	ENSFHEG00000005470	tsen54	100	81.818	Fundulus_heteroclitus
ENSPMEG00000022876	tsen54	84	59.896	ENSGMOG00000013146	tsen54	99	59.896	Gadus_morhua
ENSPMEG00000022876	tsen54	96	43.725	ENSGALG00000047163	TSEN54	99	43.529	Gallus_gallus
ENSPMEG00000022876	tsen54	100	92.540	ENSGAFG00000005111	tsen54	100	92.540	Gambusia_affinis
ENSPMEG00000022876	tsen54	96	65.306	ENSGACG00000014987	tsen54	100	65.102	Gasterosteus_aculeatus
ENSPMEG00000022876	tsen54	97	48.456	ENSGAGG00000006825	TSEN54	96	48.456	Gopherus_agassizii
ENSPMEG00000022876	tsen54	95	47.741	ENSGGOG00000009417	TSEN54	99	47.647	Gorilla_gorilla
ENSPMEG00000022876	tsen54	90	68.153	ENSHBUG00000018296	tsen54	92	68.153	Haplochromis_burtoni
ENSPMEG00000022876	tsen54	99	47.290	ENSHGLG00000007979	TSEN54	99	46.916	Heterocephalus_glaber_female
ENSPMEG00000022876	tsen54	99	46.355	ENSHGLG00100005497	TSEN54	99	45.981	Heterocephalus_glaber_male
ENSPMEG00000022876	tsen54	80	65.931	ENSHCOG00000007481	tsen54	100	66.422	Hippocampus_comes
ENSPMEG00000022876	tsen54	98	52.071	ENSIPUG00000000590	tsen54	97	51.874	Ictalurus_punctatus
ENSPMEG00000022876	tsen54	98	46.476	ENSSTOG00000012883	TSEN54	98	46.476	Ictidomys_tridecemlineatus
ENSPMEG00000022876	tsen54	99	46.369	ENSJJAG00000007365	Tsen54	99	46.369	Jaculus_jaculus
ENSPMEG00000022876	tsen54	100	70.833	ENSKMAG00000006944	tsen54	100	70.644	Kryptolebias_marmoratus
ENSPMEG00000022876	tsen54	100	65.769	ENSLBEG00000004199	tsen54	100	65.769	Labrus_bergylta
ENSPMEG00000022876	tsen54	96	43.217	ENSLACG00000009497	TSEN54	99	43.217	Latimeria_chalumnae
ENSPMEG00000022876	tsen54	97	55.212	ENSLOCG00000011191	tsen54	97	55.019	Lepisosteus_oculatus
ENSPMEG00000022876	tsen54	92	47.131	ENSLAFG00000011655	TSEN54	92	47.131	Loxodonta_africana
ENSPMEG00000022876	tsen54	99	46.792	ENSMFAG00000000712	TSEN54	99	46.893	Macaca_fascicularis
ENSPMEG00000022876	tsen54	99	46.792	ENSMNEG00000029199	TSEN54	99	46.893	Macaca_nemestrina
ENSPMEG00000022876	tsen54	85	46.053	ENSMLEG00000044168	TSEN54	88	46.171	Mandrillus_leucophaeus
ENSPMEG00000022876	tsen54	100	70.588	ENSMAMG00000019773	tsen54	100	70.588	Mastacembelus_armatus
ENSPMEG00000022876	tsen54	100	68.906	ENSMZEG00005000884	tsen54	100	68.906	Maylandia_zebra
ENSPMEG00000022876	tsen54	92	43.232	ENSMGAG00000009556	TSEN54	92	44.153	Meleagris_gallopavo
ENSPMEG00000022876	tsen54	99	47.191	ENSMAUG00000016838	Tsen54	99	46.816	Mesocricetus_auratus
ENSPMEG00000022876	tsen54	99	47.868	ENSMICG00000044012	TSEN54	99	48.249	Microcebus_murinus
ENSPMEG00000022876	tsen54	99	47.529	ENSMOCG00000021585	Tsen54	99	46.958	Microtus_ochrogaster
ENSPMEG00000022876	tsen54	96	63.450	ENSMMOG00000020189	tsen54	99	64.476	Mola_mola
ENSPMEG00000022876	tsen54	96	45.402	ENSMODG00000007438	TSEN54	95	45.402	Monodelphis_domestica
ENSPMEG00000022876	tsen54	99	68.906	ENSMALG00000020573	tsen54	99	69.038	Monopterus_albus
ENSPMEG00000022876	tsen54	99	45.779	MGP_CAROLIEiJ_G0017417	Tsen54	99	45.403	Mus_caroli
ENSPMEG00000022876	tsen54	99	46.881	ENSMUSG00000020781	Tsen54	99	46.503	Mus_musculus
ENSPMEG00000022876	tsen54	99	46.667	MGP_PahariEiJ_G0018547	Tsen54	99	46.286	Mus_pahari
ENSPMEG00000022876	tsen54	99	46.881	MGP_SPRETEiJ_G0018262	Tsen54	99	46.503	Mus_spretus
ENSPMEG00000022876	tsen54	99	44.007	ENSMPUG00000013870	TSEN54	99	44.382	Mustela_putorius_furo
ENSPMEG00000022876	tsen54	96	47.284	ENSMLUG00000015298	TSEN54	96	47.082	Myotis_lucifugus
ENSPMEG00000022876	tsen54	96	48.509	ENSNGAG00000015673	Tsen54	97	47.913	Nannospalax_galili
ENSPMEG00000022876	tsen54	88	41.702	ENSMEUG00000011908	TSEN54	99	41.702	Notamacropus_eugenii
ENSPMEG00000022876	tsen54	96	45.129	ENSOPRG00000012513	TSEN54	96	44.930	Ochotona_princeps
ENSPMEG00000022876	tsen54	100	68.199	ENSONIG00000009543	tsen54	100	68.199	Oreochromis_niloticus
ENSPMEG00000022876	tsen54	99	43.774	ENSOCUG00000009875	TSEN54	99	43.762	Oryctolagus_cuniculus
ENSPMEG00000022876	tsen54	100	66.733	ENSORLG00000000852	tsen54	100	66.733	Oryzias_latipes
ENSPMEG00000022876	tsen54	100	67.134	ENSORLG00020018221	tsen54	100	67.134	Oryzias_latipes_hni
ENSPMEG00000022876	tsen54	98	67.689	ENSORLG00015009413	tsen54	99	67.689	Oryzias_latipes_hsok
ENSPMEG00000022876	tsen54	100	68.337	ENSOMEG00000014402	tsen54	97	68.337	Oryzias_melastigma
ENSPMEG00000022876	tsen54	96	46.484	ENSOGAG00000001442	TSEN54	97	46.094	Otolemur_garnettii
ENSPMEG00000022876	tsen54	85	44.737	ENSOARG00000010361	TSEN54	99	45.295	Ovis_aries
ENSPMEG00000022876	tsen54	94	47.305	ENSPPAG00000043519	TSEN54	99	48.221	Pan_paniscus
ENSPMEG00000022876	tsen54	96	47.776	ENSPPRG00000009162	TSEN54	97	48.356	Panthera_pardus
ENSPMEG00000022876	tsen54	85	45.898	ENSPTIG00000019312	TSEN54	96	45.898	Panthera_tigris_altaica
ENSPMEG00000022876	tsen54	99	46.981	ENSPTRG00000009646	TSEN54	99	46.893	Pan_troglodytes
ENSPMEG00000022876	tsen54	99	47.431	ENSPANG00000020133	TSEN54	99	47.092	Papio_anubis
ENSPMEG00000022876	tsen54	98	54.749	ENSPKIG00000023018	tsen54	99	54.785	Paramormyrops_kingsleyae
ENSPMEG00000022876	tsen54	80	43.936	ENSPSIG00000012807	TSEN54	100	43.707	Pelodiscus_sinensis
ENSPMEG00000022876	tsen54	93	49.788	ENSPMGG00000019578	tsen54	100	49.576	Periophthalmus_magnuspinnatus
ENSPMEG00000022876	tsen54	99	45.607	ENSPEMG00000014857	Tsen54	99	45.421	Peromyscus_maniculatus_bairdii
ENSPMEG00000022876	tsen54	100	97.400	ENSPFOG00000022740	tsen54	100	97.400	Poecilia_formosa
ENSPMEG00000022876	tsen54	100	99.395	ENSPLAG00000014847	tsen54	100	99.395	Poecilia_latipinna
ENSPMEG00000022876	tsen54	100	95.161	ENSPREG00000013090	tsen54	100	95.161	Poecilia_reticulata
ENSPMEG00000022876	tsen54	91	48.373	ENSPPYG00000008629	TSEN54	99	48.069	Pongo_abelii
ENSPMEG00000022876	tsen54	92	41.822	ENSPCAG00000002093	TSEN54	96	41.822	Procavia_capensis
ENSPMEG00000022876	tsen54	99	46.080	ENSPCOG00000027880	TSEN54	99	46.743	Propithecus_coquereli
ENSPMEG00000022876	tsen54	99	46.881	ENSPVAG00000008446	TSEN54	99	47.259	Pteropus_vampyrus
ENSPMEG00000022876	tsen54	93	68.219	ENSPNYG00000010217	tsen54	100	68.219	Pundamilia_nyererei
ENSPMEG00000022876	tsen54	97	57.004	ENSPNAG00000003770	tsen54	97	57.004	Pygocentrus_nattereri
ENSPMEG00000022876	tsen54	99	46.355	ENSRNOG00000004598	Tsen54	99	45.794	Rattus_norvegicus
ENSPMEG00000022876	tsen54	99	47.290	ENSRBIG00000043040	TSEN54	99	47.103	Rhinopithecus_bieti
ENSPMEG00000022876	tsen54	99	47.290	ENSRROG00000030797	TSEN54	99	47.103	Rhinopithecus_roxellana
ENSPMEG00000022876	tsen54	99	44.402	ENSSBOG00000013543	TSEN54	98	45.351	Saimiri_boliviensis_boliviensis
ENSPMEG00000022876	tsen54	96	46.110	ENSSHAG00000018127	TSEN54	96	46.110	Sarcophilus_harrisii
ENSPMEG00000022876	tsen54	80	54.048	ENSSFOG00015004093	tsen54	99	53.810	Scleropages_formosus
ENSPMEG00000022876	tsen54	97	67.061	ENSSMAG00000012449	tsen54	98	67.850	Scophthalmus_maximus
ENSPMEG00000022876	tsen54	100	71.923	ENSSDUG00000021506	tsen54	100	71.923	Seriola_dumerili
ENSPMEG00000022876	tsen54	100	71.731	ENSSLDG00000016303	tsen54	100	71.731	Seriola_lalandi_dorsalis
ENSPMEG00000022876	tsen54	79	43.294	ENSSPUG00000008988	TSEN54	96	42.689	Sphenodon_punctatus
ENSPMEG00000022876	tsen54	80	66.502	ENSSPAG00000008047	tsen54	100	66.502	Stegastes_partitus
ENSPMEG00000022876	tsen54	93	72.766	ENSSPAG00000008098	-	99	72.766	Stegastes_partitus
ENSPMEG00000022876	tsen54	96	47.002	ENSSSCG00000036852	TSEN54	97	47.953	Sus_scrofa
ENSPMEG00000022876	tsen54	85	47.788	ENSTGUG00000008548	TSEN54	99	47.124	Taeniopygia_guttata
ENSPMEG00000022876	tsen54	100	67.928	ENSTRUG00000004230	tsen54	100	67.530	Takifugu_rubripes
ENSPMEG00000022876	tsen54	96	64.113	ENSTNIG00000011281	tsen54	98	65.923	Tetraodon_nigroviridis
ENSPMEG00000022876	tsen54	85	44.956	ENSTTRG00000015828	TSEN54	99	45.077	Tursiops_truncatus
ENSPMEG00000022876	tsen54	80	44.804	ENSUAMG00000010045	TSEN54	99	44.342	Ursus_americanus
ENSPMEG00000022876	tsen54	82	45.067	ENSUMAG00000008979	TSEN54	99	45.638	Ursus_maritimus
ENSPMEG00000022876	tsen54	95	48.047	ENSVVUG00000011411	TSEN54	97	47.638	Vulpes_vulpes
ENSPMEG00000022876	tsen54	97	46.400	ENSXETG00000012532	tsen54	100	62.500	Xenopus_tropicalis
ENSPMEG00000022876	tsen54	97	84.200	ENSXCOG00000018245	tsen54	100	88.642	Xiphophorus_couchianus
ENSPMEG00000022876	tsen54	100	94.960	ENSXMAG00000018818	tsen54	100	94.960	Xiphophorus_maculatus