EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMEG00000022954 (Gene tree)
Gene ID: 106903335
Gene Symbol: trmt13
Alias: -
Full Name: tRNA methyltransferase 13 homolog
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Minus strand
Length: 10279 bases
Position: chrKQ552765.1:41579-51857
Accession: 106903335
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000034049	TRM13	PF05206.14	3.5e-78	1	1
ENSPMEP00000034049	zf-U11-48K	PF05253.12	1.1e-09	1	1
ENSPMEP00000034049	zf-TRM13_CCCH	PF11722.8	3.4e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000034821	-	3908	XM_014967052	ENSPMEP00000034049	445 (aa)	XP_014822538	UPI00072E7649

Gene Model

Click here to download ENSPMEG00000022954's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000022954's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000022954	trmt13	99	47.660	ENSG00000122435	TRMT13	96	48.571	Homo_sapiens
ENSPMEG00000022954	trmt13	100	63.878	ENSAPOG00000015131	trmt13	99	64.286	Acanthochromis_polyacanthus
ENSPMEG00000022954	trmt13	99	47.863	ENSAMEG00000008917	TRMT13	95	47.863	Ailuropoda_melanoleuca
ENSPMEG00000022954	trmt13	99	65.727	ENSACIG00000005804	trmt13	96	64.363	Amphilophus_citrinellus
ENSPMEG00000022954	trmt13	100	64.417	ENSAOCG00000023585	trmt13	99	64.417	Amphiprion_ocellaris
ENSPMEG00000022954	trmt13	100	64.622	ENSAPEG00000004025	trmt13	99	64.622	Amphiprion_percula
ENSPMEG00000022954	trmt13	99	65.801	ENSATEG00000006597	trmt13	96	65.801	Anabas_testudineus
ENSPMEG00000022954	trmt13	90	49.417	ENSAPLG00000014924	TRMT13	98	49.417	Anas_platyrhynchos
ENSPMEG00000022954	trmt13	99	51.717	ENSACAG00000003498	TRMT13	97	51.717	Anolis_carolinensis
ENSPMEG00000022954	trmt13	99	47.992	ENSANAG00000019525	TRMT13	95	47.992	Aotus_nancymaae
ENSPMEG00000022954	trmt13	99	67.770	ENSACLG00000020018	trmt13	98	67.770	Astatotilapia_calliptera
ENSPMEG00000022954	trmt13	99	53.092	ENSAMXG00000017963	trmt13	98	53.548	Astyanax_mexicanus
ENSPMEG00000022954	trmt13	99	47.021	ENSBTAG00000015781	TRMT13	95	47.021	Bos_taurus
ENSPMEG00000022954	trmt13	99	47.771	ENSCJAG00000000200	TRMT13	89	58.156	Callithrix_jacchus
ENSPMEG00000022954	trmt13	64	45.079	ENSCAFG00000020021	TRMT13	96	45.079	Canis_familiaris
ENSPMEG00000022954	trmt13	60	53.704	ENSCAFG00020011572	TRMT13	90	53.704	Canis_lupus_dingo
ENSPMEG00000022954	trmt13	99	47.034	ENSCHIG00000015395	TRMT13	96	47.034	Capra_hircus
ENSPMEG00000022954	trmt13	99	47.325	ENSTSYG00000010811	TRMT13	98	55.000	Carlito_syrichta
ENSPMEG00000022954	trmt13	53	76.471	ENSCAPG00000009085	TRMT13	96	38.719	Cavia_aperea
ENSPMEG00000022954	trmt13	99	48.203	ENSCPOG00000000694	TRMT13	96	48.203	Cavia_porcellus
ENSPMEG00000022954	trmt13	99	48.408	ENSCCAG00000023772	TRMT13	95	48.408	Cebus_capucinus
ENSPMEG00000022954	trmt13	99	48.077	ENSCATG00000033556	TRMT13	95	48.077	Cercocebus_atys
ENSPMEG00000022954	trmt13	89	47.733	ENSCLAG00000008220	TRMT13	97	47.733	Chinchilla_lanigera
ENSPMEG00000022954	trmt13	99	47.752	ENSCSAG00000001506	TRMT13	95	47.752	Chlorocebus_sabaeus
ENSPMEG00000022954	trmt13	99	50.213	ENSCPBG00000026671	TRMT13	96	50.213	Chrysemys_picta_bellii
ENSPMEG00000022954	trmt13	99	47.863	ENSCANG00000034659	TRMT13	95	47.863	Colobus_angolensis_palliatus
ENSPMEG00000022954	trmt13	99	47.436	ENSCGRG00001021601	Trmt13	95	47.436	Cricetulus_griseus_chok1gshd
ENSPMEG00000022954	trmt13	100	65.022	ENSCSEG00000000591	trmt13	98	65.022	Cynoglossus_semilaevis
ENSPMEG00000022954	trmt13	100	71.030	ENSCVAG00000017342	trmt13	94	71.030	Cyprinodon_variegatus
ENSPMEG00000022954	trmt13	99	52.928	ENSDARG00000102846	trmt13	96	52.928	Danio_rerio
ENSPMEG00000022954	trmt13	60	53.285	ENSDNOG00000001710	TRMT13	80	53.285	Dasypus_novemcinctus
ENSPMEG00000022954	trmt13	99	48.614	ENSDORG00000015808	Trmt13	95	48.614	Dipodomys_ordii
ENSPMEG00000022954	trmt13	99	34.641	FBgn0037435	CG18048	95	34.641	Drosophila_melanogaster
ENSPMEG00000022954	trmt13	99	41.226	ENSETEG00000005819	TRMT13	96	41.226	Echinops_telfairi
ENSPMEG00000022954	trmt13	98	44.565	ENSEBUG00000014444	trmt13	96	44.565	Eptatretus_burgeri
ENSPMEG00000022954	trmt13	99	47.761	ENSEASG00005015918	TRMT13	95	47.761	Equus_asinus_asinus
ENSPMEG00000022954	trmt13	99	47.761	ENSECAG00000022626	TRMT13	95	47.761	Equus_caballus
ENSPMEG00000022954	trmt13	79	56.364	ENSEEUG00000000294	TRMT13	73	56.364	Erinaceus_europaeus
ENSPMEG00000022954	trmt13	100	54.008	ENSELUG00000003803	trmt13	98	54.140	Esox_lucius
ENSPMEG00000022954	trmt13	99	47.335	ENSFCAG00000030618	TRMT13	98	48.252	Felis_catus
ENSPMEG00000022954	trmt13	99	51.515	ENSFALG00000002424	TRMT13	95	51.515	Ficedula_albicollis
ENSPMEG00000022954	trmt13	99	47.660	ENSFDAG00000006342	TRMT13	95	47.660	Fukomys_damarensis
ENSPMEG00000022954	trmt13	84	72.431	ENSFHEG00000022954	trmt13	99	72.464	Fundulus_heteroclitus
ENSPMEG00000022954	trmt13	98	52.009	ENSGMOG00000013223	trmt13	99	52.928	Gadus_morhua
ENSPMEG00000022954	trmt13	98	51.193	ENSGALG00000005290	TRMT13	96	51.183	Gallus_gallus
ENSPMEG00000022954	trmt13	84	93.316	ENSGAFG00000001577	trmt13	86	93.316	Gambusia_affinis
ENSPMEG00000022954	trmt13	99	66.667	ENSGACG00000013428	trmt13	98	66.667	Gasterosteus_aculeatus
ENSPMEG00000022954	trmt13	99	49.894	ENSGAGG00000023303	TRMT13	96	57.455	Gopherus_agassizii
ENSPMEG00000022954	trmt13	99	47.447	ENSGGOG00000005616	TRMT13	95	47.447	Gorilla_gorilla
ENSPMEG00000022954	trmt13	99	67.544	ENSHBUG00000007754	trmt13	98	67.544	Haplochromis_burtoni
ENSPMEG00000022954	trmt13	99	48.077	ENSHGLG00000002164	TRMT13	95	48.077	Heterocephalus_glaber_female
ENSPMEG00000022954	trmt13	99	48.077	ENSHGLG00100001618	TRMT13	95	48.077	Heterocephalus_glaber_male
ENSPMEG00000022954	trmt13	99	56.125	ENSHCOG00000020553	trmt13	98	55.142	Hippocampus_comes
ENSPMEG00000022954	trmt13	99	55.338	ENSIPUG00000024787	trmt13	98	55.773	Ictalurus_punctatus
ENSPMEG00000022954	trmt13	99	47.974	ENSSTOG00000013483	TRMT13	95	47.974	Ictidomys_tridecemlineatus
ENSPMEG00000022954	trmt13	99	47.872	ENSJJAG00000018012	Trmt13	96	47.872	Jaculus_jaculus
ENSPMEG00000022954	trmt13	65	65.217	ENSKMAG00000007639	trmt13	92	65.217	Kryptolebias_marmoratus
ENSPMEG00000022954	trmt13	100	64.731	ENSLBEG00000020238	trmt13	99	65.161	Labrus_bergylta
ENSPMEG00000022954	trmt13	99	50.321	ENSLACG00000013153	TRMT13	99	48.762	Latimeria_chalumnae
ENSPMEG00000022954	trmt13	99	51.957	ENSLOCG00000000418	trmt13	97	52.609	Lepisosteus_oculatus
ENSPMEG00000022954	trmt13	78	47.312	ENSLAFG00000002383	TRMT13	98	47.312	Loxodonta_africana
ENSPMEG00000022954	trmt13	99	48.077	ENSMFAG00000034681	TRMT13	95	48.077	Macaca_fascicularis
ENSPMEG00000022954	trmt13	99	48.077	ENSMMUG00000004243	TRMT13	95	48.077	Macaca_mulatta
ENSPMEG00000022954	trmt13	99	48.077	ENSMNEG00000036102	TRMT13	95	48.077	Macaca_nemestrina
ENSPMEG00000022954	trmt13	99	48.077	ENSMLEG00000034258	TRMT13	95	48.077	Mandrillus_leucophaeus
ENSPMEG00000022954	trmt13	99	65.502	ENSMAMG00000016597	trmt13	96	65.502	Mastacembelus_armatus
ENSPMEG00000022954	trmt13	99	67.550	ENSMZEG00005020959	trmt13	98	67.550	Maylandia_zebra
ENSPMEG00000022954	trmt13	90	51.059	ENSMGAG00000006970	TRMT13	98	51.059	Meleagris_gallopavo
ENSPMEG00000022954	trmt13	99	47.890	ENSMAUG00000010448	Trmt13	96	47.890	Mesocricetus_auratus
ENSPMEG00000022954	trmt13	99	48.401	ENSMICG00000005283	TRMT13	96	48.571	Microcebus_murinus
ENSPMEG00000022954	trmt13	99	47.458	ENSMOCG00000019914	Trmt13	96	47.458	Microtus_ochrogaster
ENSPMEG00000022954	trmt13	61	61.624	ENSMMOG00000007762	trmt13	90	61.624	Mola_mola
ENSPMEG00000022954	trmt13	99	47.579	ENSMODG00000003646	TRMT13	96	47.579	Monodelphis_domestica
ENSPMEG00000022954	trmt13	100	64.901	ENSMALG00000020965	trmt13	97	64.901	Monopterus_albus
ENSPMEG00000022954	trmt13	99	48.093	MGP_CAROLIEiJ_G0025568	Trmt13	96	49.180	Mus_caroli
ENSPMEG00000022954	trmt13	99	47.881	ENSMUSG00000033439	Trmt13	96	49.180	Mus_musculus
ENSPMEG00000022954	trmt13	99	48.298	MGP_PahariEiJ_G0027014	Trmt13	90	53.480	Mus_pahari
ENSPMEG00000022954	trmt13	99	48.101	MGP_SPRETEiJ_G0026518	Trmt13	96	49.180	Mus_spretus
ENSPMEG00000022954	trmt13	78	46.995	ENSMPUG00000002078	-	95	46.995	Mustela_putorius_furo
ENSPMEG00000022954	trmt13	99	48.827	ENSMLUG00000002124	TRMT13	95	48.827	Myotis_lucifugus
ENSPMEG00000022954	trmt13	99	62.061	ENSNBRG00000006783	trmt13	97	62.061	Neolamprologus_brichardi
ENSPMEG00000022954	trmt13	99	47.650	ENSNLEG00000035917	TRMT13	95	47.650	Nomascus_leucogenys
ENSPMEG00000022954	trmt13	55	47.561	ENSMEUG00000013346	-	95	47.561	Notamacropus_eugenii
ENSPMEG00000022954	trmt13	60	53.333	ENSOPRG00000012048	TRMT13	54	53.333	Ochotona_princeps
ENSPMEG00000022954	trmt13	99	67.763	ENSONIG00000004574	trmt13	98	67.763	Oreochromis_niloticus
ENSPMEG00000022954	trmt13	89	49.883	ENSOANG00000012057	TRMT13	96	49.883	Ornithorhynchus_anatinus
ENSPMEG00000022954	trmt13	99	47.122	ENSOCUG00000023095	TRMT13	96	47.122	Oryctolagus_cuniculus
ENSPMEG00000022954	trmt13	100	59.179	ENSORLG00000003320	trmt13	99	60.129	Oryzias_latipes
ENSPMEG00000022954	trmt13	99	61.319	ENSORLG00020005972	trmt13	97	61.319	Oryzias_latipes_hni
ENSPMEG00000022954	trmt13	100	66.231	ENSORLG00015002270	trmt13	99	66.231	Oryzias_latipes_hsok
ENSPMEG00000022954	trmt13	99	67.253	ENSOMEG00000006724	trmt13	94	67.253	Oryzias_melastigma
ENSPMEG00000022954	trmt13	99	47.569	ENSOGAG00000005618	TRMT13	93	47.771	Otolemur_garnettii
ENSPMEG00000022954	trmt13	99	47.034	ENSOARG00000017983	TRMT13	96	47.034	Ovis_aries
ENSPMEG00000022954	trmt13	99	47.863	ENSPPAG00000043736	TRMT13	95	47.863	Pan_paniscus
ENSPMEG00000022954	trmt13	99	47.335	ENSPPRG00000003424	TRMT13	98	48.252	Panthera_pardus
ENSPMEG00000022954	trmt13	99	47.335	ENSPTIG00000018598	TRMT13	98	48.252	Panthera_tigris_altaica
ENSPMEG00000022954	trmt13	99	47.558	ENSPTRG00000001001	TRMT13	96	47.558	Pan_troglodytes
ENSPMEG00000022954	trmt13	99	47.863	ENSPANG00000007598	TRMT13	95	47.863	Papio_anubis
ENSPMEG00000022954	trmt13	100	54.945	ENSPKIG00000001514	trmt13	98	54.945	Paramormyrops_kingsleyae
ENSPMEG00000022954	trmt13	89	49.647	ENSPSIG00000012703	TRMT13	99	49.647	Pelodiscus_sinensis
ENSPMEG00000022954	trmt13	100	56.987	ENSPMGG00000013298	trmt13	94	56.987	Periophthalmus_magnuspinnatus
ENSPMEG00000022954	trmt13	99	48.195	ENSPEMG00000000275	Trmt13	95	48.195	Peromyscus_maniculatus_bairdii
ENSPMEG00000022954	trmt13	99	48.109	ENSPMAG00000000823	trmt13	98	48.109	Petromyzon_marinus
ENSPMEG00000022954	trmt13	99	49.257	ENSPCIG00000007699	TRMT13	96	49.469	Phascolarctos_cinereus
ENSPMEG00000022954	trmt13	99	95.023	ENSPFOG00000008675	trmt13	95	95.023	Poecilia_formosa
ENSPMEG00000022954	trmt13	100	97.978	ENSPLAG00000009709	trmt13	100	97.978	Poecilia_latipinna
ENSPMEG00000022954	trmt13	84	95.213	ENSPREG00000005645	trmt13	95	86.364	Poecilia_reticulata
ENSPMEG00000022954	trmt13	98	48.276	ENSPPYG00000001120	TRMT13	94	48.276	Pongo_abelii
ENSPMEG00000022954	trmt13	99	47.009	ENSPCAG00000002340	TRMT13	95	47.009	Procavia_capensis
ENSPMEG00000022954	trmt13	99	48.614	ENSPCOG00000017984	TRMT13	95	48.614	Propithecus_coquereli
ENSPMEG00000022954	trmt13	99	47.335	ENSPVAG00000017430	TRMT13	95	47.335	Pteropus_vampyrus
ENSPMEG00000022954	trmt13	99	65.132	ENSPNYG00000013690	trmt13	98	65.132	Pundamilia_nyererei
ENSPMEG00000022954	trmt13	99	53.763	ENSPNAG00000022130	trmt13	98	53.763	Pygocentrus_nattereri
ENSPMEG00000022954	trmt13	99	48.408	ENSRNOG00000015140	Trmt13	93	48.408	Rattus_norvegicus
ENSPMEG00000022954	trmt13	99	47.863	ENSRBIG00000037686	TRMT13	95	47.863	Rhinopithecus_bieti
ENSPMEG00000022954	trmt13	99	47.863	ENSRROG00000044057	TRMT13	95	47.863	Rhinopithecus_roxellana
ENSPMEG00000022954	trmt13	99	48.408	ENSSBOG00000026541	TRMT13	95	48.408	Saimiri_boliviensis_boliviensis
ENSPMEG00000022954	trmt13	92	48.741	ENSSHAG00000005213	TRMT13	95	48.741	Sarcophilus_harrisii
ENSPMEG00000022954	trmt13	100	56.371	ENSSFOG00015017560	trmt13	98	56.371	Scleropages_formosus
ENSPMEG00000022954	trmt13	99	65.875	ENSSMAG00000014592	trmt13	96	65.875	Scophthalmus_maximus
ENSPMEG00000022954	trmt13	99	65.672	ENSSDUG00000015508	trmt13	96	65.678	Seriola_dumerili
ENSPMEG00000022954	trmt13	99	65.605	ENSSLDG00000019060	trmt13	96	65.605	Seriola_lalandi_dorsalis
ENSPMEG00000022954	trmt13	99	42.558	ENSSARG00000010344	TRMT13	98	42.558	Sorex_araneus
ENSPMEG00000022954	trmt13	98	49.892	ENSSPUG00000016339	TRMT13	98	49.892	Sphenodon_punctatus
ENSPMEG00000022954	trmt13	99	67.686	ENSSPAG00000011922	trmt13	99	67.532	Stegastes_partitus
ENSPMEG00000022954	trmt13	99	48.298	ENSSSCG00000006869	TRMT13	95	48.298	Sus_scrofa
ENSPMEG00000022954	trmt13	99	51.293	ENSTGUG00000005253	TRMT13	98	51.293	Taeniopygia_guttata
ENSPMEG00000022954	trmt13	99	63.111	ENSTRUG00000008400	trmt13	98	63.216	Takifugu_rubripes
ENSPMEG00000022954	trmt13	68	46.207	ENSTBEG00000008911	TRMT13	74	46.207	Tupaia_belangeri
ENSPMEG00000022954	trmt13	99	45.708	ENSUAMG00000017251	TRMT13	95	45.708	Ursus_americanus
ENSPMEG00000022954	trmt13	99	47.863	ENSUMAG00000007901	TRMT13	97	47.586	Ursus_maritimus
ENSPMEG00000022954	trmt13	78	62.264	ENSVPAG00000001034	TRMT13	84	62.264	Vicugna_pacos
ENSPMEG00000022954	trmt13	99	47.974	ENSVVUG00000021996	TRMT13	95	47.974	Vulpes_vulpes
ENSPMEG00000022954	trmt13	99	51.316	ENSXETG00000013204	trmt13	97	51.092	Xenopus_tropicalis
ENSPMEG00000022954	trmt13	100	93.933	ENSXMAG00000010765	trmt13	100	93.933	Xiphophorus_maculatus