EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMEG00000023176 (Gene tree)
Gene ID: 106909142
Gene Symbol: bms1
Alias: -
Full Name: BMS1%2C ribosome biogenesis factor
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Minus strand
Length: 28710 bases
Position: chrKQ553996.1:31054-59763
Accession: 106909142
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000020092	AARP2CN	PF08142.12	2.3e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000029650	-	4988	XM_014975452	ENSPMEP00000020092	1244 (aa)	XP_014830938	UPI00072E984A

Gene Model

Click here to download ENSPMEG00000023176's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000023176's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000023176	bms1	91	66.032	ENSG00000165733	BMS1	79	74.631	Homo_sapiens
ENSPMEG00000023176	bms1	82	78.982	ENSAPOG00000002296	bms1	99	79.359	Acanthochromis_polyacanthus
ENSPMEG00000023176	bms1	92	65.769	ENSAMEG00000016834	BMS1	79	74.510	Ailuropoda_melanoleuca
ENSPMEG00000023176	bms1	94	76.710	ENSACIG00000002588	bms1	99	77.319	Amphilophus_citrinellus
ENSPMEG00000023176	bms1	94	80.166	ENSAOCG00000018088	bms1	99	79.732	Amphiprion_ocellaris
ENSPMEG00000023176	bms1	94	80.066	ENSAPEG00000014673	bms1	99	79.540	Amphiprion_percula
ENSPMEG00000023176	bms1	94	78.706	ENSATEG00000023465	bms1	99	78.805	Anabas_testudineus
ENSPMEG00000023176	bms1	90	67.110	ENSAPLG00000003759	BMS1	84	70.745	Anas_platyrhynchos
ENSPMEG00000023176	bms1	94	65.524	ENSACAG00000004537	-	85	68.720	Anolis_carolinensis
ENSPMEG00000023176	bms1	91	66.186	ENSANAG00000023432	BMS1	79	74.631	Aotus_nancymaae
ENSPMEG00000023176	bms1	94	79.035	ENSACLG00000001294	bms1	99	78.453	Astatotilapia_calliptera
ENSPMEG00000023176	bms1	94	66.925	ENSBTAG00000012878	BMS1	79	75.369	Bos_taurus
ENSPMEG00000023176	bms1	81	54.271	WBGene00022021	Y61A9LA.10	91	56.593	Caenorhabditis_elegans
ENSPMEG00000023176	bms1	93	65.891	ENSCJAG00000021705	BMS1	85	67.314	Callithrix_jacchus
ENSPMEG00000023176	bms1	92	67.568	ENSCAFG00000007114	BMS1	79	74.631	Canis_familiaris
ENSPMEG00000023176	bms1	92	67.568	ENSCAFG00020025282	BMS1	79	74.631	Canis_lupus_dingo
ENSPMEG00000023176	bms1	93	67.118	ENSCHIG00000023251	BMS1	79	75.862	Capra_hircus
ENSPMEG00000023176	bms1	94	65.643	ENSCAPG00000008652	BMS1	85	66.667	Cavia_aperea
ENSPMEG00000023176	bms1	93	66.603	ENSCPOG00000000502	BMS1	85	67.708	Cavia_porcellus
ENSPMEG00000023176	bms1	94	56.037	ENSCCAG00000024969	-	75	57.536	Cebus_capucinus
ENSPMEG00000023176	bms1	77	55.556	ENSCATG00000008695	-	67	56.054	Cercocebus_atys
ENSPMEG00000023176	bms1	93	65.896	ENSCATG00000030625	-	79	73.892	Cercocebus_atys
ENSPMEG00000023176	bms1	90	67.636	ENSCLAG00000002446	BMS1	85	67.983	Chinchilla_lanigera
ENSPMEG00000023176	bms1	93	65.067	ENSCSAG00000011118	BMS1	79	74.138	Chlorocebus_sabaeus
ENSPMEG00000023176	bms1	94	64.559	ENSCHOG00000011055	BMS1	79	73.645	Choloepus_hoffmanni
ENSPMEG00000023176	bms1	93	67.510	ENSCPBG00000025581	BMS1	86	67.835	Chrysemys_picta_bellii
ENSPMEG00000023176	bms1	80	61.713	ENSCING00000003181	-	94	63.228	Ciona_intestinalis
ENSPMEG00000023176	bms1	67	70.040	ENSCSAVG00000004113	-	88	54.483	Ciona_savignyi
ENSPMEG00000023176	bms1	92	65.637	ENSCANG00000011609	BMS1	79	74.138	Colobus_angolensis_palliatus
ENSPMEG00000023176	bms1	93	61.313	ENSCGRG00001019461	Bms1	86	67.423	Cricetulus_griseus_chok1gshd
ENSPMEG00000023176	bms1	93	61.313	ENSCGRG00000009016	Bms1	85	67.423	Cricetulus_griseus_crigri
ENSPMEG00000023176	bms1	94	85.941	ENSCVAG00000008371	bms1	99	86.695	Cyprinodon_variegatus
ENSPMEG00000023176	bms1	50	74.295	ENSDARG00000054154	bms1	99	71.323	Danio_rerio
ENSPMEG00000023176	bms1	93	65.709	ENSDNOG00000015761	BMS1	79	74.877	Dasypus_novemcinctus
ENSPMEG00000023176	bms1	90	67.846	ENSDORG00000002982	Bms1	80	73.892	Dipodomys_ordii
ENSPMEG00000023176	bms1	77	66.964	ENSETEG00000009554	BMS1	69	72.906	Echinops_telfairi
ENSPMEG00000023176	bms1	94	65.764	ENSEASG00005006894	BMS1	79	75.123	Equus_asinus_asinus
ENSPMEG00000023176	bms1	94	66.602	ENSECAG00000001358	BMS1	79	75.123	Equus_caballus
ENSPMEG00000023176	bms1	94	71.545	ENSELUG00000001756	bms1	99	71.854	Esox_lucius
ENSPMEG00000023176	bms1	91	72.998	ENSFCAG00000011220	BMS1	79	74.631	Felis_catus
ENSPMEG00000023176	bms1	90	69.839	ENSFALG00000006882	BMS1	84	69.677	Ficedula_albicollis
ENSPMEG00000023176	bms1	94	63.818	ENSFDAG00000001422	BMS1	80	73.399	Fukomys_damarensis
ENSPMEG00000023176	bms1	94	86.880	ENSFHEG00000003367	bms1	99	86.448	Fundulus_heteroclitus
ENSPMEG00000023176	bms1	93	70.658	ENSGMOG00000000718	bms1	97	70.121	Gadus_morhua
ENSPMEG00000023176	bms1	90	69.903	ENSGALG00000002624	BMS1	84	69.741	Gallus_gallus
ENSPMEG00000023176	bms1	54	89.169	ENSGAFG00000009067	bms1	96	89.614	Gambusia_affinis
ENSPMEG00000023176	bms1	91	82.334	ENSGACG00000015334	bms1	89	82.334	Gasterosteus_aculeatus
ENSPMEG00000023176	bms1	93	64.804	ENSGAGG00000003467	BMS1	90	67.427	Gopherus_agassizii
ENSPMEG00000023176	bms1	94	78.904	ENSHBUG00000022628	bms1	99	78.500	Haplochromis_burtoni
ENSPMEG00000023176	bms1	94	65.922	ENSHGLG00000000477	BMS1	86	67.223	Heterocephalus_glaber_female
ENSPMEG00000023176	bms1	94	65.922	ENSHGLG00100002176	BMS1	86	67.223	Heterocephalus_glaber_male
ENSPMEG00000023176	bms1	94	77.787	ENSHCOG00000017604	bms1	99	77.419	Hippocampus_comes
ENSPMEG00000023176	bms1	93	81.197	ENSIPUG00000017855	bms1	99	68.845	Ictalurus_punctatus
ENSPMEG00000023176	bms1	93	66.796	ENSSTOG00000015063	BMS1	85	67.857	Ictidomys_tridecemlineatus
ENSPMEG00000023176	bms1	86	72.769	ENSJJAG00000017328	Bms1	85	67.967	Jaculus_jaculus
ENSPMEG00000023176	bms1	61	76.546	ENSKMAG00000021982	bms1	97	76.675	Kryptolebias_marmoratus
ENSPMEG00000023176	bms1	94	76.359	ENSLBEG00000028208	bms1	99	76.214	Labrus_bergylta
ENSPMEG00000023176	bms1	94	57.989	ENSLACG00000001600	BMS1	86	65.281	Latimeria_chalumnae
ENSPMEG00000023176	bms1	51	73.556	ENSLOCG00000012914	bms1	97	70.225	Lepisosteus_oculatus
ENSPMEG00000023176	bms1	93	64.972	ENSLAFG00000006250	BMS1	79	73.645	Loxodonta_africana
ENSPMEG00000023176	bms1	83	65.759	ENSMFAG00000037771	BMS1	88	74.138	Macaca_fascicularis
ENSPMEG00000023176	bms1	83	59.626	ENSMMUG00000007426	-	75	62.450	Macaca_mulatta
ENSPMEG00000023176	bms1	74	52.632	ENSMLEG00000029084	-	70	58.128	Mandrillus_leucophaeus
ENSPMEG00000023176	bms1	94	77.861	ENSMAMG00000020855	bms1	99	76.949	Mastacembelus_armatus
ENSPMEG00000023176	bms1	94	78.952	ENSMZEG00005005663	bms1	99	78.369	Maylandia_zebra
ENSPMEG00000023176	bms1	90	67.811	ENSMGAG00000001170	BMS1	86	69.741	Meleagris_gallopavo
ENSPMEG00000023176	bms1	93	60.835	ENSMAUG00000002195	Bms1	86	66.775	Mesocricetus_auratus
ENSPMEG00000023176	bms1	93	65.458	ENSMICG00000009977	BMS1	79	74.631	Microcebus_murinus
ENSPMEG00000023176	bms1	93	65.887	ENSMOCG00000002038	Bms1	81	74.631	Microtus_ochrogaster
ENSPMEG00000023176	bms1	94	79.195	ENSMMOG00000000977	bms1	99	78.141	Mola_mola
ENSPMEG00000023176	bms1	94	65.291	ENSMODG00000001177	BMS1	78	75.184	Monodelphis_domestica
ENSPMEG00000023176	bms1	94	78.860	ENSMALG00000009680	bms1	99	79.648	Monopterus_albus
ENSPMEG00000023176	bms1	78	59.536	MGP_CAROLIEiJ_G0028785	-	59	77.067	Mus_caroli
ENSPMEG00000023176	bms1	93	61.974	ENSMUSG00000030138	Bms1	85	66.396	Mus_musculus
ENSPMEG00000023176	bms1	89	67.095	MGP_PahariEiJ_G0022539	Bms1	85	66.505	Mus_pahari
ENSPMEG00000023176	bms1	93	62.157	MGP_SPRETEiJ_G0029816	Bms1	85	66.396	Mus_spretus
ENSPMEG00000023176	bms1	92	67.181	ENSMPUG00000017276	BMS1	79	74.877	Mustela_putorius_furo
ENSPMEG00000023176	bms1	94	60.744	ENSMLUG00000003260	BMS1	82	74.020	Myotis_lucifugus
ENSPMEG00000023176	bms1	94	56.872	ENSNGAG00000015258	Bms1	82	67.264	Nannospalax_galili
ENSPMEG00000023176	bms1	92	65.444	ENSNLEG00000015791	BMS1	85	66.390	Nomascus_leucogenys
ENSPMEG00000023176	bms1	81	77.556	ENSOPRG00000005195	BMS1	77	79.459	Ochotona_princeps
ENSPMEG00000023176	bms1	93	66.538	ENSODEG00000005554	BMS1	85	67.355	Octodon_degus
ENSPMEG00000023176	bms1	94	79.385	ENSONIG00000007227	bms1	99	78.304	Oreochromis_niloticus
ENSPMEG00000023176	bms1	93	66.472	ENSOANG00000000662	-	79	74.447	Ornithorhynchus_anatinus
ENSPMEG00000023176	bms1	90	67.258	ENSOCUG00000005354	BMS1	80	75.369	Oryctolagus_cuniculus
ENSPMEG00000023176	bms1	94	79.665	ENSORLG00000014655	bms1	99	79.915	Oryzias_latipes
ENSPMEG00000023176	bms1	94	77.351	ENSORLG00020016246	bms1	99	77.566	Oryzias_latipes_hni
ENSPMEG00000023176	bms1	94	77.933	ENSORLG00015014183	bms1	99	78.571	Oryzias_latipes_hsok
ENSPMEG00000023176	bms1	94	80.033	ENSOMEG00000015042	bms1	99	79.899	Oryzias_melastigma
ENSPMEG00000023176	bms1	94	60.449	ENSOGAG00000006511	BMS1	79	74.510	Otolemur_garnettii
ENSPMEG00000023176	bms1	94	66.603	ENSOARG00000003900	BMS1	80	75.122	Ovis_aries
ENSPMEG00000023176	bms1	91	65.318	ENSPPAG00000027837	BMS1	79	74.384	Pan_paniscus
ENSPMEG00000023176	bms1	94	60.809	ENSPPRG00000001311	BMS1	79	74.631	Panthera_pardus
ENSPMEG00000023176	bms1	94	59.829	ENSPTIG00000009652	BMS1	79	74.631	Panthera_tigris_altaica
ENSPMEG00000023176	bms1	91	66.561	ENSPTRG00000002441	BMS1	80	74.384	Pan_troglodytes
ENSPMEG00000023176	bms1	92	76.236	ENSPKIG00000008165	bms1	89	76.565	Paramormyrops_kingsleyae
ENSPMEG00000023176	bms1	90	66.863	ENSPSIG00000006481	BMS1	84	69.182	Pelodiscus_sinensis
ENSPMEG00000023176	bms1	93	66.398	ENSPEMG00000022467	Bms1	84	65.900	Peromyscus_maniculatus_bairdii
ENSPMEG00000023176	bms1	90	68.336	ENSPCIG00000001339	BMS1	78	74.447	Phascolarctos_cinereus
ENSPMEG00000023176	bms1	91	99.808	ENSPFOG00000015180	bms1	100	99.523	Poecilia_formosa
ENSPMEG00000023176	bms1	96	96.831	ENSPREG00000002695	bms1	99	97.718	Poecilia_reticulata
ENSPMEG00000023176	bms1	52	65.125	ENSPPYG00000002836	-	66	74.384	Pongo_abelii
ENSPMEG00000023176	bms1	69	75.342	ENSPCAG00000014528	BMS1	74	64.887	Procavia_capensis
ENSPMEG00000023176	bms1	88	66.094	ENSPCOG00000023834	-	82	73.684	Propithecus_coquereli
ENSPMEG00000023176	bms1	94	59.516	ENSPVAG00000000725	BMS1	80	73.464	Pteropus_vampyrus
ENSPMEG00000023176	bms1	94	77.787	ENSPNYG00000018866	bms1	99	77.467	Pundamilia_nyererei
ENSPMEG00000023176	bms1	91	77.044	ENSPNAG00000000676	bms1	87	77.778	Pygocentrus_nattereri
ENSPMEG00000023176	bms1	75	65.511	ENSRNOG00000006576	Bms1	82	68.312	Rattus_norvegicus
ENSPMEG00000023176	bms1	92	65.432	ENSRROG00000040101	BMS1	79	70.197	Rhinopithecus_roxellana
ENSPMEG00000023176	bms1	90	67.311	ENSSBOG00000035778	BMS1	85	67.476	Saimiri_boliviensis_boliviensis
ENSPMEG00000023176	bms1	93	64.739	ENSSHAG00000005062	BMS1	78	74.447	Sarcophilus_harrisii
ENSPMEG00000023176	bms1	52	77.112	ENSSFOG00015022313	bms1	82	82.064	Scleropages_formosus
ENSPMEG00000023176	bms1	57	74.966	ENSSMAG00000019966	bms1	99	76.229	Scophthalmus_maximus
ENSPMEG00000023176	bms1	94	79.170	ENSSDUG00000016875	bms1	99	79.414	Seriola_dumerili
ENSPMEG00000023176	bms1	94	78.300	ENSSLDG00000015199	bms1	99	78.462	Seriola_lalandi_dorsalis
ENSPMEG00000023176	bms1	50	73.000	ENSSARG00000014407	BMS1	66	73.000	Sorex_araneus
ENSPMEG00000023176	bms1	93	69.677	ENSSPUG00000014454	BMS1	84	69.854	Sphenodon_punctatus
ENSPMEG00000023176	bms1	94	65.844	ENSSSCG00000010198	BMS1	79	75.369	Sus_scrofa
ENSPMEG00000023176	bms1	90	69.854	ENSTGUG00000006302	-	84	69.692	Taeniopygia_guttata
ENSPMEG00000023176	bms1	94	72.811	ENSTRUG00000008028	bms1	98	73.271	Takifugu_rubripes
ENSPMEG00000023176	bms1	94	74.634	ENSTNIG00000006216	bms1	82	82.160	Tetraodon_nigroviridis
ENSPMEG00000023176	bms1	62	67.687	ENSTBEG00000001673	-	62	67.698	Tupaia_belangeri
ENSPMEG00000023176	bms1	94	60.748	ENSTTRG00000007983	BMS1	77	79.459	Tursiops_truncatus
ENSPMEG00000023176	bms1	92	65.891	ENSUAMG00000023996	BMS1	79	74.877	Ursus_americanus
ENSPMEG00000023176	bms1	92	65.581	ENSUMAG00000016523	BMS1	79	74.877	Ursus_maritimus
ENSPMEG00000023176	bms1	76	71.379	ENSVPAG00000007477	BMS1	74	70.905	Vicugna_pacos
ENSPMEG00000023176	bms1	92	67.181	ENSVVUG00000021305	BMS1	81	74.631	Vulpes_vulpes
ENSPMEG00000023176	bms1	93	62.296	ENSXETG00000008158	bms1	84	71.814	Xenopus_tropicalis
ENSPMEG00000023176	bms1	95	92.546	ENSXCOG00000000506	bms1	96	97.783	Xiphophorus_couchianus
ENSPMEG00000023176	bms1	95	96.441	ENSXMAG00000014236	bms1	100	96.441	Xiphophorus_maculatus