EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPMEG00000023625 (Gene tree)
Gene ID: 106917887
Gene Symbol: -
Alias: -
Full Name: threonine--tRNA ligase%2C cytoplasmic-like
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Minus strand
Length: 18414 bases
Position: chrKQ551256.1:121416-139829
Accession: 106917887
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000020450	tRNA_SAD	PF07973.14	0.00017	1	1
ENSPMEP00000020450	HGTP_anticodon	PF03129.20	5.3e-16	1	1
ENSPMEP00000020450	tRNA-synt_2b	PF00587.25	3.3e-37	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000035058	-	4031	XM_014987181	ENSPMEP00000020450	690 (aa)	XP_014842667	UPI00072E921D

Gene Model

Click here to download ENSPMEG00000023625's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000023625's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPMEG00000023625	-	96	54.030	ENSPMEG00000011154	tarsl2	82	54.030
ENSPMEG00000023625	-	97	54.639	ENSPMEG00000016101	tars	94	54.639

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000023625	-	96	53.949	ENSG00000185418	TARSL2	95	50.000	Homo_sapiens
ENSPMEG00000023625	-	62	79.765	ENSAPOG00000015706	-	100	79.765	Acanthochromis_polyacanthus
ENSPMEG00000023625	-	96	53.492	ENSAMEG00000003074	TARSL2	86	53.046	Ailuropoda_melanoleuca
ENSPMEG00000023625	-	64	90.950	ENSACIG00000007759	-	95	91.304	Amphilophus_citrinellus
ENSPMEG00000023625	-	62	85.047	ENSAOCG00000012359	-	99	85.047	Amphiprion_ocellaris
ENSPMEG00000023625	-	62	81.176	ENSAPEG00000007512	-	100	81.176	Amphiprion_percula
ENSPMEG00000023625	-	100	82.709	ENSATEG00000023568	-	100	82.709	Anabas_testudineus
ENSPMEG00000023625	-	96	54.559	ENSAPLG00000008485	TARSL2	93	54.410	Anas_platyrhynchos
ENSPMEG00000023625	-	97	41.228	ENSACAG00000000199	TARSL2	90	41.082	Anolis_carolinensis
ENSPMEG00000023625	-	96	52.593	ENSACAG00000003076	-	99	52.593	Anolis_carolinensis
ENSPMEG00000023625	-	96	50.222	ENSANAG00000020687	TARSL2	86	50.711	Aotus_nancymaae
ENSPMEG00000023625	-	100	84.006	ENSACLG00000020262	-	100	84.006	Astatotilapia_calliptera
ENSPMEG00000023625	-	98	72.552	ENSAMXG00000012533	-	97	72.552	Astyanax_mexicanus
ENSPMEG00000023625	-	96	52.155	ENSBTAG00000007651	TARSL2	84	51.714	Bos_taurus
ENSPMEG00000023625	-	95	62.814	ENSCJAG00000017350	TARSL2	77	62.814	Callithrix_jacchus
ENSPMEG00000023625	-	95	53.233	ENSCAFG00000010453	TARSL2	83	52.782	Canis_familiaris
ENSPMEG00000023625	-	98	52.187	ENSCAFG00020020868	TARSL2	98	55.263	Canis_lupus_dingo
ENSPMEG00000023625	-	83	52.048	ENSCHIG00000015264	TARSL2	81	51.706	Capra_hircus
ENSPMEG00000023625	-	96	52.452	ENSTSYG00000004538	TARSL2	95	52.155	Carlito_syrichta
ENSPMEG00000023625	-	94	46.293	ENSCAPG00000004815	TARSL2	99	45.991	Cavia_aperea
ENSPMEG00000023625	-	96	53.204	ENSCPOG00000008850	TARSL2	95	52.906	Cavia_porcellus
ENSPMEG00000023625	-	96	53.245	ENSCCAG00000030068	TARSL2	83	53.931	Cebus_capucinus
ENSPMEG00000023625	-	95	53.453	ENSCATG00000037383	TARSL2	86	53.003	Cercocebus_atys
ENSPMEG00000023625	-	96	52.906	ENSCLAG00000016873	TARSL2	87	52.608	Chinchilla_lanigera
ENSPMEG00000023625	-	95	53.303	ENSCSAG00000016828	TARSL2	83	52.853	Chlorocebus_sabaeus
ENSPMEG00000023625	-	89	52.724	ENSCHOG00000001319	TARSL2	95	52.724	Choloepus_hoffmanni
ENSPMEG00000023625	-	96	53.492	ENSCPBG00000010792	TARSL2	85	53.343	Chrysemys_picta_bellii
ENSPMEG00000023625	-	95	53.453	ENSCANG00000035438	TARSL2	93	53.003	Colobus_angolensis_palliatus
ENSPMEG00000023625	-	96	53.471	ENSCGRG00001020827	Tarsl2	85	53.028	Cricetulus_griseus_chok1gshd
ENSPMEG00000023625	-	96	53.789	ENSCGRG00000011398	Tarsl2	93	53.343	Cricetulus_griseus_crigri
ENSPMEG00000023625	-	99	78.468	ENSCSEG00000002562	-	99	85.446	Cynoglossus_semilaevis
ENSPMEG00000023625	-	62	94.419	ENSCVAG00000009253	-	99	94.419	Cyprinodon_variegatus
ENSPMEG00000023625	-	61	78.487	ENSDARG00000075385	LO017852.1	99	78.487	Danio_rerio
ENSPMEG00000023625	-	96	52.155	ENSDNOG00000046161	TARSL2	96	51.709	Dasypus_novemcinctus
ENSPMEG00000023625	-	96	53.513	ENSDORG00000009653	Tarsl2	95	53.214	Dipodomys_ordii
ENSPMEG00000023625	-	96	53.502	ENSEASG00005017718	TARSL2	84	53.055	Equus_asinus_asinus
ENSPMEG00000023625	-	96	53.502	ENSECAG00000024315	TARSL2	84	53.055	Equus_caballus
ENSPMEG00000023625	-	87	56.198	ENSEEUG00000014117	TARSL2	99	55.868	Erinaceus_europaeus
ENSPMEG00000023625	-	100	73.919	ENSELUG00000013552	-	100	73.919	Esox_lucius
ENSPMEG00000023625	-	96	54.086	ENSFCAG00000008836	TARSL2	83	53.640	Felis_catus
ENSPMEG00000023625	-	97	54.277	ENSFALG00000012444	TARSL2	91	54.277	Ficedula_albicollis
ENSPMEG00000023625	-	96	51.647	ENSFDAG00000002767	TARSL2	95	51.647	Fukomys_damarensis
ENSPMEG00000023625	-	64	94.131	ENSFHEG00000021877	-	81	94.131	Fundulus_heteroclitus
ENSPMEG00000023625	-	98	76.479	ENSGMOG00000006184	-	100	75.575	Gadus_morhua
ENSPMEG00000023625	-	97	54.130	ENSGALG00000003985	TARSL2	86	53.982	Gallus_gallus
ENSPMEG00000023625	-	96	54.247	ENSGALG00000043416	-	93	64.838	Gallus_gallus
ENSPMEG00000023625	-	100	95.362	ENSGAFG00000012691	-	100	95.362	Gambusia_affinis
ENSPMEG00000023625	-	100	82.609	ENSGACG00000011734	-	100	82.609	Gasterosteus_aculeatus
ENSPMEG00000023625	-	96	53.046	ENSGAGG00000010775	TARSL2	85	52.897	Gopherus_agassizii
ENSPMEG00000023625	-	96	53.800	ENSGGOG00000007839	TARSL2	86	53.353	Gorilla_gorilla
ENSPMEG00000023625	-	100	84.294	ENSHBUG00000003411	-	100	84.294	Haplochromis_burtoni
ENSPMEG00000023625	-	96	52.985	ENSHGLG00000011618	TARSL2	85	52.687	Heterocephalus_glaber_female
ENSPMEG00000023625	-	96	52.985	ENSHGLG00100016769	TARSL2	95	52.687	Heterocephalus_glaber_male
ENSPMEG00000023625	-	100	76.445	ENSHCOG00000014119	-	99	76.445	Hippocampus_comes
ENSPMEG00000023625	-	62	73.647	ENSIPUG00000000099	-	100	73.647	Ictalurus_punctatus
ENSPMEG00000023625	-	97	53.019	ENSSTOG00000032725	TARSL2	84	53.055	Ictidomys_tridecemlineatus
ENSPMEG00000023625	-	100	84.104	ENSKMAG00000001354	-	100	84.104	Kryptolebias_marmoratus
ENSPMEG00000023625	-	62	85.882	ENSLBEG00000026238	-	100	85.882	Labrus_bergylta
ENSPMEG00000023625	-	96	53.353	ENSLAFG00000011941	TARSL2	99	52.897	Loxodonta_africana
ENSPMEG00000023625	-	95	53.303	ENSMFAG00000001902	TARSL2	83	52.853	Macaca_fascicularis
ENSPMEG00000023625	-	95	53.453	ENSMMUG00000000278	TARSL2	83	53.003	Macaca_mulatta
ENSPMEG00000023625	-	95	53.303	ENSMNEG00000034952	TARSL2	83	52.853	Macaca_nemestrina
ENSPMEG00000023625	-	95	53.303	ENSMLEG00000035535	TARSL2	95	52.853	Mandrillus_leucophaeus
ENSPMEG00000023625	-	100	82.997	ENSMAMG00000015032	-	100	82.997	Mastacembelus_armatus
ENSPMEG00000023625	-	100	84.006	ENSMZEG00005015989	-	100	84.006	Maylandia_zebra
ENSPMEG00000023625	-	88	63.128	ENSMGAG00000004951	TARSL2	98	63.128	Meleagris_gallopavo
ENSPMEG00000023625	-	87	61.917	ENSMAUG00000015756	Tarsl2	83	61.917	Mesocricetus_auratus
ENSPMEG00000023625	-	97	52.941	ENSMICG00000013039	TARSL2	99	52.500	Microcebus_murinus
ENSPMEG00000023625	-	96	54.030	ENSMOCG00000014909	Tarsl2	85	53.582	Microtus_ochrogaster
ENSPMEG00000023625	-	64	86.333	ENSMMOG00000016135	-	100	86.333	Mola_mola
ENSPMEG00000023625	-	96	52.765	ENSMODG00000011941	TARSL2	83	52.616	Monodelphis_domestica
ENSPMEG00000023625	-	99	78.714	ENSMALG00000007340	-	99	78.714	Monopterus_albus
ENSPMEG00000023625	-	96	53.582	MGP_CAROLIEiJ_G0029834	Tarsl2	85	53.134	Mus_caroli
ENSPMEG00000023625	-	96	53.284	ENSMUSG00000030515	Tarsl2	85	52.836	Mus_musculus
ENSPMEG00000023625	-	96	53.433	MGP_PahariEiJ_G0013059	Tarsl2	85	52.985	Mus_pahari
ENSPMEG00000023625	-	96	54.247	ENSMPUG00000011032	TARSL2	86	53.800	Mustela_putorius_furo
ENSPMEG00000023625	-	82	52.749	ENSMLUG00000024482	-	97	52.405	Myotis_lucifugus
ENSPMEG00000023625	-	98	51.594	ENSMLUG00000012870	-	86	51.304	Myotis_lucifugus
ENSPMEG00000023625	-	96	52.537	ENSNGAG00000020451	Tarsl2	84	52.239	Nannospalax_galili
ENSPMEG00000023625	-	96	85.822	ENSNBRG00000003429	-	97	85.822	Neolamprologus_brichardi
ENSPMEG00000023625	-	96	53.353	ENSNLEG00000000541	TARSL2	84	52.906	Nomascus_leucogenys
ENSPMEG00000023625	-	81	49.291	ENSMEUG00000002935	TARSL2	70	49.113	Notamacropus_eugenii
ENSPMEG00000023625	-	72	46.400	ENSOPRG00000002689	-	62	46.400	Ochotona_princeps
ENSPMEG00000023625	-	97	53.088	ENSODEG00000014454	TARSL2	85	52.794	Octodon_degus
ENSPMEG00000023625	-	97	84.731	ENSONIG00000006402	-	100	84.731	Oreochromis_niloticus
ENSPMEG00000023625	-	96	52.096	ENSOANG00000013263	TARSL2	99	51.946	Ornithorhynchus_anatinus
ENSPMEG00000023625	-	97	53.166	ENSOCUG00000010740	TARSL2	95	52.872	Oryctolagus_cuniculus
ENSPMEG00000023625	-	100	79.256	ENSORLG00000010391	-	100	79.256	Oryzias_latipes
ENSPMEG00000023625	-	100	80.463	ENSORLG00020008928	-	100	80.463	Oryzias_latipes_hni
ENSPMEG00000023625	-	100	80.318	ENSORLG00015014897	-	100	80.318	Oryzias_latipes_hsok
ENSPMEG00000023625	-	100	81.214	ENSOMEG00000009022	-	100	81.214	Oryzias_melastigma
ENSPMEG00000023625	-	96	52.167	ENSOGAG00000014311	TARSL2	83	51.719	Otolemur_garnettii
ENSPMEG00000023625	-	96	51.565	ENSOARG00000016573	TARSL2	95	51.267	Ovis_aries
ENSPMEG00000023625	-	96	53.651	ENSPPAG00000040066	TARSL2	97	53.204	Pan_paniscus
ENSPMEG00000023625	-	96	53.789	ENSPPRG00000017275	TARSL2	84	53.343	Panthera_pardus
ENSPMEG00000023625	-	96	53.789	ENSPTIG00000015184	TARSL2	84	53.343	Panthera_tigris_altaica
ENSPMEG00000023625	-	96	53.800	ENSPTRG00000007516	TARSL2	84	53.353	Pan_troglodytes
ENSPMEG00000023625	-	95	51.551	ENSPANG00000022401	TARSL2	83	51.108	Papio_anubis
ENSPMEG00000023625	-	97	68.366	ENSPKIG00000010658	-	99	75.059	Paramormyrops_kingsleyae
ENSPMEG00000023625	-	83	55.401	ENSPSIG00000008419	TARSL2	99	55.226	Pelodiscus_sinensis
ENSPMEG00000023625	-	63	84.332	ENSPMGG00000007785	-	99	84.332	Periophthalmus_magnuspinnatus
ENSPMEG00000023625	-	96	53.284	ENSPEMG00000019852	Tarsl2	91	52.836	Peromyscus_maniculatus_bairdii
ENSPMEG00000023625	-	96	52.915	ENSPCIG00000022481	TARSL2	83	52.765	Phascolarctos_cinereus
ENSPMEG00000023625	-	96	98.647	ENSPFOG00000013444	-	100	98.647	Poecilia_formosa
ENSPMEG00000023625	-	100	98.841	ENSPLAG00000018145	-	100	98.841	Poecilia_latipinna
ENSPMEG00000023625	-	62	95.059	ENSPREG00000017312	-	100	95.059	Poecilia_reticulata
ENSPMEG00000023625	-	84	62.370	ENSPPYG00000006830	TARSL2	81	62.370	Pongo_abelii
ENSPMEG00000023625	-	87	51.730	ENSPCAG00000011132	TARSL2	76	51.151	Procavia_capensis
ENSPMEG00000023625	-	97	39.296	ENSPCOG00000026095	TARSL2	83	39.150	Propithecus_coquereli
ENSPMEG00000023625	-	87	52.646	ENSPVAG00000012240	TARSL2	84	40.000	Pteropus_vampyrus
ENSPMEG00000023625	-	100	84.150	ENSPNYG00000004232	-	100	84.150	Pundamilia_nyererei
ENSPMEG00000023625	-	98	72.485	ENSPNAG00000002308	-	97	72.485	Pygocentrus_nattereri
ENSPMEG00000023625	-	60	48.341	ENSRNOG00000024460	Tarsl2	76	47.630	Rattus_norvegicus
ENSPMEG00000023625	-	95	53.453	ENSRBIG00000035707	TARSL2	86	53.003	Rhinopithecus_bieti
ENSPMEG00000023625	-	95	53.303	ENSRROG00000029492	TARSL2	86	52.853	Rhinopithecus_roxellana
ENSPMEG00000023625	-	96	53.097	ENSSBOG00000029807	TARSL2	97	52.655	Saimiri_boliviensis_boliviensis
ENSPMEG00000023625	-	96	53.433	ENSSHAG00000010266	TARSL2	89	53.284	Sarcophilus_harrisii
ENSPMEG00000023625	-	97	70.045	ENSSFOG00015022086	tars2	97	70.045	Scleropages_formosus
ENSPMEG00000023625	-	97	81.832	ENSSMAG00000015682	-	97	81.832	Scophthalmus_maximus
ENSPMEG00000023625	-	63	88.889	ENSSDUG00000007180	-	99	88.889	Seriola_dumerili
ENSPMEG00000023625	-	62	89.671	ENSSLDG00000015367	-	99	89.671	Seriola_lalandi_dorsalis
ENSPMEG00000023625	-	59	67.407	ENSSPUG00000001523	TARSL2	99	65.035	Sphenodon_punctatus
ENSPMEG00000023625	-	100	79.855	ENSSPAG00000018887	-	100	79.855	Stegastes_partitus
ENSPMEG00000023625	-	91	52.283	ENSSSCG00000005781	TARSL2	95	52.126	Sus_scrofa
ENSPMEG00000023625	-	96	53.961	ENSTGUG00000005726	TARSL2	99	53.961	Taeniopygia_guttata
ENSPMEG00000023625	-	62	60.280	ENSTGUG00000004602	-	98	60.613	Taeniopygia_guttata
ENSPMEG00000023625	-	62	88.967	ENSTRUG00000015004	-	99	88.967	Takifugu_rubripes
ENSPMEG00000023625	-	99	73.938	ENSTNIG00000008060	-	100	73.654	Tetraodon_nigroviridis
ENSPMEG00000023625	-	80	59.444	ENSTBEG00000001134	-	74	59.444	Tupaia_belangeri
ENSPMEG00000023625	-	96	52.012	ENSTTRG00000016207	TARSL2	96	51.714	Tursiops_truncatus
ENSPMEG00000023625	-	96	53.651	ENSUMAG00000024371	TARSL2	99	56.584	Ursus_maritimus
ENSPMEG00000023625	-	96	53.204	ENSVVUG00000014742	TARSL2	97	52.757	Vulpes_vulpes
ENSPMEG00000023625	-	65	95.565	ENSXCOG00000019508	-	97	97.115	Xiphophorus_couchianus
ENSPMEG00000023625	-	100	95.507	ENSXMAG00000016382	-	100	95.507	Xiphophorus_maculatus