EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPMEG00000023638 (Gene tree)
Gene ID: 106908377
Gene Symbol: srsf4
Alias: -
Full Name: serine/arginine-rich splicing factor 4-like
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Plus strand
Length: 4026 bases
Position: chrKQ553769.1:24579-28604
Accession: 106908377
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000020324	RRM_1	PF00076.22	3.5e-32	1	2
ENSPMEP00000020324	RRM_1	PF00076.22	3.5e-32	2	2
ENSPMEP00000020297	RRM_1	PF00076.22	8.2e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000029949	-	1035	XM_014974454	ENSPMEP00000020324	344 (aa)	XP_014829940	-
ENSPMET00000029900	-	783	-	ENSPMEP00000020297	260 (aa)	-	-

Gene Model

Click here to download ENSPMEG00000023638's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000023638's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPMEG00000023638	srsf4	53	73.913	ENSPMEG00000006042	SRSF6	53	76.471
ENSPMEG00000023638	srsf4	51	65.193	ENSPMEG00000012751	srsf5b	82	63.200
ENSPMEG00000023638	srsf4	52	40.000	ENSPMEG00000008809	srsf9	74	42.408
ENSPMEG00000023638	srsf4	52	61.702	ENSPMEG00000016339	srsf5a	59	60.714

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000023638	srsf4	53	85.246	ENSG00000116350	SRSF4	69	77.419	Homo_sapiens
ENSPMEG00000023638	srsf4	83	95.652	ENSAPOG00000020244	srsf4	70	98.507	Acanthochromis_polyacanthus
ENSPMEG00000023638	srsf4	84	59.107	ENSAPOG00000023399	-	60	76.374	Acanthochromis_polyacanthus
ENSPMEG00000023638	srsf4	81	95.652	ENSACIG00000018649	srsf4	91	95.588	Amphilophus_citrinellus
ENSPMEG00000023638	srsf4	61	64.167	ENSAPEG00000020826	srsf4	75	67.083	Amphiprion_percula
ENSPMEG00000023638	srsf4	70	92.647	ENSATEG00000005680	srsf4	60	93.370	Anabas_testudineus
ENSPMEG00000023638	srsf4	84	95.652	ENSACLG00000003395	srsf4	71	98.507	Astatotilapia_calliptera
ENSPMEG00000023638	srsf4	68	86.957	ENSAMXG00000034811	srsf4	98	88.235	Astyanax_mexicanus
ENSPMEG00000023638	srsf4	52	51.759	WBGene00004698	rsp-1	97	53.741	Caenorhabditis_elegans
ENSPMEG00000023638	srsf4	52	60.199	ENSCING00000012370	-	68	63.000	Ciona_intestinalis
ENSPMEG00000023638	srsf4	51	55.670	ENSCING00000011362	-	65	60.109	Ciona_intestinalis
ENSPMEG00000023638	srsf4	52	59.585	ENSCING00000020631	-	79	61.658	Ciona_intestinalis
ENSPMEG00000023638	srsf4	96	44.798	ENSCING00000024718	-	56	56.923	Ciona_intestinalis
ENSPMEG00000023638	srsf4	52	66.292	ENSCSAVG00000002581	-	70	64.641	Ciona_savignyi
ENSPMEG00000023638	srsf4	63	94.203	ENSCSEG00000010058	srsf4	78	98.507	Cynoglossus_semilaevis
ENSPMEG00000023638	srsf4	86	60.729	ENSCVAG00000004342	srsf4	85	62.753	Cyprinodon_variegatus
ENSPMEG00000023638	srsf4	97	89.855	ENSDARG00000105293	srsf4	80	88.235	Danio_rerio
ENSPMEG00000023638	srsf4	55	61.856	FBgn0004587	B52	97	57.778	Drosophila_melanogaster
ENSPMEG00000023638	srsf4	52	60.556	ENSEBUG00000001681	srsf4	67	60.556	Eptatretus_burgeri
ENSPMEG00000023638	srsf4	53	74.619	ENSELUG00000017551	srsf4	95	75.940	Esox_lucius
ENSPMEG00000023638	srsf4	86	95.652	ENSFHEG00000007472	srsf4	91	98.824	Fundulus_heteroclitus
ENSPMEG00000023638	srsf4	99	91.209	ENSGAFG00000018496	srsf4	100	91.209	Gambusia_affinis
ENSPMEG00000023638	srsf4	53	91.803	ENSGACG00000002389	srsf4	56	89.840	Gasterosteus_aculeatus
ENSPMEG00000023638	srsf4	53	76.374	ENSHBUG00000011326	-	51	75.393	Haplochromis_burtoni
ENSPMEG00000023638	srsf4	83	94.203	ENSHCOG00000012540	srsf4	80	98.485	Hippocampus_comes
ENSPMEG00000023638	srsf4	53	85.246	ENSSTOG00000015908	SRSF4	60	65.595	Ictidomys_tridecemlineatus
ENSPMEG00000023638	srsf4	91	92.754	ENSKMAG00000013631	srsf4	81	95.522	Kryptolebias_marmoratus
ENSPMEG00000023638	srsf4	52	75.138	ENSLOCG00000001442	-	50	79.679	Lepisosteus_oculatus
ENSPMEG00000023638	srsf4	94	95.652	ENSMAMG00000004888	srsf4	93	95.588	Mastacembelus_armatus
ENSPMEG00000023638	srsf4	84	95.652	ENSMZEG00005026275	srsf4	71	98.507	Maylandia_zebra
ENSPMEG00000023638	srsf4	81	95.652	ENSMMOG00000013653	srsf4	94	95.588	Mola_mola
ENSPMEG00000023638	srsf4	53	85.714	ENSMODG00000011052	SRSF4	78	65.584	Monodelphis_domestica
ENSPMEG00000023638	srsf4	95	95.652	ENSMALG00000013392	srsf4	94	95.588	Monopterus_albus
ENSPMEG00000023638	srsf4	70	86.957	ENSNGAG00000012225	Srsf4	64	62.500	Nannospalax_galili
ENSPMEG00000023638	srsf4	53	69.565	ENSNLEG00000030787	-	62	69.565	Nomascus_leucogenys
ENSPMEG00000023638	srsf4	53	90.659	ENSONIG00000013730	srsf4	77	98.507	Oreochromis_niloticus
ENSPMEG00000023638	srsf4	53	92.391	ENSORLG00020016052	srsf4	66	95.055	Oryzias_latipes_hni
ENSPMEG00000023638	srsf4	94	95.652	ENSORLG00015007566	srsf4	93	95.588	Oryzias_latipes_hsok
ENSPMEG00000023638	srsf4	91	95.652	ENSOMEG00000005541	srsf4	76	98.507	Oryzias_melastigma
ENSPMEG00000023638	srsf4	53	87.435	ENSPMGG00000013436	srsf4	95	94.118	Periophthalmus_magnuspinnatus
ENSPMEG00000023638	srsf4	99	91.304	ENSPFOG00000001306	srsf4	100	91.304	Poecilia_formosa
ENSPMEG00000023638	srsf4	100	97.414	ENSPLAG00000008812	srsf4	100	97.414	Poecilia_latipinna
ENSPMEG00000023638	srsf4	91	95.652	ENSPREG00000009639	srsf4	92	95.652	Poecilia_reticulata
ENSPMEG00000023638	srsf4	53	91.257	ENSPNYG00000003796	srsf4	74	98.507	Pundamilia_nyererei
ENSPMEG00000023638	srsf4	52	89.385	ENSPNAG00000023844	srsf4	53	89.503	Pygocentrus_nattereri
ENSPMEG00000023638	srsf4	58	82.915	ENSSFOG00015020292	srsf4	93	82.828	Scleropages_formosus
ENSPMEG00000023638	srsf4	53	91.489	ENSSMAG00000001707	srsf4	50	94.086	Scophthalmus_maximus
ENSPMEG00000023638	srsf4	98	95.652	ENSSDUG00000007387	srsf4	79	98.507	Seriola_dumerili
ENSPMEG00000023638	srsf4	53	77.049	ENSSLDG00000009745	srsf4	61	76.923	Seriola_lalandi_dorsalis
ENSPMEG00000023638	srsf4	88	95.652	ENSSPAG00000014538	srsf4	81	95.588	Stegastes_partitus
ENSPMEG00000023638	srsf4	86	92.754	ENSTRUG00000011891	srsf4	98	68.649	Takifugu_rubripes
ENSPMEG00000023638	srsf4	53	92.935	ENSTNIG00000005573	srsf4	78	97.015	Tetraodon_nigroviridis
ENSPMEG00000023638	srsf4	53	85.246	ENSUAMG00000006106	SRSF4	52	71.756	Ursus_americanus
ENSPMEG00000023638	srsf4	95	92.097	ENSXCOG00000018826	srsf4	95	91.603	Xiphophorus_couchianus
ENSPMEG00000023638	srsf4	53	71.809	ENSXCOG00000003212	-	55	73.822	Xiphophorus_couchianus
ENSPMEG00000023638	srsf4	74	80.000	ENSXMAG00000005545	srsf4	76	78.814	Xiphophorus_maculatus