EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPMEG00000023737 (Gene tree)
Gene ID: 106923644
Gene Symbol: -
Alias: -
Full Name: probable ATP-dependent RNA helicase DDX6
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Minus strand
Length: 17098 bases
Position: chrKQ551015.1:734331-751428
Accession: 106923644
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000034465	DEAD	PF00270.29	2.7e-42	1	1
ENSPMEP00000020560	DEAD	PF00270.29	3.2e-42	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000035100	-	1338	-	ENSPMEP00000034465	445 (aa)	-	-
ENSPMET00000030219	-	6442	XM_014996861	ENSPMEP00000020560	479 (aa)	XP_014852347	UPI00072E7205

Gene Model

Click here to download ENSPMEG00000023737's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000023737's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPMEG00000023737	-	72	30.337	ENSPMEG00000018534	ddx5	56	30.337
ENSPMEG00000023737	-	72	31.148	ENSPMEG00000002976	ddx4	58	31.148
ENSPMEG00000023737	-	73	34.078	ENSPMEG00000016243	ddx49	75	34.078
ENSPMEG00000023737	-	81	32.915	ENSPMEG00000005998	ddx20	52	32.915
ENSPMEG00000023737	-	70	40.678	ENSPMEG00000011140	ddx1	55	40.678
ENSPMEG00000023737	-	69	32.153	ENSPMEG00000009339	-	52	32.153
ENSPMEG00000023737	-	78	31.436	ENSPMEG00000006724	-	57	30.695
ENSPMEG00000023737	-	82	35.338	ENSPMEG00000010187	DDX39A	93	35.338
ENSPMEG00000023737	-	81	31.954	ENSPMEG00000015385	ddx23	54	31.963
ENSPMEG00000023737	-	79	30.971	ENSPMEG00000018616	ddx47	76	30.971
ENSPMEG00000023737	-	77	39.247	ENSPMEG00000002124	eif4a1b	92	39.247
ENSPMEG00000023737	-	78	37.566	ENSPMEG00000008078	eif4a3	92	37.566
ENSPMEG00000023737	-	76	36.649	ENSPMEG00000022994	zgc:193690	77	36.649
ENSPMEG00000023737	-	82	35.088	ENSPMEG00000021471	-	93	35.088
ENSPMEG00000023737	-	75	35.809	ENSPMEG00000000930	ddx19	84	35.809
ENSPMEG00000023737	-	67	31.722	ENSPMEG00000014773	ddx18	53	31.722
ENSPMEG00000023737	-	77	31.552	ENSPMEG00000014025	-	65	31.552
ENSPMEG00000023737	-	74	37.398	ENSPMEG00000018826	zgc:193690	82	37.398
ENSPMEG00000023737	-	72	30.618	ENSPMEG00000011703	DDX5	56	30.618
ENSPMEG00000023737	-	76	30.239	ENSPMEG00000003394	DDX41	59	31.165
ENSPMEG00000023737	-	77	40.323	ENSPMEG00000018554	eif4a2	90	40.323
ENSPMEG00000023737	-	96	82.563	ENSPMEG00000019775	ddx6	98	82.563

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000023737	-	98	86.848	ENSAPOG00000014829	ddx61	98	86.848	Acanthochromis_polyacanthus
ENSPMEG00000023737	-	78	95.733	ENSAPOG00000023627	-	95	95.733	Acanthochromis_polyacanthus
ENSPMEG00000023737	-	100	92.070	ENSACIG00000018355	-	100	92.070	Amphilophus_citrinellus
ENSPMEG00000023737	-	100	92.041	ENSAOCG00000006269	-	100	92.638	Amphiprion_ocellaris
ENSPMEG00000023737	-	98	87.657	ENSAOCG00000007627	ddx61	98	87.657	Amphiprion_ocellaris
ENSPMEG00000023737	-	100	92.041	ENSAPEG00000020642	-	100	92.638	Amphiprion_percula
ENSPMEG00000023737	-	100	92.041	ENSAPEG00000021368	-	100	92.638	Amphiprion_percula
ENSPMEG00000023737	-	98	87.657	ENSAPEG00000007293	ddx61	98	87.657	Amphiprion_percula
ENSPMEG00000023737	-	100	91.207	ENSATEG00000005424	-	100	91.207	Anabas_testudineus
ENSPMEG00000023737	-	96	88.009	ENSATEG00000011302	ddx61	99	86.287	Anabas_testudineus
ENSPMEG00000023737	-	100	93.033	ENSACLG00000003260	-	100	93.033	Astatotilapia_calliptera
ENSPMEG00000023737	-	98	86.486	ENSACLG00000027620	ddx61	99	86.486	Astatotilapia_calliptera
ENSPMEG00000023737	-	98	89.770	ENSAMXG00000033980	-	97	89.770	Astyanax_mexicanus
ENSPMEG00000023737	-	96	88.034	ENSAMXG00000032542	ddx61	99	86.335	Astyanax_mexicanus
ENSPMEG00000023737	-	100	91.020	ENSCSEG00000009893	-	100	91.020	Cynoglossus_semilaevis
ENSPMEG00000023737	-	100	96.273	ENSCVAG00000011006	-	100	96.273	Cyprinodon_variegatus
ENSPMEG00000023737	-	98	86.792	ENSDARG00000018425	ddx61	98	86.792	Danio_rerio
ENSPMEG00000023737	-	98	89.813	ENSELUG00000022538	-	98	89.813	Esox_lucius
ENSPMEG00000023737	-	98	88.703	ENSELUG00000020545	ddx61	98	88.703	Esox_lucius
ENSPMEG00000023737	-	100	96.480	ENSFHEG00000015487	-	100	96.480	Fundulus_heteroclitus
ENSPMEG00000023737	-	96	87.686	ENSGMOG00000013762	ddx61	99	86.458	Gadus_morhua
ENSPMEG00000023737	-	71	85.410	ENSGMOG00000003561	-	100	86.850	Gadus_morhua
ENSPMEG00000023737	-	100	98.758	ENSGAFG00000015865	-	100	98.758	Gambusia_affinis
ENSPMEG00000023737	-	98	85.537	ENSGACG00000003401	ddx61	100	85.537	Gasterosteus_aculeatus
ENSPMEG00000023737	-	99	90.476	ENSGACG00000002413	-	100	90.476	Gasterosteus_aculeatus
ENSPMEG00000023737	-	100	93.033	ENSHBUG00000017033	-	100	93.033	Haplochromis_burtoni
ENSPMEG00000023737	-	98	86.694	ENSHBUG00000017832	ddx61	99	86.694	Haplochromis_burtoni
ENSPMEG00000023737	-	98	84.926	ENSHCOG00000008184	ddx61	98	84.926	Hippocampus_comes
ENSPMEG00000023737	-	100	86.735	ENSHCOG00000012238	-	100	86.735	Hippocampus_comes
ENSPMEG00000023737	-	96	85.961	ENSIPUG00000012823	DDX6	98	84.778	Ictalurus_punctatus
ENSPMEG00000023737	-	98	87.841	ENSIPUG00000008367	-	99	87.841	Ictalurus_punctatus
ENSPMEG00000023737	-	100	93.840	ENSKMAG00000007213	-	100	93.840	Kryptolebias_marmoratus
ENSPMEG00000023737	-	100	89.315	ENSLBEG00000016890	-	100	89.919	Labrus_bergylta
ENSPMEG00000023737	-	98	87.083	ENSLBEG00000001740	ddx61	99	87.083	Labrus_bergylta
ENSPMEG00000023737	-	98	85.062	ENSLACG00000015214	ddx61	100	85.062	Latimeria_chalumnae
ENSPMEG00000023737	-	96	51.591	ENSLOCG00000004352	ddx61	95	52.273	Lepisosteus_oculatus
ENSPMEG00000023737	-	96	89.126	ENSMAMG00000005321	ddx61	96	89.126	Mastacembelus_armatus
ENSPMEG00000023737	-	100	92.041	ENSMAMG00000005559	-	100	92.041	Mastacembelus_armatus
ENSPMEG00000023737	-	100	93.033	ENSMZEG00005026268	-	100	93.033	Maylandia_zebra
ENSPMEG00000023737	-	98	86.694	ENSMZEG00005003556	ddx61	99	86.694	Maylandia_zebra
ENSPMEG00000023737	-	96	87.633	ENSMMOG00000007415	ddx61	97	87.633	Mola_mola
ENSPMEG00000023737	-	74	76.487	ENSMMOG00000008825	-	92	76.487	Mola_mola
ENSPMEG00000023737	-	100	82.004	ENSMMOG00000013694	-	100	82.004	Mola_mola
ENSPMEG00000023737	-	100	91.242	ENSMALG00000013817	-	100	91.242	Monopterus_albus
ENSPMEG00000023737	-	98	81.920	ENSMALG00000013776	ddx61	96	81.920	Monopterus_albus
ENSPMEG00000023737	-	100	92.952	ENSNBRG00000015075	-	100	92.952	Neolamprologus_brichardi
ENSPMEG00000023737	-	98	86.130	ENSNBRG00000015800	ddx61	99	86.130	Neolamprologus_brichardi
ENSPMEG00000023737	-	98	86.929	ENSONIG00000011418	ddx61	99	86.929	Oreochromis_niloticus
ENSPMEG00000023737	-	100	93.238	ENSONIG00000013748	-	100	93.238	Oreochromis_niloticus
ENSPMEG00000023737	-	100	91.152	ENSORLG00000009178	-	100	91.152	Oryzias_latipes
ENSPMEG00000023737	-	100	91.564	ENSORLG00020015515	-	100	91.564	Oryzias_latipes_hni
ENSPMEG00000023737	-	100	91.358	ENSORLG00015006764	-	100	91.358	Oryzias_latipes_hsok
ENSPMEG00000023737	-	98	83.579	ENSOMEG00000022326	-	99	83.579	Oryzias_melastigma
ENSPMEG00000023737	-	96	90.063	ENSPKIG00000024264	ddx61	98	89.189	Paramormyrops_kingsleyae
ENSPMEG00000023737	-	100	88.027	ENSPMGG00000013355	-	100	88.027	Periophthalmus_magnuspinnatus
ENSPMEG00000023737	-	100	99.376	ENSPFOG00000005750	-	100	99.376	Poecilia_formosa
ENSPMEG00000023737	-	100	99.376	ENSPLAG00000000403	-	100	99.376	Poecilia_latipinna
ENSPMEG00000023737	-	100	93.033	ENSPNYG00000003986	-	100	93.033	Pundamilia_nyererei
ENSPMEG00000023737	-	98	80.502	ENSPNYG00000015045	ddx61	99	80.502	Pundamilia_nyererei
ENSPMEG00000023737	-	98	87.238	ENSPNAG00000024072	ddx61	99	87.238	Pygocentrus_nattereri
ENSPMEG00000023737	-	98	89.189	ENSPNAG00000008742	-	98	89.189	Pygocentrus_nattereri
ENSPMEG00000023737	-	96	89.831	ENSSFOG00015021404	ddx61	99	87.551	Scleropages_formosus
ENSPMEG00000023737	-	100	90.816	ENSSMAG00000001793	-	100	90.816	Scophthalmus_maximus
ENSPMEG00000023737	-	96	86.966	ENSSMAG00000006591	ddx61	97	86.105	Scophthalmus_maximus
ENSPMEG00000023737	-	100	92.245	ENSSDUG00000007530	-	100	92.245	Seriola_dumerili
ENSPMEG00000023737	-	96	88.889	ENSSDUG00000009713	ddx61	98	87.815	Seriola_dumerili
ENSPMEG00000023737	-	100	92.245	ENSSLDG00000007608	-	100	92.245	Seriola_lalandi_dorsalis
ENSPMEG00000023737	-	96	88.699	ENSSLDG00000000132	ddx61	98	87.631	Seriola_lalandi_dorsalis
ENSPMEG00000023737	-	96	88.248	ENSSPAG00000001578	ddx61	98	87.421	Stegastes_partitus
ENSPMEG00000023737	-	100	93.252	ENSSPAG00000013878	-	100	93.252	Stegastes_partitus
ENSPMEG00000023737	-	99	86.680	ENSTRUG00000012432	-	99	87.195	Takifugu_rubripes
ENSPMEG00000023737	-	98	89.331	ENSTNIG00000003560	-	100	89.331	Tetraodon_nigroviridis
ENSPMEG00000023737	-	100	89.027	ENSXCOG00000001406	-	100	89.027	Xiphophorus_couchianus
ENSPMEG00000023737	-	100	99.172	ENSXMAG00000016090	-	100	99.172	Xiphophorus_maculatus