EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMEG00000023788 (Gene tree)
Gene ID: -
Gene Symbol: trit1 (1 of many)
Alias: -
Full Name: tRNA isopentenyltransferase 1
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Minus strand
Length: 21027 bases
Position: chrKQ552666.1:68302-89328
Accession: ZDB-GENE-060503-297
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000020584	IPPT	PF01715.17	1.2e-46	1	1
ENSPMEP00000020609	IPPT	PF01715.17	8.7e-36	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000030247	-	774	-	ENSPMEP00000020584	257 (aa)	-	-
ENSPMET00000030272	-	627	-	ENSPMEP00000020609	208 (aa)	-	-

Gene Model

Click here to download ENSPMEG00000023788's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000023788's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000023788	trit1	96	62.121	ENSG00000043514	TRIT1	99	61.310	Homo_sapiens
ENSPMEG00000023788	trit1	93	77.308	ENSAPOG00000020918	trit1	56	77.308	Acanthochromis_polyacanthus
ENSPMEG00000023788	trit1	89	65.587	ENSAMEG00000004342	TRIT1	53	65.587	Ailuropoda_melanoleuca
ENSPMEG00000023788	trit1	92	79.757	ENSACIG00000017409	trit1	54	79.435	Amphilophus_citrinellus
ENSPMEG00000023788	trit1	93	77.692	ENSAOCG00000009850	trit1	54	77.692	Amphiprion_ocellaris
ENSPMEG00000023788	trit1	93	77.692	ENSAPEG00000001481	trit1	54	77.692	Amphiprion_percula
ENSPMEG00000023788	trit1	94	77.395	ENSATEG00000005426	trit1	55	77.395	Anabas_testudineus
ENSPMEG00000023788	trit1	94	61.089	ENSACAG00000002280	TRIT1	53	59.480	Anolis_carolinensis
ENSPMEG00000023788	trit1	96	62.121	ENSANAG00000030732	TRIT1	59	62.121	Aotus_nancymaae
ENSPMEG00000023788	trit1	93	76.923	ENSACLG00000004920	trit1	54	76.923	Astatotilapia_calliptera
ENSPMEG00000023788	trit1	98	67.424	ENSAMXG00000010959	trit1	68	67.424	Astyanax_mexicanus
ENSPMEG00000023788	trit1	96	62.500	ENSBTAG00000013832	TRIT1	56	62.500	Bos_taurus
ENSPMEG00000023788	trit1	85	40.909	WBGene00001740	gro-1	56	40.909	Caenorhabditis_elegans
ENSPMEG00000023788	trit1	96	62.500	ENSCJAG00000002620	TRIT1	76	60.662	Callithrix_jacchus
ENSPMEG00000023788	trit1	96	63.019	ENSCAFG00000003048	TRIT1	56	63.019	Canis_familiaris
ENSPMEG00000023788	trit1	96	60.432	ENSCAFG00020003875	TRIT1	76	60.432	Canis_lupus_dingo
ENSPMEG00000023788	trit1	96	61.798	ENSCHIG00000013259	TRIT1	56	61.798	Capra_hircus
ENSPMEG00000023788	trit1	94	62.548	ENSTSYG00000004363	TRIT1	61	60.741	Carlito_syrichta
ENSPMEG00000023788	trit1	94	61.390	ENSCPOG00000012820	TRIT1	55	61.390	Cavia_porcellus
ENSPMEG00000023788	trit1	96	63.320	ENSCCAG00000031271	TRIT1	94	63.529	Cebus_capucinus
ENSPMEG00000023788	trit1	96	61.049	ENSCATG00000034344	TRIT1	75	61.049	Cercocebus_atys
ENSPMEG00000023788	trit1	96	61.742	ENSCLAG00000009828	TRIT1	56	61.742	Chinchilla_lanigera
ENSPMEG00000023788	trit1	77	61.860	ENSCSAG00000001137	TRIT1	52	61.860	Chlorocebus_sabaeus
ENSPMEG00000023788	trit1	94	63.320	ENSCHOG00000000435	TRIT1	56	62.879	Choloepus_hoffmanni
ENSPMEG00000023788	trit1	88	48.361	ENSCSAVG00000002050	-	54	48.361	Ciona_savignyi
ENSPMEG00000023788	trit1	96	61.742	ENSCANG00000043008	TRIT1	75	60.674	Colobus_angolensis_palliatus
ENSPMEG00000023788	trit1	96	63.258	ENSCGRG00001001894	Trit1	56	63.258	Cricetulus_griseus_chok1gshd
ENSPMEG00000023788	trit1	98	71.326	ENSCSEG00000009574	trit1	59	71.326	Cynoglossus_semilaevis
ENSPMEG00000023788	trit1	75	84.242	ENSCVAG00000000422	trit1	97	84.118	Cyprinodon_variegatus
ENSPMEG00000023788	trit1	93	68.605	ENSDARG00000032876	trit1	78	68.605	Danio_rerio
ENSPMEG00000023788	trit1	94	61.423	ENSDNOG00000001994	TRIT1	51	61.029	Dasypus_novemcinctus
ENSPMEG00000023788	trit1	96	54.475	ENSDORG00000012449	Trit1	56	54.475	Dipodomys_ordii
ENSPMEG00000023788	trit1	89	46.964	FBgn0043799	CG31381	52	46.964	Drosophila_melanogaster
ENSPMEG00000023788	trit1	96	60.662	ENSETEG00000008733	TRIT1	64	60.662	Echinops_telfairi
ENSPMEG00000023788	trit1	91	56.250	ENSEBUG00000012845	trit1	61	56.250	Eptatretus_burgeri
ENSPMEG00000023788	trit1	89	61.961	ENSECAG00000010597	TRIT1	54	58.214	Equus_caballus
ENSPMEG00000023788	trit1	94	53.160	ENSEEUG00000009269	TRIT1	56	53.160	Erinaceus_europaeus
ENSPMEG00000023788	trit1	96	67.286	ENSELUG00000017278	trit1	60	67.286	Esox_lucius
ENSPMEG00000023788	trit1	94	63.320	ENSFCAG00000006029	TRIT1	59	62.500	Felis_catus
ENSPMEG00000023788	trit1	77	59.777	ENSFALG00000000532	TRIT1	54	61.111	Ficedula_albicollis
ENSPMEG00000023788	trit1	96	59.058	ENSFDAG00000003098	TRIT1	61	59.058	Fukomys_damarensis
ENSPMEG00000023788	trit1	93	70.635	ENSFHEG00000022274	trit1	76	73.413	Fundulus_heteroclitus
ENSPMEG00000023788	trit1	93	68.561	ENSGMOG00000006522	trit1	61	69.697	Gadus_morhua
ENSPMEG00000023788	trit1	96	60.985	ENSGALG00000003851	TRIT1	58	61.364	Gallus_gallus
ENSPMEG00000023788	trit1	93	97.059	ENSGAFG00000018636	trit1	96	98.726	Gambusia_affinis
ENSPMEG00000023788	trit1	93	71.970	ENSGACG00000008493	trit1	61	73.106	Gasterosteus_aculeatus
ENSPMEG00000023788	trit1	78	59.444	ENSGAGG00000000522	TRIT1	53	61.574	Gopherus_agassizii
ENSPMEG00000023788	trit1	96	62.121	ENSGGOG00000010070	TRIT1	75	61.049	Gorilla_gorilla
ENSPMEG00000023788	trit1	93	76.538	ENSHBUG00000018999	trit1	54	76.538	Haplochromis_burtoni
ENSPMEG00000023788	trit1	96	61.742	ENSHGLG00000010308	-	57	61.742	Heterocephalus_glaber_female
ENSPMEG00000023788	trit1	95	57.480	ENSHGLG00000009564	-	57	57.647	Heterocephalus_glaber_female
ENSPMEG00000023788	trit1	96	61.742	ENSHGLG00100015382	-	57	61.742	Heterocephalus_glaber_male
ENSPMEG00000023788	trit1	93	76.154	ENSHCOG00000006755	trit1	53	76.154	Hippocampus_comes
ENSPMEG00000023788	trit1	93	68.605	ENSIPUG00000021822	trit1	57	68.605	Ictalurus_punctatus
ENSPMEG00000023788	trit1	96	61.364	ENSSTOG00000006446	TRIT1	55	61.364	Ictidomys_tridecemlineatus
ENSPMEG00000023788	trit1	96	52.256	ENSJJAG00000000300	-	56	54.511	Jaculus_jaculus
ENSPMEG00000023788	trit1	93	61.961	ENSJJAG00000000316	-	58	61.961	Jaculus_jaculus
ENSPMEG00000023788	trit1	93	76.448	ENSKMAG00000021788	trit1	54	76.448	Kryptolebias_marmoratus
ENSPMEG00000023788	trit1	93	76.628	ENSLBEG00000024262	trit1	54	76.628	Labrus_bergylta
ENSPMEG00000023788	trit1	93	61.624	ENSLACG00000013861	TRIT1	56	62.362	Latimeria_chalumnae
ENSPMEG00000023788	trit1	93	66.160	ENSLOCG00000002057	trit1	55	66.160	Lepisosteus_oculatus
ENSPMEG00000023788	trit1	96	60.606	ENSLAFG00000016876	TRIT1	56	60.606	Loxodonta_africana
ENSPMEG00000023788	trit1	96	62.121	ENSMFAG00000001316	TRIT1	75	61.049	Macaca_fascicularis
ENSPMEG00000023788	trit1	96	62.121	ENSMMUG00000016220	TRIT1	75	61.049	Macaca_mulatta
ENSPMEG00000023788	trit1	96	62.121	ENSMNEG00000023137	TRIT1	75	61.049	Macaca_nemestrina
ENSPMEG00000023788	trit1	96	62.121	ENSMLEG00000035296	TRIT1	75	61.049	Mandrillus_leucophaeus
ENSPMEG00000023788	trit1	93	76.245	ENSMAMG00000005868	trit1	69	76.245	Mastacembelus_armatus
ENSPMEG00000023788	trit1	93	76.538	ENSMZEG00005011506	trit1	54	76.538	Maylandia_zebra
ENSPMEG00000023788	trit1	77	59.447	ENSMGAG00000005516	TRIT1	58	62.212	Meleagris_gallopavo
ENSPMEG00000023788	trit1	96	62.500	ENSMAUG00000000399	Trit1	56	62.500	Mesocricetus_auratus
ENSPMEG00000023788	trit1	94	61.776	ENSMICG00000016294	TRIT1	59	61.364	Microcebus_murinus
ENSPMEG00000023788	trit1	96	62.121	ENSMOCG00000008173	Trit1	56	62.121	Microtus_ochrogaster
ENSPMEG00000023788	trit1	77	73.611	ENSMMOG00000021140	trit1	51	73.611	Mola_mola
ENSPMEG00000023788	trit1	89	62.846	ENSMODG00000017650	TRIT1	55	62.846	Monodelphis_domestica
ENSPMEG00000023788	trit1	93	74.713	ENSMALG00000017843	trit1	55	74.713	Monopterus_albus
ENSPMEG00000023788	trit1	96	63.258	MGP_CAROLIEiJ_G0026428	Trit1	56	63.258	Mus_caroli
ENSPMEG00000023788	trit1	96	63.258	ENSMUSG00000028653	Trit1	56	63.258	Mus_musculus
ENSPMEG00000023788	trit1	96	62.879	MGP_PahariEiJ_G0028758	Trit1	56	62.879	Mus_pahari
ENSPMEG00000023788	trit1	96	62.879	MGP_SPRETEiJ_G0027408	Trit1	56	62.879	Mus_spretus
ENSPMEG00000023788	trit1	96	62.642	ENSMPUG00000014291	TRIT1	56	62.642	Mustela_putorius_furo
ENSPMEG00000023788	trit1	96	60.227	ENSMLUG00000000334	TRIT1	56	60.227	Myotis_lucifugus
ENSPMEG00000023788	trit1	79	74.302	ENSNBRG00000020509	trit1	98	77.143	Neolamprologus_brichardi
ENSPMEG00000023788	trit1	96	62.121	ENSNLEG00000012038	TRIT1	75	61.049	Nomascus_leucogenys
ENSPMEG00000023788	trit1	90	54.032	ENSMEUG00000005217	TRIT1	53	54.032	Notamacropus_eugenii
ENSPMEG00000023788	trit1	96	61.194	ENSODEG00000006117	TRIT1	57	61.194	Octodon_degus
ENSPMEG00000023788	trit1	93	75.472	ENSONIG00000015407	trit1	55	75.472	Oreochromis_niloticus
ENSPMEG00000023788	trit1	77	63.256	ENSOANG00000002779	TRIT1	55	63.256	Ornithorhynchus_anatinus
ENSPMEG00000023788	trit1	94	63.320	ENSOCUG00000002054	TRIT1	56	62.879	Oryctolagus_cuniculus
ENSPMEG00000023788	trit1	93	75.290	ENSORLG00000005802	trit1	56	75.290	Oryzias_latipes
ENSPMEG00000023788	trit1	93	75.676	ENSORLG00020005519	trit1	56	75.676	Oryzias_latipes_hni
ENSPMEG00000023788	trit1	93	75.290	ENSORLG00015018715	trit1	56	75.290	Oryzias_latipes_hsok
ENSPMEG00000023788	trit1	96	72.348	ENSOMEG00000006569	trit1	57	73.485	Oryzias_melastigma
ENSPMEG00000023788	trit1	94	61.538	ENSOGAG00000009571	TRIT1	56	61.132	Otolemur_garnettii
ENSPMEG00000023788	trit1	96	62.264	ENSOARG00000020140	TRIT1	56	62.264	Ovis_aries
ENSPMEG00000023788	trit1	96	62.121	ENSPPAG00000023930	TRIT1	75	61.049	Pan_paniscus
ENSPMEG00000023788	trit1	95	63.462	ENSPPRG00000009680	TRIT1	60	62.642	Panthera_pardus
ENSPMEG00000023788	trit1	95	63.462	ENSPTIG00000021134	TRIT1	60	62.642	Panthera_tigris_altaica
ENSPMEG00000023788	trit1	96	62.121	ENSPTRG00000000579	TRIT1	75	61.049	Pan_troglodytes
ENSPMEG00000023788	trit1	96	62.121	ENSPANG00000018125	TRIT1	75	61.049	Papio_anubis
ENSPMEG00000023788	trit1	75	74.847	ENSPKIG00000024527	trit1	54	73.399	Paramormyrops_kingsleyae
ENSPMEG00000023788	trit1	77	44.000	ENSPSIG00000017073	TRIT1	53	44.000	Pelodiscus_sinensis
ENSPMEG00000023788	trit1	77	75.701	ENSPMGG00000018445	trit1	52	75.701	Periophthalmus_magnuspinnatus
ENSPMEG00000023788	trit1	96	61.887	ENSPEMG00000022418	Trit1	56	61.887	Peromyscus_maniculatus_bairdii
ENSPMEG00000023788	trit1	75	58.333	ENSPMAG00000008892	trit1	57	55.752	Petromyzon_marinus
ENSPMEG00000023788	trit1	89	64.567	ENSPCIG00000020666	TRIT1	73	64.567	Phascolarctos_cinereus
ENSPMEG00000023788	trit1	93	91.120	ENSPFOG00000014626	trit1	55	91.120	Poecilia_formosa
ENSPMEG00000023788	trit1	100	97.596	ENSPLAG00000011669	trit1	100	97.596	Poecilia_latipinna
ENSPMEG00000023788	trit1	93	97.083	ENSPREG00000018182	trit1	71	97.083	Poecilia_reticulata
ENSPMEG00000023788	trit1	96	62.879	ENSPPYG00000001499	TRIT1	56	62.879	Pongo_abelii
ENSPMEG00000023788	trit1	95	61.450	ENSPCOG00000014150	TRIT1	59	60.985	Propithecus_coquereli
ENSPMEG00000023788	trit1	89	52.632	ENSPVAG00000003344	TRIT1	53	52.632	Pteropus_vampyrus
ENSPMEG00000023788	trit1	93	76.448	ENSPNYG00000001003	trit1	84	76.448	Pundamilia_nyererei
ENSPMEG00000023788	trit1	99	64.419	ENSPNAG00000009466	trit1	68	64.419	Pygocentrus_nattereri
ENSPMEG00000023788	trit1	96	59.712	ENSRNOG00000014274	Trit1	57	59.712	Rattus_norvegicus
ENSPMEG00000023788	trit1	96	61.742	ENSRBIG00000043179	TRIT1	75	60.674	Rhinopithecus_bieti
ENSPMEG00000023788	trit1	96	61.742	ENSRROG00000042670	TRIT1	75	60.674	Rhinopithecus_roxellana
ENSPMEG00000023788	trit1	90	38.115	YOR274W	-	55	38.115	Saccharomyces_cerevisiae
ENSPMEG00000023788	trit1	96	62.121	ENSSBOG00000024417	TRIT1	75	61.509	Saimiri_boliviensis_boliviensis
ENSPMEG00000023788	trit1	80	59.471	ENSSHAG00000018363	TRIT1	54	59.471	Sarcophilus_harrisii
ENSPMEG00000023788	trit1	98	68.401	ENSSFOG00015007284	trit1	56	68.401	Scleropages_formosus
ENSPMEG00000023788	trit1	93	76.923	ENSSMAG00000020730	trit1	55	76.923	Scophthalmus_maximus
ENSPMEG00000023788	trit1	93	79.231	ENSSDUG00000001683	trit1	54	79.231	Seriola_dumerili
ENSPMEG00000023788	trit1	93	78.462	ENSSLDG00000008379	trit1	54	78.462	Seriola_lalandi_dorsalis
ENSPMEG00000023788	trit1	92	61.217	ENSSARG00000004540	TRIT1	56	61.217	Sorex_araneus
ENSPMEG00000023788	trit1	93	79.447	ENSSPAG00000020745	trit1	57	79.447	Stegastes_partitus
ENSPMEG00000023788	trit1	77	57.339	ENSTGUG00000001242	TRIT1	58	57.339	Taeniopygia_guttata
ENSPMEG00000023788	trit1	93	80.080	ENSTRUG00000013936	trit1	57	80.080	Takifugu_rubripes
ENSPMEG00000023788	trit1	97	74.632	ENSTNIG00000009240	trit1	57	76.923	Tetraodon_nigroviridis
ENSPMEG00000023788	trit1	94	62.162	ENSTTRG00000005064	TRIT1	55	62.162	Tursiops_truncatus
ENSPMEG00000023788	trit1	90	66.805	ENSUAMG00000000522	-	89	75.000	Ursus_americanus
ENSPMEG00000023788	trit1	96	55.682	ENSVPAG00000003008	TRIT1	56	55.682	Vicugna_pacos
ENSPMEG00000023788	trit1	90	62.550	ENSXETG00000010952	trit1	56	62.550	Xenopus_tropicalis
ENSPMEG00000023788	trit1	93	94.672	ENSXMAG00000016302	trit1	70	94.672	Xiphophorus_maculatus