EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMEG00000024032 (Gene tree)
Gene ID: 106925138
Gene Symbol: gpatch8
Alias: -
Full Name: G-patch domain containing 8
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Minus strand
Length: 26460 bases
Position: chrKQ551734.1:169024-195483
Accession: 106925138
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000020803	zf-C2H2_jaz	PF12171.8	5.4e-06	1	1
ENSPMEP00000020809	zf-C2H2_jaz	PF12171.8	5.6e-06	1	1
ENSPMEP00000020809	G-patch	PF01585.23	1e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000035232	-	7404	-	ENSPMEP00000020803	1423 (aa)	-	-
ENSPMET00000030516	-	7789	XM_014999250	ENSPMEP00000020809	1486 (aa)	XP_014854736	UPI00072EC03F

Gene Model

Click here to download ENSPMEG00000024032's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000024032's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000024032	gpatch8	100	84.358	ENSAPOG00000023938	gpatch8	100	84.559	Acanthochromis_polyacanthus
ENSPMEG00000024032	gpatch8	100	82.533	ENSACIG00000012241	gpatch8	100	82.933	Amphilophus_citrinellus
ENSPMEG00000024032	gpatch8	100	84.225	ENSAOCG00000018102	gpatch8	100	84.358	Amphiprion_ocellaris
ENSPMEG00000024032	gpatch8	100	84.158	ENSAPEG00000016776	gpatch8	100	84.291	Amphiprion_percula
ENSPMEG00000024032	gpatch8	100	82.553	ENSACLG00000004165	gpatch8	100	82.620	Astatotilapia_calliptera
ENSPMEG00000024032	gpatch8	100	77.985	ENSCSEG00000021277	gpatch8	100	78.185	Cynoglossus_semilaevis
ENSPMEG00000024032	gpatch8	100	88.503	ENSCVAG00000013477	gpatch8	100	88.636	Cyprinodon_variegatus
ENSPMEG00000024032	gpatch8	100	64.081	ENSDARG00000059768	gpatch8	55	60.142	Danio_rerio
ENSPMEG00000024032	gpatch8	59	49.474	ENSEBUG00000005749	gpatch8	54	48.322	Eptatretus_burgeri
ENSPMEG00000024032	gpatch8	61	63.420	ENSELUG00000019920	gpatch8	56	63.073	Esox_lucius
ENSPMEG00000024032	gpatch8	100	96.371	ENSGAFG00000018138	gpatch8	100	96.371	Gambusia_affinis
ENSPMEG00000024032	gpatch8	100	82.055	ENSHBUG00000002669	gpatch8	100	82.388	Haplochromis_burtoni
ENSPMEG00000024032	gpatch8	74	56.322	ENSHGLG00100010738	GPATCH8	64	61.983	Heterocephalus_glaber_male
ENSPMEG00000024032	gpatch8	100	72.600	ENSHCOG00000017518	gpatch8	96	70.842	Hippocampus_comes
ENSPMEG00000024032	gpatch8	59	58.894	ENSIPUG00000015431	gpatch8	55	60.395	Ictalurus_punctatus
ENSPMEG00000024032	gpatch8	100	83.589	ENSKMAG00000018364	gpatch8	55	80.820	Kryptolebias_marmoratus
ENSPMEG00000024032	gpatch8	100	79.867	ENSLBEG00000023352	gpatch8	100	79.867	Labrus_bergylta
ENSPMEG00000024032	gpatch8	61	81.897	ENSLOCG00000012265	gpatch8	75	76.596	Lepisosteus_oculatus
ENSPMEG00000024032	gpatch8	100	81.568	ENSMAMG00000001618	gpatch8	100	81.876	Mastacembelus_armatus
ENSPMEG00000024032	gpatch8	100	82.152	ENSMZEG00005022584	gpatch8	100	82.553	Maylandia_zebra
ENSPMEG00000024032	gpatch8	61	76.856	ENSMMOG00000020472	gpatch8	55	74.699	Mola_mola
ENSPMEG00000024032	gpatch8	100	79.693	ENSMALG00000004204	gpatch8	55	74.789	Monopterus_albus
ENSPMEG00000024032	gpatch8	50	63.006	ENSMLUG00000013840	GPATCH8	52	63.905	Myotis_lucifugus
ENSPMEG00000024032	gpatch8	100	82.255	ENSNBRG00000016402	gpatch8	100	82.588	Neolamprologus_brichardi
ENSPMEG00000024032	gpatch8	100	79.732	ENSONIG00000001292	gpatch8	100	81.449	Oreochromis_niloticus
ENSPMEG00000024032	gpatch8	61	76.848	ENSORLG00000028497	gpatch8	56	75.060	Oryzias_latipes
ENSPMEG00000024032	gpatch8	61	76.087	ENSORLG00020006656	gpatch8	56	74.341	Oryzias_latipes_hni
ENSPMEG00000024032	gpatch8	61	76.630	ENSORLG00015019797	gpatch8	56	74.820	Oryzias_latipes_hsok
ENSPMEG00000024032	gpatch8	61	52.828	ENSPKIG00000018753	gpatch8	56	54.577	Paramormyrops_kingsleyae
ENSPMEG00000024032	gpatch8	100	99.228	ENSPFOG00000014833	gpatch8	100	99.194	Poecilia_formosa
ENSPMEG00000024032	gpatch8	100	98.667	ENSPLAG00000001035	gpatch8	100	98.656	Poecilia_latipinna
ENSPMEG00000024032	gpatch8	100	97.110	ENSPREG00000008911	gpatch8	100	97.110	Poecilia_reticulata
ENSPMEG00000024032	gpatch8	100	82.353	ENSPNYG00000009426	gpatch8	100	82.754	Pundamilia_nyererei
ENSPMEG00000024032	gpatch8	59	60.818	ENSPNAG00000016200	gpatch8	58	61.670	Pygocentrus_nattereri
ENSPMEG00000024032	gpatch8	89	64.394	ENSSFOG00015004299	GPATCH8	89	64.394	Scleropages_formosus
ENSPMEG00000024032	gpatch8	55	55.279	ENSSFOG00015021377	-	55	55.344	Scleropages_formosus
ENSPMEG00000024032	gpatch8	100	82.897	ENSSDUG00000018065	gpatch8	100	82.414	Seriola_dumerili
ENSPMEG00000024032	gpatch8	100	84.109	ENSSLDG00000009225	gpatch8	100	83.777	Seriola_lalandi_dorsalis
ENSPMEG00000024032	gpatch8	100	84.091	ENSSPAG00000011368	gpatch8	100	83.957	Stegastes_partitus
ENSPMEG00000024032	gpatch8	100	76.203	ENSTRUG00000020474	gpatch8	100	75.802	Takifugu_rubripes
ENSPMEG00000024032	gpatch8	58	62.362	ENSTBEG00000009486	GPATCH8	54	61.993	Tupaia_belangeri
ENSPMEG00000024032	gpatch8	100	96.450	ENSXCOG00000016680	gpatch8	100	96.450	Xiphophorus_couchianus
ENSPMEG00000024032	gpatch8	100	96.647	ENSXMAG00000009217	gpatch8	100	96.647	Xiphophorus_maculatus