EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMEG00000024145 (Gene tree)
Gene ID: 106904756
Gene Symbol: mbd1b
Alias: -
Full Name: uncharacterized LOC106904756
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Minus strand
Length: 16133 bases
Position: chrKQ552994.1:54865-70997
Accession: 106904756
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000034742	MBD	PF01429.19	3.2e-13	1	1
ENSPMEP00000034745	MBD	PF01429.19	3.4e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000035296	-	5442	XM_014969217	ENSPMEP00000034745	791 (aa)	XP_014824703	UPI00072E3632
ENSPMET00000030637	-	5352	-	ENSPMEP00000034742	761 (aa)	-	-

Gene Model

Click here to download ENSPMEG00000024145's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000024145's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000024145	mbd1b	50	32.338	ENSG00000141644	MBD1	75	54.545	Homo_sapiens
ENSPMEG00000024145	mbd1b	99	64.536	ENSAPOG00000012810	mbd1b	100	63.057	Acanthochromis_polyacanthus
ENSPMEG00000024145	mbd1b	52	51.546	ENSAMEG00000000238	MBD1	53	53.261	Ailuropoda_melanoleuca
ENSPMEG00000024145	mbd1b	91	73.026	ENSACIG00000010590	mbd1b	74	73.026	Amphilophus_citrinellus
ENSPMEG00000024145	mbd1b	99	65.659	ENSAOCG00000020272	mbd1b	100	63.932	Amphiprion_ocellaris
ENSPMEG00000024145	mbd1b	99	65.580	ENSAPEG00000023230	mbd1b	100	63.976	Amphiprion_percula
ENSPMEG00000024145	mbd1b	97	62.241	ENSATEG00000009608	mbd1b	92	63.648	Anabas_testudineus
ENSPMEG00000024145	mbd1b	50	37.640	ENSANAG00000036253	MBD1	63	53.846	Aotus_nancymaae
ENSPMEG00000024145	mbd1b	99	62.303	ENSACLG00000021383	mbd1b	89	64.619	Astatotilapia_calliptera
ENSPMEG00000024145	mbd1b	50	58.333	ENSBTAG00000003801	MBD1	71	53.846	Bos_taurus
ENSPMEG00000024145	mbd1b	50	37.079	ENSCJAG00000004959	MBD1	64	53.846	Callithrix_jacchus
ENSPMEG00000024145	mbd1b	50	56.667	ENSCHIG00000021134	MBD1	57	53.846	Capra_hircus
ENSPMEG00000024145	mbd1b	51	32.701	ENSCPOG00000001671	MBD1	67	32.941	Cavia_porcellus
ENSPMEG00000024145	mbd1b	51	52.174	ENSCATG00000029959	MBD1	62	53.846	Cercocebus_atys
ENSPMEG00000024145	mbd1b	50	32.338	ENSCANG00000033425	MBD1	57	53.846	Colobus_angolensis_palliatus
ENSPMEG00000024145	mbd1b	51	36.683	ENSCGRG00001014843	Mbd1	58	55.435	Cricetulus_griseus_chok1gshd
ENSPMEG00000024145	mbd1b	90	55.626	ENSCSEG00000009082	mbd1b	94	55.696	Cynoglossus_semilaevis
ENSPMEG00000024145	mbd1b	99	76.121	ENSCVAG00000001167	mbd1b	100	75.937	Cyprinodon_variegatus
ENSPMEG00000024145	mbd1b	91	36.978	ENSDARG00000025699	mbd1b	88	36.092	Danio_rerio
ENSPMEG00000024145	mbd1b	51	53.261	ENSEASG00005003857	MBD1	55	53.846	Equus_asinus_asinus
ENSPMEG00000024145	mbd1b	92	45.658	ENSELUG00000004375	mbd1b	71	60.870	Esox_lucius
ENSPMEG00000024145	mbd1b	52	51.546	ENSFCAG00000015730	MBD1	61	53.846	Felis_catus
ENSPMEG00000024145	mbd1b	100	76.634	ENSFHEG00000020120	mbd1b	100	76.271	Fundulus_heteroclitus
ENSPMEG00000024145	mbd1b	100	95.975	ENSGAFG00000008975	mbd1b	100	95.975	Gambusia_affinis
ENSPMEG00000024145	mbd1b	78	76.712	ENSGACG00000012106	-	100	76.712	Gasterosteus_aculeatus
ENSPMEG00000024145	mbd1b	50	32.338	ENSGGOG00000016966	MBD1	57	53.846	Gorilla_gorilla
ENSPMEG00000024145	mbd1b	99	62.303	ENSHBUG00000014270	mbd1b	89	64.887	Haplochromis_burtoni
ENSPMEG00000024145	mbd1b	91	55.214	ENSHCOG00000009952	mbd1b	92	54.707	Hippocampus_comes
ENSPMEG00000024145	mbd1b	91	36.750	ENSIPUG00000015243	-	90	37.787	Ictalurus_punctatus
ENSPMEG00000024145	mbd1b	99	69.900	ENSKMAG00000020760	mbd1b	100	70.237	Kryptolebias_marmoratus
ENSPMEG00000024145	mbd1b	51	51.064	ENSLAFG00000031328	MBD1	67	34.848	Loxodonta_africana
ENSPMEG00000024145	mbd1b	51	52.174	ENSMLEG00000043121	MBD1	57	53.846	Mandrillus_leucophaeus
ENSPMEG00000024145	mbd1b	69	65.753	ENSMAMG00000023341	-	82	66.165	Mastacembelus_armatus
ENSPMEG00000024145	mbd1b	99	62.500	ENSMZEG00005010421	mbd1b	89	64.753	Maylandia_zebra
ENSPMEG00000024145	mbd1b	99	59.314	ENSMMOG00000011607	mbd1b	88	87.179	Mola_mola
ENSPMEG00000024145	mbd1b	97	62.940	ENSMALG00000007808	mbd1b	95	62.500	Monopterus_albus
ENSPMEG00000024145	mbd1b	50	30.435	ENSMLUG00000008286	MBD1	53	57.143	Myotis_lucifugus
ENSPMEG00000024145	mbd1b	50	31.190	ENSOPRG00000007647	MBD1	67	30.404	Ochotona_princeps
ENSPMEG00000024145	mbd1b	99	62.954	ENSONIG00000020289	mbd1b	98	61.548	Oreochromis_niloticus
ENSPMEG00000024145	mbd1b	99	62.440	ENSORLG00000029390	mbd1b	99	61.979	Oryzias_latipes
ENSPMEG00000024145	mbd1b	99	62.560	ENSORLG00020000575	mbd1b	99	61.979	Oryzias_latipes_hni
ENSPMEG00000024145	mbd1b	99	62.724	ENSORLG00015014812	mbd1b	99	62.143	Oryzias_latipes_hsok
ENSPMEG00000024145	mbd1b	99	60.093	ENSOMEG00000023660	mbd1b	100	59.767	Oryzias_melastigma
ENSPMEG00000024145	mbd1b	50	32.338	ENSPPAG00000038886	MBD1	62	53.846	Pan_paniscus
ENSPMEG00000024145	mbd1b	52	51.546	ENSPPRG00000021387	MBD1	61	53.846	Panthera_pardus
ENSPMEG00000024145	mbd1b	52	51.546	ENSPTIG00000021231	MBD1	61	53.846	Panthera_tigris_altaica
ENSPMEG00000024145	mbd1b	50	32.338	ENSPTRG00000010021	MBD1	62	53.846	Pan_troglodytes
ENSPMEG00000024145	mbd1b	51	52.174	ENSPANG00000010867	MBD1	57	53.846	Papio_anubis
ENSPMEG00000024145	mbd1b	73	38.462	ENSPCIG00000027937	-	73	38.462	Phascolarctos_cinereus
ENSPMEG00000024145	mbd1b	100	99.370	ENSPFOG00000007511	mbd1b	100	99.370	Poecilia_formosa
ENSPMEG00000024145	mbd1b	100	98.990	ENSPLAG00000021258	mbd1b	100	98.990	Poecilia_latipinna
ENSPMEG00000024145	mbd1b	100	97.980	ENSPREG00000021805	mbd1b	100	97.980	Poecilia_reticulata
ENSPMEG00000024145	mbd1b	51	35.204	ENSPCOG00000012450	MBD1	65	52.174	Propithecus_coquereli
ENSPMEG00000024145	mbd1b	91	38.269	ENSPNAG00000018075	mbd1b	81	46.486	Pygocentrus_nattereri
ENSPMEG00000024145	mbd1b	50	32.587	ENSRBIG00000041294	MBD1	54	53.846	Rhinopithecus_bieti
ENSPMEG00000024145	mbd1b	50	32.587	ENSRROG00000032517	MBD1	61	53.846	Rhinopithecus_roxellana
ENSPMEG00000024145	mbd1b	50	36.517	ENSSBOG00000027169	MBD1	57	52.308	Saimiri_boliviensis_boliviensis
ENSPMEG00000024145	mbd1b	76	46.635	ENSSFOG00015008591	-	62	50.485	Scleropages_formosus
ENSPMEG00000024145	mbd1b	94	62.438	ENSSMAG00000014640	mbd1b	82	62.939	Scophthalmus_maximus
ENSPMEG00000024145	mbd1b	90	66.230	ENSSDUG00000012996	mbd1b	86	65.223	Seriola_dumerili
ENSPMEG00000024145	mbd1b	73	65.333	ENSSLDG00000012422	mbd1b	82	65.942	Seriola_lalandi_dorsalis
ENSPMEG00000024145	mbd1b	100	65.584	ENSSPAG00000021447	mbd1b	99	64.501	Stegastes_partitus
ENSPMEG00000024145	mbd1b	50	31.553	ENSSSCG00000004516	MBD1	72	33.500	Sus_scrofa
ENSPMEG00000024145	mbd1b	97	60.227	ENSTRUG00000013422	mbd1b	91	59.651	Takifugu_rubripes
ENSPMEG00000024145	mbd1b	61	59.542	ENSTNIG00000007326	-	73	59.690	Tetraodon_nigroviridis
ENSPMEG00000024145	mbd1b	54	30.805	ENSUAMG00000004752	MBD1	67	32.187	Ursus_americanus
ENSPMEG00000024145	mbd1b	51	53.261	ENSUMAG00000002947	MBD1	54	53.261	Ursus_maritimus
ENSPMEG00000024145	mbd1b	100	96.000	ENSXMAG00000005628	mbd1b	100	96.000	Xiphophorus_maculatus