EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPMEG00000024198 (Gene tree)
Gene ID: 106906967
Gene Symbol: si:ch211-11k18.4
Alias: -
Full Name: uncharacterized LOC106906967
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Minus strand
Length: 13597 bases
Position: chrKQ551060.1:535028-548624
Accession: 106906967
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000034807	MMR_HSR1	PF01926.23	3.8e-06	1	1
ENSPMEP00000034815	MMR_HSR1	PF01926.23	3.9e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000035318	-	3018	XM_014972455	ENSPMEP00000034815	451 (aa)	XP_014827941	UPI00072EEF20
ENSPMET00000030682	-	3093	-	ENSPMEP00000034807	434 (aa)	-	-

Gene Model

Click here to download ENSPMEG00000024198's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000024198's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPMEG00000024198	si:ch211-11k18.4	99	61.894	ENSPMEG00000018709	si:dkey-98f17.5	94	61.111

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000024198	si:ch211-11k18.4	100	89.135	ENSAPOG00000018833	si:ch211-11k18.4	100	89.135	Acanthochromis_polyacanthus
ENSPMEG00000024198	si:ch211-11k18.4	99	62.673	ENSAPOG00000010378	si:dkey-98f17.5	100	61.778	Acanthochromis_polyacanthus
ENSPMEG00000024198	si:ch211-11k18.4	99	86.000	ENSACIG00000006696	si:ch211-11k18.4	99	86.000	Amphilophus_citrinellus
ENSPMEG00000024198	si:ch211-11k18.4	99	61.663	ENSACIG00000017719	si:dkey-98f17.5	100	60.889	Amphilophus_citrinellus
ENSPMEG00000024198	si:ch211-11k18.4	100	89.800	ENSAOCG00000014284	si:ch211-11k18.4	100	89.800	Amphiprion_ocellaris
ENSPMEG00000024198	si:ch211-11k18.4	99	62.818	ENSAOCG00000008661	si:dkey-98f17.5	100	62.000	Amphiprion_ocellaris
ENSPMEG00000024198	si:ch211-11k18.4	100	89.579	ENSAPEG00000014910	si:ch211-11k18.4	100	89.579	Amphiprion_percula
ENSPMEG00000024198	si:ch211-11k18.4	99	62.818	ENSAPEG00000022447	si:dkey-98f17.5	100	62.000	Amphiprion_percula
ENSPMEG00000024198	si:ch211-11k18.4	100	87.805	ENSATEG00000004775	si:ch211-11k18.4	100	87.805	Anabas_testudineus
ENSPMEG00000024198	si:ch211-11k18.4	99	62.587	ENSATEG00000007188	si:dkey-98f17.5	100	61.778	Anabas_testudineus
ENSPMEG00000024198	si:ch211-11k18.4	98	64.953	ENSACAG00000028632	-	98	64.574	Anolis_carolinensis
ENSPMEG00000024198	si:ch211-11k18.4	99	62.125	ENSACLG00000001308	si:dkey-98f17.5	100	61.333	Astatotilapia_calliptera
ENSPMEG00000024198	si:ch211-11k18.4	100	87.583	ENSACLG00000007907	si:ch211-11k18.4	100	87.583	Astatotilapia_calliptera
ENSPMEG00000024198	si:ch211-11k18.4	99	82.407	ENSAMXG00000017817	si:ch211-11k18.4	100	82.222	Astyanax_mexicanus
ENSPMEG00000024198	si:ch211-11k18.4	99	61.432	ENSAMXG00000001190	si:dkey-98f17.5	100	60.889	Astyanax_mexicanus
ENSPMEG00000024198	si:ch211-11k18.4	87	61.008	ENSCING00000020807	-	99	61.008	Ciona_intestinalis
ENSPMEG00000024198	si:ch211-11k18.4	100	59.862	ENSCSAVG00000009987	-	100	60.089	Ciona_savignyi
ENSPMEG00000024198	si:ch211-11k18.4	100	83.814	ENSCSEG00000017661	si:ch211-11k18.4	100	83.814	Cynoglossus_semilaevis
ENSPMEG00000024198	si:ch211-11k18.4	99	61.894	ENSCSEG00000017512	si:dkey-98f17.5	98	61.557	Cynoglossus_semilaevis
ENSPMEG00000024198	si:ch211-11k18.4	99	61.663	ENSCVAG00000011351	si:dkey-98f17.5	100	60.889	Cyprinodon_variegatus
ENSPMEG00000024198	si:ch211-11k18.4	100	92.396	ENSCVAG00000015346	si:ch211-11k18.4	100	92.239	Cyprinodon_variegatus
ENSPMEG00000024198	si:ch211-11k18.4	99	82.176	ENSDARG00000087869	si:ch211-11k18.4	100	89.796	Danio_rerio
ENSPMEG00000024198	si:ch211-11k18.4	99	60.970	ENSDARG00000068863	si:dkey-98f17.5	100	61.224	Danio_rerio
ENSPMEG00000024198	si:ch211-11k18.4	82	60.000	ENSEBUG00000007620	si:dkey-98f17.5	89	62.462	Eptatretus_burgeri
ENSPMEG00000024198	si:ch211-11k18.4	99	60.230	ENSELUG00000003365	si:dkey-98f17.5	100	59.867	Esox_lucius
ENSPMEG00000024198	si:ch211-11k18.4	99	61.663	ENSFHEG00000012744	si:dkey-98f17.5	100	60.889	Fundulus_heteroclitus
ENSPMEG00000024198	si:ch211-11k18.4	100	89.357	ENSFHEG00000019820	si:ch211-11k18.4	100	89.357	Fundulus_heteroclitus
ENSPMEG00000024198	si:ch211-11k18.4	93	77.970	ENSGMOG00000003492	si:ch211-11k18.4	100	77.970	Gadus_morhua
ENSPMEG00000024198	si:ch211-11k18.4	99	61.432	ENSGAFG00000012362	si:dkey-98f17.5	89	60.667	Gambusia_affinis
ENSPMEG00000024198	si:ch211-11k18.4	100	94.457	ENSGAFG00000005677	si:ch211-11k18.4	100	94.457	Gambusia_affinis
ENSPMEG00000024198	si:ch211-11k18.4	93	87.129	ENSGACG00000013134	si:ch211-11k18.4	100	87.129	Gasterosteus_aculeatus
ENSPMEG00000024198	si:ch211-11k18.4	60	74.231	ENSGACG00000009399	si:dkey-98f17.5	100	74.231	Gasterosteus_aculeatus
ENSPMEG00000024198	si:ch211-11k18.4	99	62.356	ENSHBUG00000008331	si:dkey-98f17.5	100	61.556	Haplochromis_burtoni
ENSPMEG00000024198	si:ch211-11k18.4	100	87.805	ENSHBUG00000020638	si:ch211-11k18.4	100	87.805	Haplochromis_burtoni
ENSPMEG00000024198	si:ch211-11k18.4	99	58.969	ENSHCOG00000016505	si:dkey-98f17.5	98	58.969	Hippocampus_comes
ENSPMEG00000024198	si:ch211-11k18.4	99	87.111	ENSHCOG00000014773	si:ch211-11k18.4	100	87.111	Hippocampus_comes
ENSPMEG00000024198	si:ch211-11k18.4	92	69.674	ENSIPUG00000016694	si:ch211-11k18.4	85	70.466	Ictalurus_punctatus
ENSPMEG00000024198	si:ch211-11k18.4	99	58.000	ENSIPUG00000019981	si:dkey-98f17.5	100	58.000	Ictalurus_punctatus
ENSPMEG00000024198	si:ch211-11k18.4	99	77.829	ENSIPUG00000016678	si:ch211-11k18.4	99	77.829	Ictalurus_punctatus
ENSPMEG00000024198	si:ch211-11k18.4	99	88.889	ENSKMAG00000009327	si:ch211-11k18.4	99	88.889	Kryptolebias_marmoratus
ENSPMEG00000024198	si:ch211-11k18.4	99	60.970	ENSKMAG00000014997	si:dkey-98f17.5	100	59.778	Kryptolebias_marmoratus
ENSPMEG00000024198	si:ch211-11k18.4	99	62.125	ENSLBEG00000012756	si:dkey-98f17.5	100	61.333	Labrus_bergylta
ENSPMEG00000024198	si:ch211-11k18.4	99	59.579	ENSLACG00000017433	si:dkey-98f17.5	98	59.459	Latimeria_chalumnae
ENSPMEG00000024198	si:ch211-11k18.4	99	71.840	ENSLACG00000006280	si:ch211-11k18.4	100	71.840	Latimeria_chalumnae
ENSPMEG00000024198	si:ch211-11k18.4	99	63.048	ENSLACG00000004899	-	99	62.806	Latimeria_chalumnae
ENSPMEG00000024198	si:ch211-11k18.4	99	59.770	ENSLOCG00000003824	si:dkey-98f17.5	99	59.645	Lepisosteus_oculatus
ENSPMEG00000024198	si:ch211-11k18.4	99	88.915	ENSMAMG00000002536	si:ch211-11k18.4	99	88.915	Mastacembelus_armatus
ENSPMEG00000024198	si:ch211-11k18.4	99	61.663	ENSMAMG00000014528	si:dkey-98f17.5	100	60.889	Mastacembelus_armatus
ENSPMEG00000024198	si:ch211-11k18.4	100	87.361	ENSMZEG00005008941	si:ch211-11k18.4	100	87.361	Maylandia_zebra
ENSPMEG00000024198	si:ch211-11k18.4	99	62.356	ENSMZEG00005016572	si:dkey-98f17.5	100	61.556	Maylandia_zebra
ENSPMEG00000024198	si:ch211-11k18.4	100	80.710	ENSMMOG00000012485	si:ch211-11k18.4	100	80.710	Mola_mola
ENSPMEG00000024198	si:ch211-11k18.4	100	87.805	ENSMALG00000019735	si:ch211-11k18.4	100	87.805	Monopterus_albus
ENSPMEG00000024198	si:ch211-11k18.4	99	61.806	ENSMALG00000012761	si:dkey-98f17.5	100	61.818	Monopterus_albus
ENSPMEG00000024198	si:ch211-11k18.4	99	61.806	ENSNBRG00000006068	si:dkey-98f17.5	100	61.024	Neolamprologus_brichardi
ENSPMEG00000024198	si:ch211-11k18.4	99	87.529	ENSNBRG00000002220	si:ch211-11k18.4	99	87.529	Neolamprologus_brichardi
ENSPMEG00000024198	si:ch211-11k18.4	99	62.587	ENSONIG00000013568	si:dkey-98f17.5	100	61.778	Oreochromis_niloticus
ENSPMEG00000024198	si:ch211-11k18.4	100	88.692	ENSONIG00000019412	si:ch211-11k18.4	100	88.692	Oreochromis_niloticus
ENSPMEG00000024198	si:ch211-11k18.4	100	87.583	ENSORLG00000012015	si:ch211-11k18.4	100	87.583	Oryzias_latipes
ENSPMEG00000024198	si:ch211-11k18.4	91	62.683	ENSORLG00000007958	si:dkey-98f17.5	95	62.439	Oryzias_latipes
ENSPMEG00000024198	si:ch211-11k18.4	100	87.140	ENSORLG00020012386	si:ch211-11k18.4	100	87.140	Oryzias_latipes_hni
ENSPMEG00000024198	si:ch211-11k18.4	99	61.432	ENSORLG00020013350	si:dkey-98f17.5	100	60.444	Oryzias_latipes_hni
ENSPMEG00000024198	si:ch211-11k18.4	99	61.432	ENSORLG00015002000	si:dkey-98f17.5	100	60.444	Oryzias_latipes_hsok
ENSPMEG00000024198	si:ch211-11k18.4	100	87.805	ENSORLG00015022862	si:ch211-11k18.4	100	87.805	Oryzias_latipes_hsok
ENSPMEG00000024198	si:ch211-11k18.4	99	61.290	ENSOMEG00000003154	si:dkey-98f17.5	100	60.444	Oryzias_melastigma
ENSPMEG00000024198	si:ch211-11k18.4	100	87.361	ENSOMEG00000018686	si:ch211-11k18.4	100	87.361	Oryzias_melastigma
ENSPMEG00000024198	si:ch211-11k18.4	99	80.444	ENSPKIG00000018807	si:ch211-11k18.4	100	80.444	Paramormyrops_kingsleyae
ENSPMEG00000024198	si:ch211-11k18.4	99	77.083	ENSPKIG00000023918	-	98	76.667	Paramormyrops_kingsleyae
ENSPMEG00000024198	si:ch211-11k18.4	99	61.060	ENSPKIG00000024621	si:dkey-98f17.5	100	60.310	Paramormyrops_kingsleyae
ENSPMEG00000024198	si:ch211-11k18.4	99	60.970	ENSPMGG00000019065	si:dkey-98f17.5	100	60.222	Periophthalmus_magnuspinnatus
ENSPMEG00000024198	si:ch211-11k18.4	100	86.475	ENSPMGG00000016507	si:ch211-11k18.4	100	86.475	Periophthalmus_magnuspinnatus
ENSPMEG00000024198	si:ch211-11k18.4	100	99.778	ENSPFOG00000007976	si:ch211-11k18.4	100	99.778	Poecilia_formosa
ENSPMEG00000024198	si:ch211-11k18.4	99	61.468	ENSPFOG00000015142	si:dkey-98f17.5	100	60.706	Poecilia_formosa
ENSPMEG00000024198	si:ch211-11k18.4	99	61.894	ENSPLAG00000003709	si:dkey-98f17.5	100	61.111	Poecilia_latipinna
ENSPMEG00000024198	si:ch211-11k18.4	100	99.557	ENSPLAG00000019794	si:ch211-11k18.4	100	99.557	Poecilia_latipinna
ENSPMEG00000024198	si:ch211-11k18.4	97	93.176	ENSPREG00000015319	si:ch211-11k18.4	97	93.176	Poecilia_reticulata
ENSPMEG00000024198	si:ch211-11k18.4	99	60.648	ENSPREG00000000708	si:dkey-98f17.5	100	60.682	Poecilia_reticulata
ENSPMEG00000024198	si:ch211-11k18.4	100	87.805	ENSPNYG00000017099	si:ch211-11k18.4	100	87.805	Pundamilia_nyererei
ENSPMEG00000024198	si:ch211-11k18.4	99	62.356	ENSPNYG00000017266	si:dkey-98f17.5	100	61.556	Pundamilia_nyererei
ENSPMEG00000024198	si:ch211-11k18.4	99	61.432	ENSPNAG00000021352	si:dkey-98f17.5	100	61.111	Pygocentrus_nattereri
ENSPMEG00000024198	si:ch211-11k18.4	99	84.028	ENSPNAG00000022138	si:ch211-11k18.4	99	83.964	Pygocentrus_nattereri
ENSPMEG00000024198	si:ch211-11k18.4	99	78.174	ENSSFOG00015000985	si:ch211-11k18.4	94	78.174	Scleropages_formosus
ENSPMEG00000024198	si:ch211-11k18.4	99	59.404	ENSSFOG00015017965	si:dkey-98f17.5	100	58.186	Scleropages_formosus
ENSPMEG00000024198	si:ch211-11k18.4	100	62.069	ENSSMAG00000011905	si:dkey-98f17.5	100	61.111	Scophthalmus_maximus
ENSPMEG00000024198	si:ch211-11k18.4	100	87.140	ENSSMAG00000009651	si:ch211-11k18.4	100	87.140	Scophthalmus_maximus
ENSPMEG00000024198	si:ch211-11k18.4	98	61.449	ENSSDUG00000013457	si:dkey-98f17.5	99	60.674	Seriola_dumerili
ENSPMEG00000024198	si:ch211-11k18.4	100	88.692	ENSSDUG00000016411	si:ch211-11k18.4	100	88.692	Seriola_dumerili
ENSPMEG00000024198	si:ch211-11k18.4	100	88.692	ENSSLDG00000019145	si:ch211-11k18.4	100	88.692	Seriola_lalandi_dorsalis
ENSPMEG00000024198	si:ch211-11k18.4	98	61.215	ENSSLDG00000025395	si:dkey-98f17.5	99	60.449	Seriola_lalandi_dorsalis
ENSPMEG00000024198	si:ch211-11k18.4	87	67.905	ENSSPUG00000010096	-	99	67.005	Sphenodon_punctatus
ENSPMEG00000024198	si:ch211-11k18.4	99	62.587	ENSSPAG00000018800	si:dkey-98f17.5	100	61.778	Stegastes_partitus
ENSPMEG00000024198	si:ch211-11k18.4	100	88.914	ENSSPAG00000010697	si:ch211-11k18.4	100	88.914	Stegastes_partitus
ENSPMEG00000024198	si:ch211-11k18.4	99	61.201	ENSTRUG00000021287	si:dkey-98f17.5	100	60.222	Takifugu_rubripes
ENSPMEG00000024198	si:ch211-11k18.4	100	86.253	ENSTRUG00000020291	si:ch211-11k18.4	100	86.253	Takifugu_rubripes
ENSPMEG00000024198	si:ch211-11k18.4	99	67.257	ENSXETG00000031783	-	99	67.257	Xenopus_tropicalis
ENSPMEG00000024198	si:ch211-11k18.4	99	61.343	ENSXCOG00000017002	si:dkey-98f17.5	100	60.579	Xiphophorus_couchianus
ENSPMEG00000024198	si:ch211-11k18.4	100	90.687	ENSXCOG00000018094	si:ch211-11k18.4	100	90.244	Xiphophorus_couchianus
ENSPMEG00000024198	si:ch211-11k18.4	99	61.201	ENSXMAG00000007688	si:dkey-98f17.5	95	60.444	Xiphophorus_maculatus
ENSPMEG00000024198	si:ch211-11k18.4	100	96.896	ENSXMAG00000021235	si:ch211-11k18.4	100	96.896	Xiphophorus_maculatus