EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPMEG00000024263 (Gene tree)
Gene ID: 106920518
Gene Symbol: rbm4.3 (1 of many)
Alias: -
Full Name: RNA-binding protein 4.1-like
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Minus strand
Length: 6265 bases
Position: chrKQ551410.1:104667-110931
Accession: 106920518
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000034905	RRM_5	PF13893.6	5.9e-09	1	2
ENSPMEP00000034905	RRM_5	PF13893.6	5.9e-09	2	2
ENSPMEP00000034905	RRM_1	PF00076.22	1.9e-28	1	2
ENSPMEP00000034905	RRM_1	PF00076.22	1.9e-28	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000035346	-	4366	XM_014991558	ENSPMEP00000034905	340 (aa)	XP_014847044	UPI0004446123

Gene Model

Click here to download ENSPMEG00000024263's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000024263's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPMEG00000024263	rbm4.3	100	90.831	ENSPMEG00000024271	rbm4.3	100	90.831
ENSPMEG00000024263	rbm4.3	99	64.589	ENSPMEG00000024260	rbm4.3	99	64.306
ENSPMEG00000024263	rbm4.3	83	53.333	ENSPMEG00000006290	rbm4.1	66	53.333

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000024263	rbm4.3	97	61.877	ENSAPOG00000002991	rbm4.3	96	61.877	Acanthochromis_polyacanthus
ENSPMEG00000024263	rbm4.3	100	79.830	ENSAPOG00000002953	rbm4.3	100	75.852	Acanthochromis_polyacanthus
ENSPMEG00000024263	rbm4.3	97	63.018	ENSACIG00000021295	rbm4.3	96	65.000	Amphilophus_citrinellus
ENSPMEG00000024263	rbm4.3	100	80.994	ENSACIG00000021311	-	100	78.070	Amphilophus_citrinellus
ENSPMEG00000024263	rbm4.3	97	60.819	ENSAOCG00000007992	rbm4.3	96	62.463	Amphiprion_ocellaris
ENSPMEG00000024263	rbm4.3	100	78.917	ENSAOCG00000008015	rbm4.3	100	75.214	Amphiprion_ocellaris
ENSPMEG00000024263	rbm4.3	97	61.111	ENSAPEG00000017288	rbm4.3	96	62.463	Amphiprion_percula
ENSPMEG00000024263	rbm4.3	100	79.772	ENSAPEG00000017324	rbm4.3	100	74.644	Amphiprion_percula
ENSPMEG00000024263	rbm4.3	97	66.864	ENSATEG00000019395	rbm4.3	96	63.798	Anabas_testudineus
ENSPMEG00000024263	rbm4.3	100	78.348	ENSATEG00000019375	rbm4.3	100	75.783	Anabas_testudineus
ENSPMEG00000024263	rbm4.3	100	81.287	ENSACLG00000010620	-	100	78.363	Astatotilapia_calliptera
ENSPMEG00000024263	rbm4.3	99	64.773	ENSACLG00000010642	rbm4.3	99	64.489	Astatotilapia_calliptera
ENSPMEG00000024263	rbm4.3	61	76.190	ENSAMXG00000040224	rbm4.3	82	76.000	Astyanax_mexicanus
ENSPMEG00000024263	rbm4.3	100	75.424	ENSCSEG00000013659	rbm4.3	100	74.011	Cynoglossus_semilaevis
ENSPMEG00000024263	rbm4.3	100	90.882	ENSCVAG00000008508	rbm4.3	100	90.882	Cyprinodon_variegatus
ENSPMEG00000024263	rbm4.3	99	62.678	ENSCVAG00000008502	rbm4.3	99	64.205	Cyprinodon_variegatus
ENSPMEG00000024263	rbm4.3	95	65.976	ENSDARG00000022129	rbm4.3	97	65.789	Danio_rerio
ENSPMEG00000024263	rbm4.3	100	66.011	ENSELUG00000022168	rbm4.3	100	66.289	Esox_lucius
ENSPMEG00000024263	rbm4.3	99	70.822	ENSELUG00000022155	rbm4.3	99	71.105	Esox_lucius
ENSPMEG00000024263	rbm4.3	99	70.339	ENSELUG00000022150	rbm4.3	97	68.605	Esox_lucius
ENSPMEG00000024263	rbm4.3	81	89.170	ENSFHEG00000023137	rbm4.3	86	89.011	Fundulus_heteroclitus
ENSPMEG00000024263	rbm4.3	100	61.408	ENSGAFG00000001935	rbm4.3	100	61.408	Gambusia_affinis
ENSPMEG00000024263	rbm4.3	96	58.017	ENSGACG00000019980	rbm4.3	95	60.756	Gasterosteus_aculeatus
ENSPMEG00000024263	rbm4.3	100	81.287	ENSHBUG00000009020	-	100	78.363	Haplochromis_burtoni
ENSPMEG00000024263	rbm4.3	99	64.773	ENSHBUG00000009051	rbm4.3	99	64.489	Haplochromis_burtoni
ENSPMEG00000024263	rbm4.3	95	73.574	ENSHCOG00000010349	rbm4.3	100	73.295	Hippocampus_comes
ENSPMEG00000024263	rbm4.3	100	63.483	ENSIPUG00000022943	RBM4B	100	61.667	Ictalurus_punctatus
ENSPMEG00000024263	rbm4.3	100	80.588	ENSKMAG00000017468	rbm4.3	100	79.706	Kryptolebias_marmoratus
ENSPMEG00000024263	rbm4.3	54	71.123	ENSLBEG00000001025	rbm4.3	79	71.839	Labrus_bergylta
ENSPMEG00000024263	rbm4.3	100	76.136	ENSLBEG00000001071	-	100	73.011	Labrus_bergylta
ENSPMEG00000024263	rbm4.3	95	59.392	ENSLOCG00000002755	rbm4.3	100	58.311	Lepisosteus_oculatus
ENSPMEG00000024263	rbm4.3	100	78.348	ENSMAMG00000004715	-	84	75.214	Mastacembelus_armatus
ENSPMEG00000024263	rbm4.3	97	63.050	ENSMAMG00000004701	rbm4.3	96	62.059	Mastacembelus_armatus
ENSPMEG00000024263	rbm4.3	100	77.193	ENSMZEG00005007417	-	100	74.854	Maylandia_zebra
ENSPMEG00000024263	rbm4.3	99	64.773	ENSMZEG00005028540	rbm4.3	99	64.489	Maylandia_zebra
ENSPMEG00000024263	rbm4.3	87	74.161	ENSMZEG00005028537	-	83	74.161	Maylandia_zebra
ENSPMEG00000024263	rbm4.3	88	68.456	ENSMZEG00005007441	rbm4.3	79	67.568	Maylandia_zebra
ENSPMEG00000024263	rbm4.3	97	61.290	ENSMMOG00000012191	rbm4.3	96	62.463	Mola_mola
ENSPMEG00000024263	rbm4.3	98	61.862	ENSMALG00000003032	rbm4.3	94	60.191	Monopterus_albus
ENSPMEG00000024263	rbm4.3	97	61.538	ENSMALG00000015014	-	89	60.635	Monopterus_albus
ENSPMEG00000024263	rbm4.3	91	79.032	ENSMALG00000003001	rbm4.3	87	80.872	Monopterus_albus
ENSPMEG00000024263	rbm4.3	97	64.602	ENSNBRG00000012372	rbm4.3	96	63.422	Neolamprologus_brichardi
ENSPMEG00000024263	rbm4.3	97	63.450	ENSONIG00000018378	rbm4.3	96	62.281	Oreochromis_niloticus
ENSPMEG00000024263	rbm4.3	100	81.287	ENSONIG00000018380	-	100	78.363	Oreochromis_niloticus
ENSPMEG00000024263	rbm4.3	100	77.143	ENSORLG00000012473	rbm4.3	100	76.000	Oryzias_latipes
ENSPMEG00000024263	rbm4.3	97	57.558	ENSORLG00000024749	rbm4.3	96	56.069	Oryzias_latipes
ENSPMEG00000024263	rbm4.3	100	79.429	ENSORLG00000011589	rbm4.3	100	78.286	Oryzias_latipes
ENSPMEG00000024263	rbm4.3	100	77.143	ENSORLG00020012464	rbm4.3	100	76.000	Oryzias_latipes_hni
ENSPMEG00000024263	rbm4.3	99	57.507	ENSORLG00020012482	rbm4.3	99	57.550	Oryzias_latipes_hni
ENSPMEG00000024263	rbm4.3	100	79.429	ENSORLG00020012474	rbm4.3	100	78.286	Oryzias_latipes_hni
ENSPMEG00000024263	rbm4.3	100	77.143	ENSORLG00015013686	rbm4.3	100	76.000	Oryzias_latipes_hsok
ENSPMEG00000024263	rbm4.3	100	77.429	ENSORLG00015013698	rbm4.3	100	78.571	Oryzias_latipes_hsok
ENSPMEG00000024263	rbm4.3	99	57.062	ENSORLG00015013721	rbm4.3	96	54.913	Oryzias_latipes_hsok
ENSPMEG00000024263	rbm4.3	97	59.366	ENSOMEG00000005950	rbm4.3	96	59.531	Oryzias_melastigma
ENSPMEG00000024263	rbm4.3	100	72.394	ENSOMEG00000005918	rbm4.3	100	73.729	Oryzias_melastigma
ENSPMEG00000024263	rbm4.3	97	78.171	ENSOMEG00000005929	rbm4.3	100	78.348	Oryzias_melastigma
ENSPMEG00000024263	rbm4.3	93	68.536	ENSPKIG00000007001	rbm4.3	100	64.306	Paramormyrops_kingsleyae
ENSPMEG00000024263	rbm4.3	99	64.589	ENSPLAG00000006077	rbm4.3	99	64.689	Poecilia_latipinna
ENSPMEG00000024263	rbm4.3	100	91.117	ENSPLAG00000006131	rbm4.3	100	91.117	Poecilia_latipinna
ENSPMEG00000024263	rbm4.3	100	85.387	ENSPREG00000002156	rbm4.3	100	85.387	Poecilia_reticulata
ENSPMEG00000024263	rbm4.3	99	64.205	ENSPREG00000002093	-	99	65.156	Poecilia_reticulata
ENSPMEG00000024263	rbm4.3	100	81.287	ENSPNYG00000018541	rbm4.3	100	78.363	Pundamilia_nyererei
ENSPMEG00000024263	rbm4.3	99	65.341	ENSPNYG00000018564	rbm4.3	99	65.057	Pundamilia_nyererei
ENSPMEG00000024263	rbm4.3	100	65.479	ENSPNAG00000013053	rbm4.3	100	64.738	Pygocentrus_nattereri
ENSPMEG00000024263	rbm4.3	100	63.388	ENSSFOG00015015563	rbm4.3	100	61.749	Scleropages_formosus
ENSPMEG00000024263	rbm4.3	97	64.412	ENSSMAG00000013653	rbm4.3	96	59.763	Scophthalmus_maximus
ENSPMEG00000024263	rbm4.3	100	79.202	ENSSMAG00000013644	rbm4.3	100	74.074	Scophthalmus_maximus
ENSPMEG00000024263	rbm4.3	97	65.306	ENSSDUG00000018422	rbm4.3	96	64.327	Seriola_dumerili
ENSPMEG00000024263	rbm4.3	100	78.632	ENSSDUG00000018435	rbm4.3	100	75.499	Seriola_dumerili
ENSPMEG00000024263	rbm4.3	97	64.912	ENSSLDG00000017182	rbm4.3	96	63.930	Seriola_lalandi_dorsalis
ENSPMEG00000024263	rbm4.3	100	78.632	ENSSLDG00000017204	rbm4.3	100	75.499	Seriola_lalandi_dorsalis
ENSPMEG00000024263	rbm4.3	100	78.632	ENSSPAG00000008062	rbm4.3	100	74.929	Stegastes_partitus
ENSPMEG00000024263	rbm4.3	96	61.538	ENSSPAG00000008041	rbm4.3	81	60.947	Stegastes_partitus
ENSPMEG00000024263	rbm4.3	100	75.637	ENSTRUG00000020901	rbm4.3	100	71.671	Takifugu_rubripes
ENSPMEG00000024263	rbm4.3	97	60.882	ENSTRUG00000023874	rbm4.3	96	64.516	Takifugu_rubripes
ENSPMEG00000024263	rbm4.3	100	73.504	ENSTNIG00000005668	rbm4.3	100	70.940	Tetraodon_nigroviridis
ENSPMEG00000024263	rbm4.3	97	63.848	ENSXCOG00000005996	rbm4.3	97	65.116	Xiphophorus_couchianus
ENSPMEG00000024263	rbm4.3	100	98.529	ENSXCOG00000006001	rbm4.3	100	98.529	Xiphophorus_couchianus
ENSPMEG00000024263	rbm4.3	100	98.235	ENSXMAG00000021997	rbm4.3	100	98.235	Xiphophorus_maculatus
ENSPMEG00000024263	rbm4.3	97	63.848	ENSXMAG00000025173	rbm4.3	99	65.625	Xiphophorus_maculatus
ENSPMEG00000024263	rbm4.3	100	90.831	ENSXMAG00000011698	rbm4.3	100	90.831	Xiphophorus_maculatus