EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPMEG00000024271 (Gene tree)
Gene ID: 106920516
Gene Symbol: rbm4.3 (1 of many)
Alias: -
Full Name: RNA-binding protein 4B-like
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Minus strand
Length: 17110 bases
Position: chrKQ551410.1:93822-110931
Accession: 106920516
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000034909	RRM_5	PF13893.6	3.9e-09	1	2
ENSPMEP00000034909	RRM_5	PF13893.6	3.9e-09	2	2
ENSPMEP00000034912	RRM_5	PF13893.6	3.9e-09	1	2
ENSPMEP00000034912	RRM_5	PF13893.6	3.9e-09	2	2
ENSPMEP00000034909	RRM_1	PF00076.22	2.1e-28	1	2
ENSPMEP00000034909	RRM_1	PF00076.22	2.1e-28	2	2
ENSPMEP00000034912	RRM_1	PF00076.22	2.1e-28	1	2
ENSPMEP00000034912	RRM_1	PF00076.22	2.1e-28	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000030753	-	5641	XM_014991551	ENSPMEP00000034909	348 (aa)	XP_014847037	UPI00072DFE8F
ENSPMET00000030755	-	5661	-	ENSPMEP00000034912	348 (aa)	-	UPI00072DFE8F

Gene Model

Click here to download ENSPMEG00000024271's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000024271's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPMEG00000024271	rbm4.3	86	53.333	ENSPMEG00000006290	rbm4.1	66	53.333
ENSPMEG00000024271	rbm4.3	97	63.953	ENSPMEG00000024260	rbm4.3	99	63.739
ENSPMEG00000024271	rbm4.3	100	90.831	ENSPMEG00000024263	rbm4.3	100	90.831

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000024271	rbm4.3	100	78.693	ENSAPOG00000002953	rbm4.3	100	76.989	Acanthochromis_polyacanthus
ENSPMEG00000024271	rbm4.3	97	61.584	ENSAPOG00000002991	rbm4.3	97	62.500	Acanthochromis_polyacanthus
ENSPMEG00000024271	rbm4.3	100	74.359	ENSACIG00000021311	-	100	74.359	Amphilophus_citrinellus
ENSPMEG00000024271	rbm4.3	97	62.426	ENSACIG00000021295	rbm4.3	99	64.103	Amphilophus_citrinellus
ENSPMEG00000024271	rbm4.3	97	61.765	ENSAOCG00000007992	rbm4.3	99	62.216	Amphiprion_ocellaris
ENSPMEG00000024271	rbm4.3	100	77.778	ENSAOCG00000008015	rbm4.3	100	76.353	Amphiprion_ocellaris
ENSPMEG00000024271	rbm4.3	97	62.059	ENSAPEG00000017288	rbm4.3	99	62.216	Amphiprion_percula
ENSPMEG00000024271	rbm4.3	100	78.632	ENSAPEG00000017324	rbm4.3	100	75.783	Amphiprion_percula
ENSPMEG00000024271	rbm4.3	100	77.493	ENSATEG00000019375	rbm4.3	100	77.208	Anabas_testudineus
ENSPMEG00000024271	rbm4.3	97	63.450	ENSATEG00000019395	rbm4.3	97	62.791	Anabas_testudineus
ENSPMEG00000024271	rbm4.3	100	74.644	ENSACLG00000010620	-	100	74.644	Astatotilapia_calliptera
ENSPMEG00000024271	rbm4.3	97	64.307	ENSACLG00000010642	rbm4.3	97	63.450	Astatotilapia_calliptera
ENSPMEG00000024271	rbm4.3	54	76.596	ENSAMXG00000040224	rbm4.3	70	76.744	Astyanax_mexicanus
ENSPMEG00000024271	rbm4.3	100	72.034	ENSCSEG00000013659	rbm4.3	100	70.621	Cynoglossus_semilaevis
ENSPMEG00000024271	rbm4.3	98	61.739	ENSCVAG00000008502	rbm4.3	99	63.352	Cyprinodon_variegatus
ENSPMEG00000024271	rbm4.3	100	84.527	ENSCVAG00000008508	rbm4.3	100	84.527	Cyprinodon_variegatus
ENSPMEG00000024271	rbm4.3	96	67.160	ENSDARG00000022129	rbm4.3	99	66.477	Danio_rerio
ENSPMEG00000024271	rbm4.3	98	69.253	ENSELUG00000022155	rbm4.3	99	69.405	Esox_lucius
ENSPMEG00000024271	rbm4.3	99	68.927	ENSELUG00000022150	rbm4.3	99	67.422	Esox_lucius
ENSPMEG00000024271	rbm4.3	100	64.067	ENSELUG00000022168	rbm4.3	100	64.326	Esox_lucius
ENSPMEG00000024271	rbm4.3	80	87.004	ENSFHEG00000023137	rbm4.3	86	86.813	Fundulus_heteroclitus
ENSPMEG00000024271	rbm4.3	64	67.568	ENSGMOG00000004032	rbm4.3	53	66.216	Gadus_morhua
ENSPMEG00000024271	rbm4.3	100	61.690	ENSGAFG00000001935	rbm4.3	100	61.690	Gambusia_affinis
ENSPMEG00000024271	rbm4.3	91	71.667	ENSGACG00000019980	rbm4.3	99	59.218	Gasterosteus_aculeatus
ENSPMEG00000024271	rbm4.3	100	74.644	ENSHBUG00000009020	-	100	74.644	Haplochromis_burtoni
ENSPMEG00000024271	rbm4.3	97	64.307	ENSHBUG00000009051	rbm4.3	97	63.450	Haplochromis_burtoni
ENSPMEG00000024271	rbm4.3	95	72.727	ENSHCOG00000010349	rbm4.3	100	71.023	Hippocampus_comes
ENSPMEG00000024271	rbm4.3	100	62.921	ENSIPUG00000022943	RBM4B	100	63.483	Ictalurus_punctatus
ENSPMEG00000024271	rbm4.3	100	76.791	ENSKMAG00000017468	rbm4.3	100	76.286	Kryptolebias_marmoratus
ENSPMEG00000024271	rbm4.3	100	75.568	ENSLBEG00000001071	-	100	74.716	Labrus_bergylta
ENSPMEG00000024271	rbm4.3	53	68.984	ENSLBEG00000001025	rbm4.3	79	69.540	Labrus_bergylta
ENSPMEG00000024271	rbm4.3	96	60.497	ENSLOCG00000002755	rbm4.3	100	60.686	Lepisosteus_oculatus
ENSPMEG00000024271	rbm4.3	97	63.343	ENSMAMG00000004701	rbm4.3	97	64.140	Mastacembelus_armatus
ENSPMEG00000024271	rbm4.3	100	77.208	ENSMAMG00000004715	-	84	76.353	Mastacembelus_armatus
ENSPMEG00000024271	rbm4.3	86	65.436	ENSMZEG00005007441	rbm4.3	79	64.527	Maylandia_zebra
ENSPMEG00000024271	rbm4.3	100	70.655	ENSMZEG00005007417	-	100	71.225	Maylandia_zebra
ENSPMEG00000024271	rbm4.3	85	70.470	ENSMZEG00005028537	-	83	70.470	Maylandia_zebra
ENSPMEG00000024271	rbm4.3	97	64.307	ENSMZEG00005028540	rbm4.3	97	63.450	Maylandia_zebra
ENSPMEG00000024271	rbm4.3	95	62.048	ENSMMOG00000012191	rbm4.3	99	61.190	Mola_mola
ENSPMEG00000024271	rbm4.3	97	61.834	ENSMALG00000015014	-	97	61.404	Monopterus_albus
ENSPMEG00000024271	rbm4.3	91	61.950	ENSMALG00000003032	rbm4.3	95	61.321	Monopterus_albus
ENSPMEG00000024271	rbm4.3	89	75.484	ENSMALG00000003001	rbm4.3	87	77.181	Monopterus_albus
ENSPMEG00000024271	rbm4.3	97	64.012	ENSNBRG00000012372	rbm4.3	97	63.158	Neolamprologus_brichardi
ENSPMEG00000024271	rbm4.3	100	74.644	ENSONIG00000018380	-	100	74.644	Oreochromis_niloticus
ENSPMEG00000024271	rbm4.3	97	62.865	ENSONIG00000018378	rbm4.3	97	62.029	Oreochromis_niloticus
ENSPMEG00000024271	rbm4.3	97	56.395	ENSORLG00000024749	rbm4.3	99	54.722	Oryzias_latipes
ENSPMEG00000024271	rbm4.3	100	74.095	ENSORLG00000012473	rbm4.3	100	72.981	Oryzias_latipes
ENSPMEG00000024271	rbm4.3	100	75.209	ENSORLG00000011589	rbm4.3	100	74.095	Oryzias_latipes
ENSPMEG00000024271	rbm4.3	100	75.209	ENSORLG00020012474	rbm4.3	100	74.095	Oryzias_latipes_hni
ENSPMEG00000024271	rbm4.3	98	57.061	ENSORLG00020012482	rbm4.3	99	54.342	Oryzias_latipes_hni
ENSPMEG00000024271	rbm4.3	100	74.095	ENSORLG00020012464	rbm4.3	100	72.981	Oryzias_latipes_hni
ENSPMEG00000024271	rbm4.3	100	74.373	ENSORLG00015013686	rbm4.3	100	73.259	Oryzias_latipes_hsok
ENSPMEG00000024271	rbm4.3	97	55.523	ENSORLG00015013721	rbm4.3	99	54.190	Oryzias_latipes_hsok
ENSPMEG00000024271	rbm4.3	100	73.259	ENSORLG00015013698	rbm4.3	100	74.373	Oryzias_latipes_hsok
ENSPMEG00000024271	rbm4.3	100	72.549	ENSOMEG00000005918	rbm4.3	100	72.829	Oryzias_melastigma
ENSPMEG00000024271	rbm4.3	97	74.425	ENSOMEG00000005929	rbm4.3	100	74.167	Oryzias_melastigma
ENSPMEG00000024271	rbm4.3	97	59.593	ENSOMEG00000005950	rbm4.3	99	58.807	Oryzias_melastigma
ENSPMEG00000024271	rbm4.3	94	66.071	ENSPKIG00000007001	rbm4.3	100	64.326	Paramormyrops_kingsleyae
ENSPMEG00000024271	rbm4.3	97	63.953	ENSPLAG00000006077	rbm4.3	99	64.124	Poecilia_latipinna
ENSPMEG00000024271	rbm4.3	100	99.138	ENSPLAG00000006131	rbm4.3	100	99.138	Poecilia_latipinna
ENSPMEG00000024271	rbm4.3	100	91.667	ENSPREG00000002156	rbm4.3	100	91.667	Poecilia_reticulata
ENSPMEG00000024271	rbm4.3	98	63.873	ENSPREG00000002093	-	99	64.589	Poecilia_reticulata
ENSPMEG00000024271	rbm4.3	97	64.897	ENSPNYG00000018564	rbm4.3	97	64.035	Pundamilia_nyererei
ENSPMEG00000024271	rbm4.3	100	74.644	ENSPNYG00000018541	rbm4.3	100	74.644	Pundamilia_nyererei
ENSPMEG00000024271	rbm4.3	100	66.391	ENSPNAG00000013053	rbm4.3	100	65.565	Pygocentrus_nattereri
ENSPMEG00000024271	rbm4.3	100	62.842	ENSSFOG00015015563	rbm4.3	100	61.749	Scleropages_formosus
ENSPMEG00000024271	rbm4.3	97	63.235	ENSSMAG00000013653	rbm4.3	97	61.808	Scophthalmus_maximus
ENSPMEG00000024271	rbm4.3	100	78.063	ENSSMAG00000013644	rbm4.3	100	75.214	Scophthalmus_maximus
ENSPMEG00000024271	rbm4.3	100	77.493	ENSSDUG00000018435	rbm4.3	100	76.638	Seriola_dumerili
ENSPMEG00000024271	rbm4.3	97	64.723	ENSSDUG00000018422	rbm4.3	99	63.636	Seriola_dumerili
ENSPMEG00000024271	rbm4.3	97	64.327	ENSSLDG00000017182	rbm4.3	99	63.068	Seriola_lalandi_dorsalis
ENSPMEG00000024271	rbm4.3	100	77.493	ENSSLDG00000017204	rbm4.3	100	76.638	Seriola_lalandi_dorsalis
ENSPMEG00000024271	rbm4.3	100	77.493	ENSSPAG00000008062	rbm4.3	100	76.068	Stegastes_partitus
ENSPMEG00000024271	rbm4.3	97	61.721	ENSSPAG00000008041	rbm4.3	83	62.209	Stegastes_partitus
ENSPMEG00000024271	rbm4.3	97	60.000	ENSTRUG00000023874	rbm4.3	99	62.500	Takifugu_rubripes
ENSPMEG00000024271	rbm4.3	100	75.354	ENSTRUG00000020901	rbm4.3	100	73.654	Takifugu_rubripes
ENSPMEG00000024271	rbm4.3	100	72.934	ENSTNIG00000005668	rbm4.3	100	72.650	Tetraodon_nigroviridis
ENSPMEG00000024271	rbm4.3	97	64.431	ENSXCOG00000005996	rbm4.3	97	65.706	Xiphophorus_couchianus
ENSPMEG00000024271	rbm4.3	100	90.258	ENSXCOG00000006001	rbm4.3	100	90.258	Xiphophorus_couchianus
ENSPMEG00000024271	rbm4.3	100	97.701	ENSXMAG00000011698	rbm4.3	100	97.701	Xiphophorus_maculatus
ENSPMEG00000024271	rbm4.3	97	64.140	ENSXMAG00000025173	rbm4.3	98	65.994	Xiphophorus_maculatus
ENSPMEG00000024271	rbm4.3	100	90.258	ENSXMAG00000021997	rbm4.3	100	90.258	Xiphophorus_maculatus