EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMGG00000000075 (Gene tree)
Gene ID: -
Gene Symbol: trub1
Alias: -
Full Name: TruB pseudouridine (psi) synthase family member 1
Gene Type: protein_coding
Species: Periophthalmus_magnuspinnatus
Status: putative
Strand: Plus strand
Length: 3132 bases
Position: chrKN463020.1:1337201-1340332
Accession: ZDB-GENE-080723-73
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMGP00000000071	TruB_N	PF01509.18	9.6e-46	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMGT00000000073	-	834	-	ENSPMGP00000000071	277 (aa)	-	-

Gene Model

Click here to download ENSPMGG00000000075's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMGG00000000075's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMGG00000000075	trub1	88	66.531	ENSG00000165832	TRUB1	70	66.531	Homo_sapiens
ENSPMGG00000000075	trub1	88	82.377	ENSAPOG00000020565	trub1	95	80.843	Acanthochromis_polyacanthus
ENSPMGG00000000075	trub1	88	65.182	ENSAMEG00000014931	TRUB1	70	65.182	Ailuropoda_melanoleuca
ENSPMGG00000000075	trub1	94	74.436	ENSACIG00000003060	trub1	89	74.436	Amphilophus_citrinellus
ENSPMGG00000000075	trub1	88	82.787	ENSAOCG00000017188	trub1	95	81.226	Amphiprion_ocellaris
ENSPMGG00000000075	trub1	92	81.226	ENSAPEG00000015209	trub1	95	81.226	Amphiprion_percula
ENSPMGG00000000075	trub1	88	79.184	ENSATEG00000023291	trub1	88	79.184	Anabas_testudineus
ENSPMGG00000000075	trub1	91	64.822	ENSAPLG00000006808	TRUB1	91	64.822	Anas_platyrhynchos
ENSPMGG00000000075	trub1	88	64.228	ENSACAG00000009282	TRUB1	88	64.228	Anolis_carolinensis
ENSPMGG00000000075	trub1	88	66.122	ENSANAG00000022870	TRUB1	70	66.122	Aotus_nancymaae
ENSPMGG00000000075	trub1	93	77.736	ENSACLG00000000823	trub1	95	77.736	Astatotilapia_calliptera
ENSPMGG00000000075	trub1	91	73.913	ENSAMXG00000015845	trub1	85	73.913	Astyanax_mexicanus
ENSPMGG00000000075	trub1	88	66.122	ENSBTAG00000012955	TRUB1	70	66.122	Bos_taurus
ENSPMGG00000000075	trub1	88	66.122	ENSCJAG00000047815	TRUB1	70	66.122	Callithrix_jacchus
ENSPMGG00000000075	trub1	88	65.714	ENSCAFG00000011688	TRUB1	70	65.714	Canis_familiaris
ENSPMGG00000000075	trub1	88	65.714	ENSCAFG00020013237	TRUB1	70	65.714	Canis_lupus_dingo
ENSPMGG00000000075	trub1	88	65.714	ENSCHIG00000020884	TRUB1	73	65.714	Capra_hircus
ENSPMGG00000000075	trub1	88	65.714	ENSTSYG00000000446	TRUB1	70	65.714	Carlito_syrichta
ENSPMGG00000000075	trub1	76	58.768	ENSCAPG00000017088	TRUB1	82	58.768	Cavia_aperea
ENSPMGG00000000075	trub1	66	63.934	ENSCPOG00000040236	-	75	63.934	Cavia_porcellus
ENSPMGG00000000075	trub1	67	62.903	ENSCPOG00000030129	-	72	62.903	Cavia_porcellus
ENSPMGG00000000075	trub1	91	64.567	ENSCCAG00000028842	TRUB1	72	64.567	Cebus_capucinus
ENSPMGG00000000075	trub1	88	66.122	ENSCATG00000033431	TRUB1	70	66.122	Cercocebus_atys
ENSPMGG00000000075	trub1	66	62.842	ENSCLAG00000008664	TRUB1	75	62.842	Chinchilla_lanigera
ENSPMGG00000000075	trub1	88	66.122	ENSCSAG00000004891	TRUB1	70	66.122	Chlorocebus_sabaeus
ENSPMGG00000000075	trub1	87	59.504	ENSCHOG00000011931	TRUB1	70	59.504	Choloepus_hoffmanni
ENSPMGG00000000075	trub1	95	62.500	ENSCPBG00000003051	TRUB1	94	62.500	Chrysemys_picta_bellii
ENSPMGG00000000075	trub1	88	66.122	ENSCANG00000029445	TRUB1	70	66.122	Colobus_angolensis_palliatus
ENSPMGG00000000075	trub1	76	67.453	ENSCGRG00001016772	-	71	67.290	Cricetulus_griseus_chok1gshd
ENSPMGG00000000075	trub1	86	58.403	ENSCGRG00001010322	-	68	56.917	Cricetulus_griseus_chok1gshd
ENSPMGG00000000075	trub1	86	67.227	ENSCGRG00000010806	Trub1	78	64.961	Cricetulus_griseus_crigri
ENSPMGG00000000075	trub1	91	73.518	ENSCSEG00000011261	trub1	82	73.518	Cynoglossus_semilaevis
ENSPMGG00000000075	trub1	96	76.404	ENSCVAG00000008791	trub1	82	76.404	Cyprinodon_variegatus
ENSPMGG00000000075	trub1	92	72.941	ENSDARG00000053805	trub1	99	82.353	Danio_rerio
ENSPMGG00000000075	trub1	88	63.265	ENSDNOG00000001069	TRUB1	70	63.265	Dasypus_novemcinctus
ENSPMGG00000000075	trub1	86	66.387	ENSDORG00000010431	Trub1	71	65.306	Dipodomys_ordii
ENSPMGG00000000075	trub1	64	63.504	ENSETEG00000009183	TRUB1	53	60.959	Echinops_telfairi
ENSPMGG00000000075	trub1	88	64.490	ENSEASG00005014739	TRUB1	70	64.490	Equus_asinus_asinus
ENSPMGG00000000075	trub1	88	64.490	ENSECAG00000007177	TRUB1	70	64.490	Equus_caballus
ENSPMGG00000000075	trub1	88	58.367	ENSEEUG00000013993	TRUB1	68	58.367	Erinaceus_europaeus
ENSPMGG00000000075	trub1	92	75.875	ENSELUG00000000502	trub1	88	77.075	Esox_lucius
ENSPMGG00000000075	trub1	88	66.122	ENSFCAG00000031927	TRUB1	70	66.122	Felis_catus
ENSPMGG00000000075	trub1	77	66.977	ENSFALG00000002232	TRUB1	83	66.977	Ficedula_albicollis
ENSPMGG00000000075	trub1	66	64.481	ENSFDAG00000008140	TRUB1	75	64.481	Fukomys_damarensis
ENSPMGG00000000075	trub1	99	73.571	ENSFHEG00000004016	trub1	96	73.571	Fundulus_heteroclitus
ENSPMGG00000000075	trub1	91	64.427	ENSGALG00000009091	TRUB1	89	64.427	Gallus_gallus
ENSPMGG00000000075	trub1	90	76.078	ENSGAFG00000009193	trub1	89	74.902	Gambusia_affinis
ENSPMGG00000000075	trub1	70	79.897	ENSGACG00000015387	trub1	95	79.897	Gasterosteus_aculeatus
ENSPMGG00000000075	trub1	90	65.737	ENSGAGG00000009758	TRUB1	75	63.636	Gopherus_agassizii
ENSPMGG00000000075	trub1	88	66.531	ENSGGOG00000004583	TRUB1	70	66.531	Gorilla_gorilla
ENSPMGG00000000075	trub1	93	78.113	ENSHBUG00000016787	trub1	95	78.113	Haplochromis_burtoni
ENSPMGG00000000075	trub1	88	64.490	ENSHGLG00000015314	TRUB1	70	64.490	Heterocephalus_glaber_female
ENSPMGG00000000075	trub1	66	63.934	ENSHGLG00100009183	TRUB1	77	63.934	Heterocephalus_glaber_male
ENSPMGG00000000075	trub1	91	78.346	ENSHCOG00000017877	trub1	96	75.849	Hippocampus_comes
ENSPMGG00000000075	trub1	97	69.373	ENSIPUG00000017559	trub1	94	69.373	Ictalurus_punctatus
ENSPMGG00000000075	trub1	84	67.660	ENSSTOG00000003641	TRUB1	71	67.660	Ictidomys_tridecemlineatus
ENSPMGG00000000075	trub1	88	66.122	ENSJJAG00000011800	Trub1	72	66.122	Jaculus_jaculus
ENSPMGG00000000075	trub1	94	79.699	ENSKMAG00000006232	trub1	96	79.699	Kryptolebias_marmoratus
ENSPMGG00000000075	trub1	92	77.778	ENSLBEG00000026722	trub1	91	77.778	Labrus_bergylta
ENSPMGG00000000075	trub1	91	66.537	ENSLACG00000014885	TRUB1	86	66.537	Latimeria_chalumnae
ENSPMGG00000000075	trub1	98	67.148	ENSLOCG00000012979	trub1	94	67.148	Lepisosteus_oculatus
ENSPMGG00000000075	trub1	88	66.531	ENSLAFG00000015452	TRUB1	70	66.531	Loxodonta_africana
ENSPMGG00000000075	trub1	88	66.122	ENSMFAG00000031767	TRUB1	70	66.122	Macaca_fascicularis
ENSPMGG00000000075	trub1	88	66.122	ENSMMUG00000001902	TRUB1	70	66.122	Macaca_mulatta
ENSPMGG00000000075	trub1	88	60.816	ENSMNEG00000044646	TRUB1	69	61.224	Macaca_nemestrina
ENSPMGG00000000075	trub1	88	66.122	ENSMLEG00000042655	TRUB1	70	66.122	Mandrillus_leucophaeus
ENSPMGG00000000075	trub1	93	77.736	ENSMZEG00005024095	trub1	95	77.736	Maylandia_zebra
ENSPMGG00000000075	trub1	91	65.217	ENSMGAG00000011135	TRUB1	87	65.217	Meleagris_gallopavo
ENSPMGG00000000075	trub1	86	65.126	ENSMAUG00000011101	Trub1	72	64.082	Mesocricetus_auratus
ENSPMGG00000000075	trub1	88	66.122	ENSMICG00000016324	TRUB1	70	66.122	Microcebus_murinus
ENSPMGG00000000075	trub1	86	66.946	ENSMOCG00000017759	Trub1	74	65.854	Microtus_ochrogaster
ENSPMGG00000000075	trub1	96	60.440	ENSMODG00000009676	TRUB1	70	63.780	Monodelphis_domestica
ENSPMGG00000000075	trub1	87	65.560	MGP_CAROLIEiJ_G0023100	Trub1	76	64.171	Mus_caroli
ENSPMGG00000000075	trub1	87	64.730	ENSMUSG00000025086	Trub1	76	63.102	Mus_musculus
ENSPMGG00000000075	trub1	88	64.082	MGP_PahariEiJ_G0014588	Trub1	72	64.082	Mus_pahari
ENSPMGG00000000075	trub1	87	64.730	MGP_SPRETEiJ_G0024021	Trub1	76	63.102	Mus_spretus
ENSPMGG00000000075	trub1	88	65.714	ENSMPUG00000003556	TRUB1	70	65.714	Mustela_putorius_furo
ENSPMGG00000000075	trub1	96	61.194	ENSMLUG00000017686	TRUB1	72	65.306	Myotis_lucifugus
ENSPMGG00000000075	trub1	88	65.714	ENSNGAG00000018682	Trub1	70	65.714	Nannospalax_galili
ENSPMGG00000000075	trub1	93	79.070	ENSNBRG00000023393	trub1	93	78.764	Neolamprologus_brichardi
ENSPMGG00000000075	trub1	88	66.531	ENSNLEG00000016345	TRUB1	70	66.531	Nomascus_leucogenys
ENSPMGG00000000075	trub1	73	66.667	ENSMEUG00000006603	TRUB1	78	64.455	Notamacropus_eugenii
ENSPMGG00000000075	trub1	91	64.567	ENSOPRG00000009371	TRUB1	74	64.567	Ochotona_princeps
ENSPMGG00000000075	trub1	91	63.241	ENSODEG00000010854	TRUB1	72	63.241	Octodon_degus
ENSPMGG00000000075	trub1	94	78.195	ENSONIG00000007249	trub1	97	78.195	Oreochromis_niloticus
ENSPMGG00000000075	trub1	89	64.777	ENSOANG00000001556	TRUB1	83	64.427	Ornithorhynchus_anatinus
ENSPMGG00000000075	trub1	88	64.490	ENSOCUG00000009456	TRUB1	71	64.490	Oryctolagus_cuniculus
ENSPMGG00000000075	trub1	98	73.118	ENSORLG00000029719	trub1	100	73.477	Oryzias_latipes
ENSPMGG00000000075	trub1	98	73.118	ENSORLG00020016767	trub1	99	73.477	Oryzias_latipes_hni
ENSPMGG00000000075	trub1	98	73.118	ENSORLG00015014728	trub1	100	73.477	Oryzias_latipes_hsok
ENSPMGG00000000075	trub1	99	73.571	ENSOMEG00000014556	trub1	97	73.571	Oryzias_melastigma
ENSPMGG00000000075	trub1	88	66.122	ENSOGAG00000015895	TRUB1	70	66.122	Otolemur_garnettii
ENSPMGG00000000075	trub1	88	63.889	ENSOARG00000015591	TRUB1	72	63.889	Ovis_aries
ENSPMGG00000000075	trub1	88	66.531	ENSPPAG00000043645	TRUB1	70	66.531	Pan_paniscus
ENSPMGG00000000075	trub1	88	65.714	ENSPPRG00000007096	TRUB1	70	65.714	Panthera_pardus
ENSPMGG00000000075	trub1	88	65.714	ENSPTIG00000006378	TRUB1	70	65.714	Panthera_tigris_altaica
ENSPMGG00000000075	trub1	88	66.531	ENSPTRG00000002964	TRUB1	70	66.531	Pan_troglodytes
ENSPMGG00000000075	trub1	88	66.122	ENSPANG00000020712	TRUB1	70	66.122	Papio_anubis
ENSPMGG00000000075	trub1	62	76.023	ENSPKIG00000003852	trub1	74	76.023	Paramormyrops_kingsleyae
ENSPMGG00000000075	trub1	96	62.409	ENSPSIG00000012877	TRUB1	94	62.409	Pelodiscus_sinensis
ENSPMGG00000000075	trub1	88	66.531	ENSPEMG00000011156	Trub1	72	66.531	Peromyscus_maniculatus_bairdii
ENSPMGG00000000075	trub1	96	60.219	ENSPCIG00000009729	TRUB1	77	58.803	Phascolarctos_cinereus
ENSPMGG00000000075	trub1	92	77.255	ENSPFOG00000009950	trub1	93	77.255	Poecilia_formosa
ENSPMGG00000000075	trub1	94	75.655	ENSPLAG00000013855	trub1	94	75.655	Poecilia_latipinna
ENSPMGG00000000075	trub1	94	75.655	ENSPMEG00000009064	trub1	96	75.655	Poecilia_mexicana
ENSPMGG00000000075	trub1	94	74.906	ENSPREG00000003343	trub1	96	74.906	Poecilia_reticulata
ENSPMGG00000000075	trub1	88	66.122	ENSPPYG00000002676	TRUB1	70	66.122	Pongo_abelii
ENSPMGG00000000075	trub1	91	58.661	ENSPCAG00000008427	TRUB1	72	58.661	Procavia_capensis
ENSPMGG00000000075	trub1	88	60.816	ENSPCOG00000024360	TRUB1	68	60.000	Propithecus_coquereli
ENSPMGG00000000075	trub1	73	66.337	ENSPVAG00000007575	TRUB1	77	66.337	Pteropus_vampyrus
ENSPMGG00000000075	trub1	93	77.358	ENSPNYG00000018614	trub1	95	77.358	Pundamilia_nyererei
ENSPMGG00000000075	trub1	91	63.492	ENSPNAG00000006881	trub1	81	62.698	Pygocentrus_nattereri
ENSPMGG00000000075	trub1	95	60.526	ENSRNOG00000017321	Trub1	78	60.526	Rattus_norvegicus
ENSPMGG00000000075	trub1	88	58.776	ENSRBIG00000033423	TRUB1	68	58.776	Rhinopithecus_bieti
ENSPMGG00000000075	trub1	88	66.122	ENSRROG00000033902	TRUB1	70	66.122	Rhinopithecus_roxellana
ENSPMGG00000000075	trub1	88	66.122	ENSSBOG00000024237	TRUB1	70	66.122	Saimiri_boliviensis_boliviensis
ENSPMGG00000000075	trub1	85	60.408	ENSSHAG00000009346	TRUB1	82	60.408	Sarcophilus_harrisii
ENSPMGG00000000075	trub1	89	75.806	ENSSFOG00015022124	trub1	85	75.806	Scleropages_formosus
ENSPMGG00000000075	trub1	96	77.656	ENSSMAG00000001020	trub1	97	77.656	Scophthalmus_maximus
ENSPMGG00000000075	trub1	96	77.256	ENSSDUG00000016414	trub1	99	77.617	Seriola_dumerili
ENSPMGG00000000075	trub1	94	79.323	ENSSLDG00000015486	trub1	96	79.699	Seriola_lalandi_dorsalis
ENSPMGG00000000075	trub1	92	64.639	ENSSPUG00000001642	TRUB1	90	64.639	Sphenodon_punctatus
ENSPMGG00000000075	trub1	96	77.617	ENSSPAG00000001217	trub1	99	77.617	Stegastes_partitus
ENSPMGG00000000075	trub1	88	65.714	ENSSSCG00000010653	TRUB1	71	65.714	Sus_scrofa
ENSPMGG00000000075	trub1	88	66.803	ENSTGUG00000010971	TRUB1	87	66.803	Taeniopygia_guttata
ENSPMGG00000000075	trub1	76	56.667	ENSTBEG00000002880	TRUB1	83	56.667	Tupaia_belangeri
ENSPMGG00000000075	trub1	73	65.842	ENSTTRG00000005767	TRUB1	77	65.842	Tursiops_truncatus
ENSPMGG00000000075	trub1	88	65.714	ENSUAMG00000024876	TRUB1	70	65.714	Ursus_americanus
ENSPMGG00000000075	trub1	88	65.714	ENSUMAG00000002411	TRUB1	76	64.314	Ursus_maritimus
ENSPMGG00000000075	trub1	88	65.714	ENSVPAG00000005507	TRUB1	70	65.714	Vicugna_pacos
ENSPMGG00000000075	trub1	88	65.714	ENSVVUG00000010085	TRUB1	59	65.714	Vulpes_vulpes
ENSPMGG00000000075	trub1	90	65.462	ENSXETG00000023828	trub1	90	65.462	Xenopus_tropicalis
ENSPMGG00000000075	trub1	87	78.512	ENSXCOG00000017847	trub1	86	78.512	Xiphophorus_couchianus
ENSPMGG00000000075	trub1	94	75.849	ENSXMAG00000014701	trub1	96	75.849	Xiphophorus_maculatus