EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMGG00000000218 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Periophthalmus_magnuspinnatus
Status: putative
Strand: Plus strand
Length: 9014 bases
Position: chrJACL01041106.1:168-9181
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMGP00000000208	zf-C2H2	PF00096.26	1.2e-38	1	7
ENSPMGP00000000208	zf-C2H2	PF00096.26	1.2e-38	2	7
ENSPMGP00000000208	zf-C2H2	PF00096.26	1.2e-38	3	7
ENSPMGP00000000208	zf-C2H2	PF00096.26	1.2e-38	4	7
ENSPMGP00000000208	zf-C2H2	PF00096.26	1.2e-38	5	7
ENSPMGP00000000208	zf-C2H2	PF00096.26	1.2e-38	6	7
ENSPMGP00000000208	zf-C2H2	PF00096.26	1.2e-38	7	7
ENSPMGP00000000208	zf-met	PF12874.7	1.3e-18	1	4
ENSPMGP00000000208	zf-met	PF12874.7	1.3e-18	2	4
ENSPMGP00000000208	zf-met	PF12874.7	1.3e-18	3	4
ENSPMGP00000000208	zf-met	PF12874.7	1.3e-18	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMGT00000000222	-	1329	-	ENSPMGP00000000208	442 (aa)	-	-

Gene Model

Click here to download ENSPMGG00000000218's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMGG00000000218's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMGG00000000218	-	68	43.636	ENSACIG00000017166	-	92	44.000	Amphilophus_citrinellus
ENSPMGG00000000218	-	60	38.667	ENSAOCG00000018579	-	72	38.667	Amphiprion_ocellaris
ENSPMGG00000000218	-	58	36.449	ENSAPEG00000007910	-	52	31.765	Amphiprion_percula
ENSPMGG00000000218	-	67	40.602	ENSAPEG00000007889	-	74	33.080	Amphiprion_percula
ENSPMGG00000000218	-	59	35.028	ENSAPEG00000019755	-	86	35.028	Amphiprion_percula
ENSPMGG00000000218	-	59	35.156	WBGene00021374	Y37E11B.1	90	33.036	Caenorhabditis_elegans
ENSPMGG00000000218	-	60	31.955	ENSCING00000005713	-	69	32.031	Ciona_intestinalis
ENSPMGG00000000218	-	60	33.086	ENSCING00000004861	zf(c2h2)-12	82	33.846	Ciona_intestinalis
ENSPMGG00000000218	-	62	31.606	ENSCING00000000529	zf(btb/c2h2)	55	42.857	Ciona_intestinalis
ENSPMGG00000000218	-	63	41.818	ENSCSAVG00000003895	-	100	41.818	Ciona_savignyi
ENSPMGG00000000218	-	75	33.071	ENSCSAVG00000006729	-	80	33.333	Ciona_savignyi
ENSPMGG00000000218	-	62	36.957	ENSCSAVG00000009574	-	99	35.915	Ciona_savignyi
ENSPMGG00000000218	-	61	32.886	ENSCSAVG00000005896	-	63	32.331	Ciona_savignyi
ENSPMGG00000000218	-	76	34.783	ENSCSEG00000005491	-	87	33.333	Cynoglossus_semilaevis
ENSPMGG00000000218	-	57	41.573	ENSCVAG00000002502	-	92	41.573	Cyprinodon_variegatus
ENSPMGG00000000218	-	58	41.026	ENSCVAG00000016098	-	98	41.045	Cyprinodon_variegatus
ENSPMGG00000000218	-	70	39.073	ENSCVAG00000002295	-	79	39.764	Cyprinodon_variegatus
ENSPMGG00000000218	-	61	33.784	FBgn0028895	CG17328	51	32.778	Drosophila_melanogaster
ENSPMGG00000000218	-	67	35.088	FBgn0030012	CG18262	54	35.088	Drosophila_melanogaster
ENSPMGG00000000218	-	62	37.195	FBgn0037722	CG8319	59	37.195	Drosophila_melanogaster
ENSPMGG00000000218	-	60	37.681	FBgn0033934	CG17385	63	37.681	Drosophila_melanogaster
ENSPMGG00000000218	-	60	44.970	ENSEBUG00000015522	-	67	44.314	Eptatretus_burgeri
ENSPMGG00000000218	-	65	41.126	ENSEBUG00000004841	-	81	41.126	Eptatretus_burgeri
ENSPMGG00000000218	-	76	45.000	ENSEBUG00000008392	-	74	42.353	Eptatretus_burgeri
ENSPMGG00000000218	-	60	43.462	ENSEBUG00000000735	-	98	43.529	Eptatretus_burgeri
ENSPMGG00000000218	-	66	35.349	ENSELUG00000020794	-	64	35.821	Esox_lucius
ENSPMGG00000000218	-	61	34.884	ENSFHEG00000020889	-	85	38.889	Fundulus_heteroclitus
ENSPMGG00000000218	-	64	41.667	ENSFHEG00000003596	-	73	41.772	Fundulus_heteroclitus
ENSPMGG00000000218	-	88	44.882	ENSFHEG00000013644	-	94	44.882	Fundulus_heteroclitus
ENSPMGG00000000218	-	73	39.844	ENSFHEG00000007344	-	61	33.654	Fundulus_heteroclitus
ENSPMGG00000000218	-	60	34.848	ENSFHEG00000012990	-	94	34.848	Fundulus_heteroclitus
ENSPMGG00000000218	-	59	41.718	ENSGACG00000018415	-	99	42.038	Gasterosteus_aculeatus
ENSPMGG00000000218	-	60	39.552	ENSHCOG00000017437	-	70	39.623	Hippocampus_comes
ENSPMGG00000000218	-	62	34.444	ENSHCOG00000008181	-	68	38.095	Hippocampus_comes
ENSPMGG00000000218	-	60	37.805	ENSHCOG00000014887	-	76	34.783	Hippocampus_comes
ENSPMGG00000000218	-	61	41.667	ENSHCOG00000014881	-	70	40.559	Hippocampus_comes
ENSPMGG00000000218	-	60	34.302	ENSHCOG00000001313	-	60	34.404	Hippocampus_comes
ENSPMGG00000000218	-	60	39.815	ENSIPUG00000013526	-	72	39.216	Ictalurus_punctatus
ENSPMGG00000000218	-	63	38.849	ENSKMAG00000012909	-	88	36.508	Kryptolebias_marmoratus
ENSPMGG00000000218	-	58	33.684	ENSKMAG00000007658	-	87	34.035	Kryptolebias_marmoratus
ENSPMGG00000000218	-	50	36.842	ENSMMOG00000001961	-	96	36.620	Mola_mola
ENSPMGG00000000218	-	89	41.026	ENSMALG00000000650	-	73	41.026	Monopterus_albus
ENSPMGG00000000218	-	57	31.343	ENSMALG00000013521	-	66	31.343	Monopterus_albus
ENSPMGG00000000218	-	59	38.318	ENSONIG00000009894	-	99	38.318	Oreochromis_niloticus
ENSPMGG00000000218	-	61	42.857	ENSONIG00000003471	-	100	42.857	Oreochromis_niloticus
ENSPMGG00000000218	-	59	37.500	ENSONIG00000003224	-	93	37.500	Oreochromis_niloticus
ENSPMGG00000000218	-	81	43.103	ENSONIG00000007812	-	100	42.023	Oreochromis_niloticus
ENSPMGG00000000218	-	60	37.857	ENSONIG00000016416	-	97	37.423	Oreochromis_niloticus
ENSPMGG00000000218	-	60	31.304	ENSORLG00015018254	-	90	44.231	Oryzias_latipes_hsok
ENSPMGG00000000218	-	70	37.430	ENSOMEG00000017673	-	68	40.385	Oryzias_melastigma
ENSPMGG00000000218	-	90	36.952	ENSPMGG00000000243	-	93	52.000	Periophthalmus_magnuspinnatus
ENSPMGG00000000218	-	87	41.964	ENSPMGG00000022524	-	96	42.056	Periophthalmus_magnuspinnatus
ENSPMGG00000000218	-	89	34.783	ENSPMGG00000000458	-	90	47.879	Periophthalmus_magnuspinnatus
ENSPMGG00000000218	-	59	32.751	ENSPMGG00000012289	-	71	32.751	Periophthalmus_magnuspinnatus
ENSPMGG00000000218	-	61	40.351	ENSPMGG00000019842	-	74	40.491	Periophthalmus_magnuspinnatus
ENSPMGG00000000218	-	59	52.482	ENSPMGG00000000489	-	74	48.148	Periophthalmus_magnuspinnatus
ENSPMGG00000000218	-	65	46.512	ENSPMGG00000010664	-	91	46.512	Periophthalmus_magnuspinnatus
ENSPMGG00000000218	-	75	34.028	ENSPMGG00000010563	-	80	34.028	Periophthalmus_magnuspinnatus
ENSPMGG00000000218	-	61	40.000	ENSPMAG00000007983	-	99	40.000	Petromyzon_marinus
ENSPMGG00000000218	-	59	42.748	ENSPFOG00000020691	-	82	33.663	Poecilia_formosa
ENSPMGG00000000218	-	60	41.923	ENSPFOG00000002879	-	99	41.961	Poecilia_formosa
ENSPMGG00000000218	-	74	37.363	ENSPLAG00000011254	-	82	39.024	Poecilia_latipinna
ENSPMGG00000000218	-	82	38.846	ENSPLAG00000006174	-	93	39.669	Poecilia_latipinna
ENSPMGG00000000218	-	62	37.363	ENSPMEG00000007503	-	57	39.024	Poecilia_mexicana
ENSPMGG00000000218	-	61	39.552	ENSPMEG00000019229	-	66	39.552	Poecilia_mexicana
ENSPMGG00000000218	-	60	43.882	ENSPMEG00000022676	-	99	43.882	Poecilia_mexicana
ENSPMGG00000000218	-	62	37.413	ENSPREG00000016204	-	63	38.462	Poecilia_reticulata
ENSPMGG00000000218	-	78	39.024	ENSPREG00000015352	-	88	39.024	Poecilia_reticulata
ENSPMGG00000000218	-	62	40.299	ENSPREG00000007146	-	66	40.299	Poecilia_reticulata
ENSPMGG00000000218	-	69	30.000	ENSPNAG00000025211	-	73	30.165	Pygocentrus_nattereri
ENSPMGG00000000218	-	61	38.323	ENSSMAG00000000404	-	68	38.318	Scophthalmus_maximus
ENSPMGG00000000218	-	58	35.227	ENSSMAG00000001359	-	87	30.588	Scophthalmus_maximus
ENSPMGG00000000218	-	74	46.512	ENSSDUG00000000946	-	99	43.396	Seriola_dumerili
ENSPMGG00000000218	-	68	34.959	ENSSDUG00000000871	-	59	34.959	Seriola_dumerili
ENSPMGG00000000218	-	77	36.129	ENSSLDG00000002515	-	86	36.129	Seriola_lalandi_dorsalis
ENSPMGG00000000218	-	57	32.584	ENSSLDG00000000464	-	54	32.584	Seriola_lalandi_dorsalis
ENSPMGG00000000218	-	58	33.673	ENSSLDG00000015796	-	72	33.333	Seriola_lalandi_dorsalis
ENSPMGG00000000218	-	58	33.333	ENSTRUG00000019941	-	59	34.118	Takifugu_rubripes
ENSPMGG00000000218	-	59	38.053	ENSTNIG00000008154	-	99	38.318	Tetraodon_nigroviridis
ENSPMGG00000000218	-	71	31.034	ENSXCOG00000005697	-	95	30.058	Xiphophorus_couchianus
ENSPMGG00000000218	-	62	38.462	ENSXMAG00000022242	-	71	40.244	Xiphophorus_maculatus