EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMGG00000000243 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Periophthalmus_magnuspinnatus
Status: putative
Strand: Plus strand
Length: 6206 bases
Position: chrJACL01041106.1:12385-18590
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMGP00000000431	zf-C2H2	PF00096.26	6.3e-38	1	7
ENSPMGP00000000431	zf-C2H2	PF00096.26	6.3e-38	2	7
ENSPMGP00000000431	zf-C2H2	PF00096.26	6.3e-38	3	7
ENSPMGP00000000431	zf-C2H2	PF00096.26	6.3e-38	4	7
ENSPMGP00000000431	zf-C2H2	PF00096.26	6.3e-38	5	7
ENSPMGP00000000431	zf-C2H2	PF00096.26	6.3e-38	6	7
ENSPMGP00000000431	zf-C2H2	PF00096.26	6.3e-38	7	7
ENSPMGP00000000223	zf-C2H2	PF00096.26	5.9e-37	1	8
ENSPMGP00000000223	zf-C2H2	PF00096.26	5.9e-37	2	8
ENSPMGP00000000223	zf-C2H2	PF00096.26	5.9e-37	3	8
ENSPMGP00000000223	zf-C2H2	PF00096.26	5.9e-37	4	8
ENSPMGP00000000223	zf-C2H2	PF00096.26	5.9e-37	5	8
ENSPMGP00000000223	zf-C2H2	PF00096.26	5.9e-37	6	8
ENSPMGP00000000223	zf-C2H2	PF00096.26	5.9e-37	7	8
ENSPMGP00000000223	zf-C2H2	PF00096.26	5.9e-37	8	8
ENSPMGP00000000279	zf-C2H2	PF00096.26	1.1e-33	1	7
ENSPMGP00000000279	zf-C2H2	PF00096.26	1.1e-33	2	7
ENSPMGP00000000279	zf-C2H2	PF00096.26	1.1e-33	3	7
ENSPMGP00000000279	zf-C2H2	PF00096.26	1.1e-33	4	7
ENSPMGP00000000279	zf-C2H2	PF00096.26	1.1e-33	5	7
ENSPMGP00000000279	zf-C2H2	PF00096.26	1.1e-33	6	7
ENSPMGP00000000279	zf-C2H2	PF00096.26	1.1e-33	7	7
ENSPMGP00000000223	zf-met	PF12874.7	7e-08	1	2
ENSPMGP00000000223	zf-met	PF12874.7	7e-08	2	2
ENSPMGP00000000279	zf-met	PF12874.7	4.7e-05	1	2
ENSPMGP00000000279	zf-met	PF12874.7	4.7e-05	2	2
ENSPMGP00000000431	zf-met	PF12874.7	0.00013	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMGT00000000452	-	1266	-	ENSPMGP00000000431	421 (aa)	-	-
ENSPMGT00000000237	-	1215	-	ENSPMGP00000000223	404 (aa)	-	-
ENSPMGT00000000294	-	867	-	ENSPMGP00000000279	288 (aa)	-	-

Gene Model

Click here to download ENSPMGG00000000243's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMGG00000000243's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMGG00000000243	-	81	37.241	ENSACIG00000017166	-	92	40.244	Amphilophus_citrinellus
ENSPMGG00000000243	-	73	35.616	ENSAOCG00000018579	-	89	35.849	Amphiprion_ocellaris
ENSPMGG00000000243	-	71	41.558	ENSAPEG00000019755	-	98	32.973	Amphiprion_percula
ENSPMGG00000000243	-	78	40.698	ENSAPEG00000007889	-	84	32.847	Amphiprion_percula
ENSPMGG00000000243	-	76	38.144	ENSAMXG00000032845	-	50	35.398	Astyanax_mexicanus
ENSPMGG00000000243	-	72	33.913	WBGene00021374	Y37E11B.1	90	34.000	Caenorhabditis_elegans
ENSPMGG00000000243	-	76	33.036	ENSCING00000005713	-	73	33.036	Ciona_intestinalis
ENSPMGG00000000243	-	88	34.653	ENSCING00000004861	zf(c2h2)-12	79	34.653	Ciona_intestinalis
ENSPMGG00000000243	-	89	32.468	ENSCING00000000529	zf(btb/c2h2)	58	38.636	Ciona_intestinalis
ENSPMGG00000000243	-	74	31.818	ENSCING00000003384	-	98	31.818	Ciona_intestinalis
ENSPMGG00000000243	-	77	30.288	ENSCSAVG00000006729	-	69	34.000	Ciona_savignyi
ENSPMGG00000000243	-	86	33.498	ENSCSAVG00000005896	-	77	35.043	Ciona_savignyi
ENSPMGG00000000243	-	67	37.037	ENSCSAVG00000003895	-	100	38.983	Ciona_savignyi
ENSPMGG00000000243	-	87	33.101	ENSCSAVG00000009574	-	99	37.443	Ciona_savignyi
ENSPMGG00000000243	-	96	37.963	ENSCSEG00000005491	-	89	32.787	Cynoglossus_semilaevis
ENSPMGG00000000243	-	79	36.207	ENSCVAG00000016098	-	97	37.931	Cyprinodon_variegatus
ENSPMGG00000000243	-	99	45.000	ENSCVAG00000002295	-	96	36.923	Cyprinodon_variegatus
ENSPMGG00000000243	-	67	41.379	ENSCVAG00000019574	-	78	50.000	Cyprinodon_variegatus
ENSPMGG00000000243	-	70	47.143	ENSCVAG00000002502	-	98	47.143	Cyprinodon_variegatus
ENSPMGG00000000243	-	76	33.898	FBgn0030012	CG18262	62	32.301	Drosophila_melanogaster
ENSPMGG00000000243	-	76	43.478	FBgn0033934	CG17385	76	40.559	Drosophila_melanogaster
ENSPMGG00000000243	-	78	32.716	FBgn0040366	CG11398	65	34.783	Drosophila_melanogaster
ENSPMGG00000000243	-	78	42.683	FBgn0028895	CG17328	50	42.683	Drosophila_melanogaster
ENSPMGG00000000243	-	81	34.637	FBgn0037722	CG8319	77	32.218	Drosophila_melanogaster
ENSPMGG00000000243	-	89	39.209	ENSEBUG00000015522	-	67	44.608	Eptatretus_burgeri
ENSPMGG00000000243	-	76	47.541	ENSEBUG00000008392	-	70	47.541	Eptatretus_burgeri
ENSPMGG00000000243	-	87	35.185	ENSEBUG00000004841	-	89	42.029	Eptatretus_burgeri
ENSPMGG00000000243	-	88	39.928	ENSEBUG00000000735	-	98	41.546	Eptatretus_burgeri
ENSPMGG00000000243	-	96	34.307	ENSELUG00000020794	-	74	34.602	Esox_lucius
ENSPMGG00000000243	-	77	38.462	ENSFHEG00000020889	-	85	34.054	Fundulus_heteroclitus
ENSPMGG00000000243	-	99	43.333	ENSFHEG00000013644	-	91	44.022	Fundulus_heteroclitus
ENSPMGG00000000243	-	73	39.560	ENSFHEG00000003596	-	75	34.074	Fundulus_heteroclitus
ENSPMGG00000000243	-	93	31.790	ENSFHEG00000012990	-	97	38.983	Fundulus_heteroclitus
ENSPMGG00000000243	-	87	33.922	ENSFHEG00000007344	-	53	39.175	Fundulus_heteroclitus
ENSPMGG00000000243	-	88	36.932	ENSGACG00000018415	-	99	37.805	Gasterosteus_aculeatus
ENSPMGG00000000243	-	84	40.196	ENSHCOG00000017437	-	91	31.566	Hippocampus_comes
ENSPMGG00000000243	-	93	44.186	ENSHCOG00000014881	-	81	38.743	Hippocampus_comes
ENSPMGG00000000243	-	80	34.021	ENSHCOG00000014887	-	63	34.021	Hippocampus_comes
ENSPMGG00000000243	-	91	45.133	ENSHCOG00000008181	-	75	45.133	Hippocampus_comes
ENSPMGG00000000243	-	95	35.976	ENSHCOG00000014891	-	64	35.976	Hippocampus_comes
ENSPMGG00000000243	-	78	42.742	ENSHCOG00000001313	-	60	34.574	Hippocampus_comes
ENSPMGG00000000243	-	77	39.080	ENSIPUG00000013526	-	85	31.222	Ictalurus_punctatus
ENSPMGG00000000243	-	77	40.196	ENSKMAG00000007658	-	87	41.573	Kryptolebias_marmoratus
ENSPMGG00000000243	-	73	41.667	ENSKMAG00000012909	-	86	41.667	Kryptolebias_marmoratus
ENSPMGG00000000243	-	75	32.174	ENSLBEG00000026573	-	69	32.174	Labrus_bergylta
ENSPMGG00000000243	-	70	30.675	ENSMAMG00000023631	-	52	30.675	Mastacembelus_armatus
ENSPMGG00000000243	-	74	36.842	ENSMMOG00000001961	-	96	36.047	Mola_mola
ENSPMGG00000000243	-	93	31.193	ENSONIG00000016416	-	99	38.073	Oreochromis_niloticus
ENSPMGG00000000243	-	80	45.545	ENSONIG00000007812	-	99	45.545	Oreochromis_niloticus
ENSPMGG00000000243	-	83	40.909	ENSONIG00000003471	-	99	40.909	Oreochromis_niloticus
ENSPMGG00000000243	-	76	40.426	ENSONIG00000009894	-	94	40.426	Oreochromis_niloticus
ENSPMGG00000000243	-	87	36.898	ENSONIG00000003224	-	99	35.294	Oreochromis_niloticus
ENSPMGG00000000243	-	77	38.532	ENSORLG00015018254	-	93	38.532	Oryzias_latipes_hsok
ENSPMGG00000000243	-	76	40.367	ENSOMEG00000017673	-	69	40.367	Oryzias_melastigma
ENSPMGG00000000243	-	74	36.923	ENSPMGG00000012289	-	70	43.103	Periophthalmus_magnuspinnatus
ENSPMGG00000000243	-	94	44.809	ENSPMGG00000010664	-	91	44.809	Periophthalmus_magnuspinnatus
ENSPMGG00000000243	-	93	31.818	ENSPMGG00000010563	-	81	40.678	Periophthalmus_magnuspinnatus
ENSPMGG00000000243	-	90	46.154	ENSPMGG00000000489	-	94	46.154	Periophthalmus_magnuspinnatus
ENSPMGG00000000243	-	99	40.704	ENSPMGG00000022524	-	98	44.022	Periophthalmus_magnuspinnatus
ENSPMGG00000000243	-	94	53.901	ENSPMGG00000000458	-	94	52.817	Periophthalmus_magnuspinnatus
ENSPMGG00000000243	-	81	36.196	ENSPMGG00000019842	-	68	40.678	Periophthalmus_magnuspinnatus
ENSPMGG00000000243	-	93	52.000	ENSPMGG00000000218	-	90	36.952	Periophthalmus_magnuspinnatus
ENSPMGG00000000243	-	81	41.611	ENSPMAG00000007983	-	99	41.611	Petromyzon_marinus
ENSPMGG00000000243	-	97	44.335	ENSPFOG00000002879	-	100	44.335	Poecilia_formosa
ENSPMGG00000000243	-	96	40.146	ENSPFOG00000020691	-	97	39.073	Poecilia_formosa
ENSPMGG00000000243	-	76	42.105	ENSPLAG00000011254	-	58	43.750	Poecilia_latipinna
ENSPMGG00000000243	-	92	42.233	ENSPLAG00000006174	-	86	45.122	Poecilia_latipinna
ENSPMGG00000000243	-	79	47.222	ENSPMEG00000022676	-	99	47.222	Poecilia_mexicana
ENSPMGG00000000243	-	76	41.053	ENSPMEG00000007503	-	60	44.615	Poecilia_mexicana
ENSPMGG00000000243	-	88	38.286	ENSPMEG00000019229	-	73	38.286	Poecilia_mexicana
ENSPMGG00000000243	-	91	34.615	ENSPMEG00000021927	-	64	34.615	Poecilia_mexicana
ENSPMGG00000000243	-	84	48.810	ENSPREG00000016204	-	76	48.810	Poecilia_reticulata
ENSPMGG00000000243	-	84	37.714	ENSPREG00000007146	-	67	37.714	Poecilia_reticulata
ENSPMGG00000000243	-	88	33.537	ENSPREG00000015352	-	87	34.815	Poecilia_reticulata
ENSPMGG00000000243	-	76	30.714	ENSSMAG00000001359	-	88	30.714	Scophthalmus_maximus
ENSPMGG00000000243	-	75	40.217	ENSSMAG00000000404	-	85	40.217	Scophthalmus_maximus
ENSPMGG00000000243	-	94	54.023	ENSSDUG00000000946	-	95	54.023	Seriola_dumerili
ENSPMGG00000000243	-	71	47.917	ENSSDUG00000000871	-	92	47.917	Seriola_dumerili
ENSPMGG00000000243	-	72	30.370	ENSSLDG00000015796	-	75	30.370	Seriola_lalandi_dorsalis
ENSPMGG00000000243	-	75	33.884	ENSSLDG00000000464	-	60	34.821	Seriola_lalandi_dorsalis
ENSPMGG00000000243	-	85	38.462	ENSSLDG00000002515	-	92	38.462	Seriola_lalandi_dorsalis
ENSPMGG00000000243	-	81	31.481	ENSSPAG00000009405	-	57	31.606	Stegastes_partitus
ENSPMGG00000000243	-	87	34.783	ENSTNIG00000008154	-	99	34.783	Tetraodon_nigroviridis
ENSPMGG00000000243	-	75	44.681	ENSXCOG00000005697	-	99	41.935	Xiphophorus_couchianus
ENSPMGG00000000243	-	73	35.393	ENSXMAG00000022242	-	74	42.105	Xiphophorus_maculatus