EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSPMGG00000000543 (Gene tree)
Gene ID
-
Gene Symbol
RPA1 (1 of many)
Alias
-
Full Name
replication protein A1
Gene Type
protein_coding
Species
Periophthalmus_magnuspinnatus
Status
putative
Strand
Plus strand
Length
54220 bases
Position
chrKN462446.1:81183-135402
Accession
10289
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSPMGP00000000643tRNA_anti-codonPF01336.254.8e-1211
ENSPMGP00000000638tRNA_anti-codonPF01336.255.3e-1211
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSPMGT00000000668RPA1 (1 of many)-2011764-ENSPMGP00000000638587 (aa)--
ENSPMGT00000000675RPA1 (1 of many)-2021668-ENSPMGP00000000643555 (aa)--
Gene Model
Click here to download ENSPMGG00000000543's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSPMGG00000000543's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSPMGG00000000543RPA19961.111ENSAPOG00000011658rpa19960.784Acanthochromis_polyacanthus
ENSPMGG00000000543RPA19979.418ENSAPOG00000019409RPA19279.418Acanthochromis_polyacanthus
ENSPMGG00000000543RPA19955.986ENSAMEG00000007706RPA19454.983Ailuropoda_melanoleuca
ENSPMGG00000000543RPA19955.296ENSACIG00000007277rpa19954.059Amphilophus_citrinellus
ENSPMGG00000000543RPA19971.880ENSACIG00000012881RPA19771.880Amphilophus_citrinellus
ENSPMGG00000000543RPA19961.111ENSAOCG00000023376rpa19960.250Amphiprion_ocellaris
ENSPMGG00000000543RPA19969.702ENSAOCG00000009003RPA110066.667Amphiprion_ocellaris
ENSPMGG00000000543RPA19968.336ENSAPEG00000019132RPA110065.476Amphiprion_percula
ENSPMGG00000000543RPA19960.932ENSAPEG00000008634rpa19960.142Amphiprion_percula
ENSPMGG00000000543RPA19961.511ENSATEG00000022024rpa19960.885Anabas_testudineus
ENSPMGG00000000543RPA19968.914ENSATEG00000006443RPA110065.554Anabas_testudineus
ENSPMGG00000000543RPA19947.981ENSAPLG00000012442RPA19647.699Anas_platyrhynchos
ENSPMGG00000000543RPA19953.240ENSACAG00000014490RPA19953.038Anolis_carolinensis
ENSPMGG00000000543RPA19956.703ENSANAG00000023456RPA19558.029Aotus_nancymaae
ENSPMGG00000000543RPA19970.805ENSACLG00000005223RPA19965.635Astatotilapia_calliptera
ENSPMGG00000000543RPA19962.230ENSACLG00000006640rpa19962.545Astatotilapia_calliptera
ENSPMGG00000000543RPA19962.433ENSAMXG00000008418rpa19962.837Astyanax_mexicanus
ENSPMGG00000000543RPA19955.888ENSBTAG00000009711RPA19953.462Bos_taurus
ENSPMGG00000000543RPA18030.042WBGene00017546rpa-17130.042Caenorhabditis_elegans
ENSPMGG00000000543RPA19955.439ENSCJAG00000001848RPA19954.153Callithrix_jacchus
ENSPMGG00000000543RPA19956.063ENSCAFG00000019249RPA19954.207Canis_familiaris
ENSPMGG00000000543RPA19956.063ENSCAFG00020009847RPA19954.207Canis_lupus_dingo
ENSPMGG00000000543RPA19955.575ENSCHIG00000026308RPA19953.462Capra_hircus
ENSPMGG00000000543RPA19955.009ENSTSYG00000003482-9952.666Carlito_syrichta
ENSPMGG00000000543RPA19956.338ENSCPOG00000000035RPA19953.323Cavia_porcellus
ENSPMGG00000000543RPA19945.614ENSCCAG00000010981RPA19944.984Cebus_capucinus
ENSPMGG00000000543RPA19952.910ENSCLAG00000015045-9950.405Chinchilla_lanigera
ENSPMGG00000000543RPA19956.614ENSCLAG00000005185-9954.207Chinchilla_lanigera
ENSPMGG00000000543RPA19944.834ENSCSAG00000013833RPA19944.444Chlorocebus_sabaeus
ENSPMGG00000000543RPA17862.442ENSCHOG00000009454-9962.442Choloepus_hoffmanni
ENSPMGG00000000543RPA19955.712ENSCHOG00000013540-9854.231Choloepus_hoffmanni
ENSPMGG00000000543RPA19957.522ENSCPBG00000020377RPA19957.522Chrysemys_picta_bellii
ENSPMGG00000000543RPA19943.416ENSCING00000023482-9941.899Ciona_intestinalis
ENSPMGG00000000543RPA19957.477ENSCANG00000030911RPA19658.439Colobus_angolensis_palliatus
ENSPMGG00000000543RPA19956.217ENSCGRG00001008197Rpa19953.933Cricetulus_griseus_chok1gshd
ENSPMGG00000000543RPA18856.800ENSCGRG00000000582Rpa19856.800Cricetulus_griseus_crigri
ENSPMGG00000000543RPA110062.162ENSCSEG00000012726RPA19962.457Cynoglossus_semilaevis
ENSPMGG00000000543RPA19961.580ENSCSEG00000013066rpa19958.264Cynoglossus_semilaevis
ENSPMGG00000000543RPA19564.393ENSCVAG00000013446-9660.092Cyprinodon_variegatus
ENSPMGG00000000543RPA19962.950ENSCVAG00000019431rpa19962.950Cyprinodon_variegatus
ENSPMGG00000000543RPA19962.950ENSDARG00000003938rpa19960.526Danio_rerio
ENSPMGG00000000543RPA19957.293ENSDNOG00000017218RPA19456.131Dasypus_novemcinctus
ENSPMGG00000000543RPA19957.394ENSDORG00000006199Rpa19954.693Dipodomys_ordii
ENSPMGG00000000543RPA19939.929FBgn0010173RpA-709340.675Drosophila_melanogaster
ENSPMGG00000000543RPA18260.000ENSETEG00000017608RPA18260.000Echinops_telfairi
ENSPMGG00000000543RPA19957.246ENSEASG00005009372RPA19857.636Equus_asinus_asinus
ENSPMGG00000000543RPA19956.942ENSECAG00000023886RPA19954.072Equus_caballus
ENSPMGG00000000543RPA17561.814ENSEEUG00000002186-6861.814Erinaceus_europaeus
ENSPMGG00000000543RPA19563.826ENSELUG00000006136RPA19965.625Esox_lucius
ENSPMGG00000000543RPA19961.199ENSELUG00000021071rpa19959.446Esox_lucius
ENSPMGG00000000543RPA19956.437ENSFCAG00000006306RPA19953.312Felis_catus
ENSPMGG00000000543RPA19953.940ENSFALG00000006575RPA19952.167Ficedula_albicollis
ENSPMGG00000000543RPA19955.830ENSFDAG00000007720RPA19953.971Fukomys_damarensis
ENSPMGG00000000543RPA19961.676ENSFHEG00000003580rpa19660.069Fundulus_heteroclitus
ENSPMGG00000000543RPA19961.622ENSGMOG00000010382rpa19960.274Gadus_morhua
ENSPMGG00000000543RPA19955.319ENSGALG00000003072RPA19953.084Gallus_gallus
ENSPMGG00000000543RPA19962.478ENSGAFG00000012916rpa19761.160Gambusia_affinis
ENSPMGG00000000543RPA19966.230ENSGAFG00000020953RPA19961.991Gambusia_affinis
ENSPMGG00000000543RPA19960.893ENSGACG00000010856rpa19958.236Gasterosteus_aculeatus
ENSPMGG00000000543RPA19957.699ENSGAGG00000013611RPA19954.854Gopherus_agassizii
ENSPMGG00000000543RPA19957.246ENSGGOG00000014186RPA19956.388Gorilla_gorilla
ENSPMGG00000000543RPA19963.082ENSHBUG00000017773rpa19958.852Haplochromis_burtoni
ENSPMGG00000000543RPA19964.337ENSHBUG00000009348RPA19964.223Haplochromis_burtoni
ENSPMGG00000000543RPA19956.162ENSHGLG00000008846RPA19954.133Heterocephalus_glaber_female
ENSPMGG00000000543RPA19956.162ENSHGLG00100017755-9954.133Heterocephalus_glaber_male
ENSPMGG00000000543RPA19947.443ENSHGLG00100002005-9945.455Heterocephalus_glaber_male
ENSPMGG00000000543RPA19952.641ENSHGLG00100000799-9950.081Heterocephalus_glaber_male
ENSPMGG00000000543RPA19957.118ENSHCOG00000001401rpa19954.045Hippocampus_comes
ENSPMGG00000000543RPA19952.793ENSHCOG00000000351RPA19852.211Hippocampus_comes
ENSPMGG00000000543RPA19963.055ENSIPUG00000004400rpa110059.157Ictalurus_punctatus
ENSPMGG00000000543RPA19954.957ENSSTOG00000022475RPA19654.766Ictidomys_tridecemlineatus
ENSPMGG00000000543RPA19955.769ENSJJAG00000000876Rpa19755.155Jaculus_jaculus
ENSPMGG00000000543RPA19961.199ENSKMAG00000005605rpa19958.643Kryptolebias_marmoratus
ENSPMGG00000000543RPA19971.658ENSKMAG00000000234RPA19967.480Kryptolebias_marmoratus
ENSPMGG00000000543RPA19960.180ENSLBEG00000021604rpa19958.503Labrus_bergylta
ENSPMGG00000000543RPA19979.258ENSLBEG00000002281RPA19079.258Labrus_bergylta
ENSPMGG00000000543RPA18855.578ENSLACG00000007210RPA19855.578Latimeria_chalumnae
ENSPMGG00000000543RPA19962.100ENSLOCG00000006397rpa19958.728Lepisosteus_oculatus
ENSPMGG00000000543RPA19955.268ENSLAFG00000015354RPA19951.238Loxodonta_africana
ENSPMGG00000000543RPA18254.334ENSMFAG00000036138-9554.752Macaca_fascicularis
ENSPMGG00000000543RPA19954.641ENSMMUG00000011604-9654.296Macaca_mulatta
ENSPMGG00000000543RPA19952.575ENSMMUG00000002442-9949.595Macaca_mulatta
ENSPMGG00000000543RPA19948.814ENSMNEG00000029837-9948.814Macaca_nemestrina
ENSPMGG00000000543RPA19954.291ENSMNEG00000031632-9853.716Macaca_nemestrina
ENSPMGG00000000543RPA19950.871ENSMLEG00000038768-9650.943Mandrillus_leucophaeus
ENSPMGG00000000543RPA19979.054ENSMAMG00000020097RPA19175.630Mastacembelus_armatus
ENSPMGG00000000543RPA19963.129ENSMAMG00000017993rpa19963.139Mastacembelus_armatus
ENSPMGG00000000543RPA19963.082ENSMZEG00005007551rpa19958.852Maylandia_zebra
ENSPMGG00000000543RPA19970.805ENSMZEG00005024731RPA19965.635Maylandia_zebra
ENSPMGG00000000543RPA19954.690ENSMGAG00000005315RPA19353.899Meleagris_gallopavo
ENSPMGG00000000543RPA19955.965ENSMAUG00000010474Rpa19655.959Mesocricetus_auratus
ENSPMGG00000000543RPA19956.643ENSMICG00000012867RPA19954.516Microcebus_murinus
ENSPMGG00000000543RPA19956.239ENSMOCG00000013019Rpa19953.398Microtus_ochrogaster
ENSPMGG00000000543RPA19960.682ENSMMOG00000014292rpa19959.862Mola_mola
ENSPMGG00000000543RPA19971.095ENSMMOG00000010868RPA19669.283Mola_mola
ENSPMGG00000000543RPA19957.719ENSMODG00000010549RPA19955.323Monodelphis_domestica
ENSPMGG00000000543RPA19976.087ENSMALG00000001208RPA19076.087Monopterus_albus
ENSPMGG00000000543RPA19962.094ENSMALG00000011453rpa19859.750Monopterus_albus
ENSPMGG00000000543RPA19955.594MGP_CAROLIEiJ_G0016734Rpa19952.979Mus_caroli
ENSPMGG00000000543RPA19955.536ENSMUSG00000000751Rpa19953.270Mus_musculus
ENSPMGG00000000543RPA19955.633MGP_PahariEiJ_G0017871Rpa19953.365Mus_pahari
ENSPMGG00000000543RPA19955.613MGP_SPRETEiJ_G0017577Rpa19953.344Mus_spretus
ENSPMGG00000000543RPA19955.439ENSMPUG00000013119RPA19953.160Mustela_putorius_furo
ENSPMGG00000000543RPA19957.692ENSMLUG00000006113RPA19257.692Myotis_lucifugus
ENSPMGG00000000543RPA19957.645ENSNGAG00000004522Rpa19655.833Nannospalax_galili
ENSPMGG00000000543RPA19967.914ENSNBRG00000009672RPA19964.098Neolamprologus_brichardi
ENSPMGG00000000543RPA19961.871ENSNBRG00000020595rpa19961.879Neolamprologus_brichardi
ENSPMGG00000000543RPA19955.965ENSNLEG00000017149RPA19954.531Nomascus_leucogenys
ENSPMGG00000000543RPA19950.175ENSMEUG00000006714RPA19947.883Notamacropus_eugenii
ENSPMGG00000000543RPA19956.522ENSODEG00000009038RPA19654.515Octodon_degus
ENSPMGG00000000543RPA19961.754ENSONIG00000013135rpa19957.395Oreochromis_niloticus
ENSPMGG00000000543RPA19956.491ENSOANG00000010880RPA19755.932Ornithorhynchus_anatinus
ENSPMGG00000000543RPA19953.910ENSOCUG00000001504RPA19951.464Oryctolagus_cuniculus
ENSPMGG00000000543RPA19965.025ENSORLG00000003368RPA19278.378Oryzias_latipes
ENSPMGG00000000543RPA19962.366ENSORLG00000004856rpa19960.561Oryzias_latipes
ENSPMGG00000000543RPA19962.366ENSORLG00020008980rpa19960.561Oryzias_latipes_hni
ENSPMGG00000000543RPA19976.805ENSORLG00020015284RPA19276.805Oryzias_latipes_hni
ENSPMGG00000000543RPA19962.366ENSORLG00015013982rpa19960.561Oryzias_latipes_hsok
ENSPMGG00000000543RPA17875.694ENSORLG00015005867-9875.694Oryzias_latipes_hsok
ENSPMGG00000000543RPA19965.997ENSORLG00015020383RPA19963.037Oryzias_latipes_hsok
ENSPMGG00000000543RPA19968.345ENSOMEG00000011040RPA19968.078Oryzias_melastigma
ENSPMGG00000000543RPA19962.007ENSOMEG00000004704rpa19959.802Oryzias_melastigma
ENSPMGG00000000543RPA19956.415ENSOGAG00000005581-9954.045Otolemur_garnettii
ENSPMGG00000000543RPA19350.826ENSOGAG00000029379-9959.259Otolemur_garnettii
ENSPMGG00000000543RPA19955.497ENSOARG00000014479RPA19953.462Ovis_aries
ENSPMGG00000000543RPA19955.789ENSPPAG00000039680RPA19954.369Pan_paniscus
ENSPMGG00000000543RPA19956.437ENSPPRG00000011807RPA19953.312Panthera_pardus
ENSPMGG00000000543RPA19956.437ENSPTIG00000007898RPA19953.312Panthera_tigris_altaica
ENSPMGG00000000543RPA19955.614ENSPTRG00000008539RPA19954.369Pan_troglodytes
ENSPMGG00000000543RPA19954.816ENSPANG00000024592RPA19952.979Papio_anubis
ENSPMGG00000000543RPA19462.942ENSPKIG00000008053rpa19461.340Paramormyrops_kingsleyae
ENSPMGG00000000543RPA19956.460ENSPSIG00000015617RPA19655.536Pelodiscus_sinensis
ENSPMGG00000000543RPA19963.784ENSPMGG00000011589rpa19963.492Periophthalmus_magnuspinnatus
ENSPMGG00000000543RPA19955.908ENSPEMG00000021061Rpa19953.560Peromyscus_maniculatus_bairdii
ENSPMGG00000000543RPA19957.068ENSPCIG00000019049RPA19955.645Phascolarctos_cinereus
ENSPMGG00000000543RPA19962.657ENSPFOG00000003987rpa19760.171Poecilia_formosa
ENSPMGG00000000543RPA19467.888ENSPLAG00000008844-9763.259Poecilia_latipinna
ENSPMGG00000000543RPA19961.676ENSPLAG00000004984rpa19760.000Poecilia_latipinna
ENSPMGG00000000543RPA19962.657ENSPMEG00000020602rpa19961.388Poecilia_mexicana
ENSPMGG00000000543RPA19466.840ENSPMEG00000003627-9763.116Poecilia_mexicana
ENSPMGG00000000543RPA19655.185ENSPREG00000010174rpa19951.877Poecilia_reticulata
ENSPMGG00000000543RPA19975.375ENSPREG00000010119RPA19575.917Poecilia_reticulata
ENSPMGG00000000543RPA19956.743ENSPCOG00000001799RPA19953.698Propithecus_coquereli
ENSPMGG00000000543RPA19956.360ENSPVAG00000002149RPA19953.722Pteropus_vampyrus
ENSPMGG00000000543RPA19963.262ENSPNYG00000016316rpa19962.545Pundamilia_nyererei
ENSPMGG00000000543RPA19970.805ENSPNYG00000024165RPA19965.635Pundamilia_nyererei
ENSPMGG00000000543RPA19956.964ENSPNAG00000008599rpa19953.312Pygocentrus_nattereri
ENSPMGG00000000543RPA19957.346ENSRNOG00000003123Rpa19954.045Rattus_norvegicus
ENSPMGG00000000543RPA19956.316ENSRBIG00000036587RPA19952.818Rhinopithecus_bieti
ENSPMGG00000000543RPA19952.456ENSRROG00000043278RPA19949.275Rhinopithecus_roxellana
ENSPMGG00000000543RPA17935.268YAR007CRFA17235.268Saccharomyces_cerevisiae
ENSPMGG00000000543RPA19755.793ENSSBOG00000030233RPA19657.143Saimiri_boliviensis_boliviensis
ENSPMGG00000000543RPA19957.043ENSSHAG00000007969RPA19456.507Sarcophilus_harrisii
ENSPMGG00000000543RPA19964.591ENSSFOG00015005362rpa19261.275Scleropages_formosus
ENSPMGG00000000543RPA19965.747ENSSMAG00000019746RPA110061.493Scophthalmus_maximus
ENSPMGG00000000543RPA19963.148ENSSDUG00000011949rpa19663.506Seriola_dumerili
ENSPMGG00000000543RPA19965.984ENSSDUG00000016358RPA19579.956Seriola_dumerili
ENSPMGG00000000543RPA19962.791ENSSLDG00000011806rpa19663.327Seriola_lalandi_dorsalis
ENSPMGG00000000543RPA19978.431ENSSLDG00000020784RPA19479.303Seriola_lalandi_dorsalis
ENSPMGG00000000543RPA18251.374ENSSARG00000007506RPA18050.311Sorex_araneus
ENSPMGG00000000543RPA19954.255ENSSPUG00000007223RPA19653.806Sphenodon_punctatus
ENSPMGG00000000543RPA19961.871ENSSPAG00000009903rpa19958.320Stegastes_partitus
ENSPMGG00000000543RPA19972.987ENSSPAG00000011165RPA110070.083Stegastes_partitus
ENSPMGG00000000543RPA19957.477ENSSSCG00000017822RPA19956.610Sus_scrofa
ENSPMGG00000000543RPA19954.885ENSTGUG00000005775RPA19952.496Taeniopygia_guttata
ENSPMGG00000000543RPA19976.316ENSTRUG00000000405RPA18876.316Takifugu_rubripes
ENSPMGG00000000543RPA19961.871ENSTRUG00000003616rpa19958.746Takifugu_rubripes
ENSPMGG00000000543RPA19961.905ENSTNIG00000016199rpa19957.649Tetraodon_nigroviridis
ENSPMGG00000000543RPA17961.591ENSTBEG00000002709RPA17461.591Tupaia_belangeri
ENSPMGG00000000543RPA19954.371ENSTTRG00000001169RPA19952.733Tursiops_truncatus
ENSPMGG00000000543RPA19963.830ENSUAMG00000015676RPA19973.077Ursus_americanus
ENSPMGG00000000543RPA19956.703ENSUMAG00000009328RPA19956.143Ursus_maritimus
ENSPMGG00000000543RPA19954.482ENSVPAG00000009443RPA19453.952Vicugna_pacos
ENSPMGG00000000543RPA19956.184ENSVVUG00000021715RPA19954.369Vulpes_vulpes
ENSPMGG00000000543RPA19959.754ENSXETG00000013538rpa19459.375Xenopus_tropicalis
ENSPMGG00000000543RPA19969.659ENSXCOG00000009899-9970.217Xiphophorus_couchianus
ENSPMGG00000000543RPA19461.877ENSXCOG00000010068rpa19460.000Xiphophorus_couchianus
ENSPMGG00000000543RPA19961.002ENSXMAG00000004102rpa19961.002Xiphophorus_maculatus
ENSPMGG00000000543RPA19975.375ENSXMAG00000010333RPA19175.375Xiphophorus_maculatus

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