EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSPMGG00000000772 (Gene tree)
Gene ID
-
Gene Symbol
csde1
Alias
-
Full Name
cold shock domain containing E1%2C RNA-binding
Gene Type
protein_coding
Species
Periophthalmus_magnuspinnatus
Status
putative
Strand
Plus strand
Length
6365 bases
Position
chrKN463341.1:1466730-1473094
Accession
ZDB-GENE-030131-8623
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSPMGP00000000840CSDPF00313.225.9e-8115
ENSPMGP00000000840CSDPF00313.225.9e-8125
ENSPMGP00000000840CSDPF00313.225.9e-8135
ENSPMGP00000000840CSDPF00313.225.9e-8145
ENSPMGP00000000840CSDPF00313.225.9e-8155
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSPMGT00000000884-2310-ENSPMGP00000000840769 (aa)--
Gene Model
Click here to download ENSPMGG00000000772's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSPMGG00000000772's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSPMGG00000000772csde110077.273ENSG00000009307CSDE110085.106Homo_sapiens
ENSPMGG00000000772csde110090.897ENSAPOG00000015538csde110090.897Acanthochromis_polyacanthus
ENSPMGG00000000772csde110076.494ENSAMEG00000017129CSDE19476.494Ailuropoda_melanoleuca
ENSPMGG00000000772csde19090.566ENSACIG00000015175csde110090.566Amphilophus_citrinellus
ENSPMGG00000000772csde110090.637ENSAOCG00000011510csde110090.637Amphiprion_ocellaris
ENSPMGG00000000772csde110090.767ENSAPEG00000007194csde110090.767Amphiprion_percula
ENSPMGG00000000772csde110089.870ENSATEG00000003864csde110089.870Anabas_testudineus
ENSPMGG00000000772csde110078.674ENSAPLG00000008797CSDE110078.674Anas_platyrhynchos
ENSPMGG00000000772csde110076.250ENSACAG00000003120CSDE110076.250Anolis_carolinensis
ENSPMGG00000000772csde110077.143ENSANAG00000024665CSDE19577.143Aotus_nancymaae
ENSPMGG00000000772csde19361.484ENSANAG00000028396-9361.484Aotus_nancymaae
ENSPMGG00000000772csde110089.610ENSACLG00000013296csde110090.260Astatotilapia_calliptera
ENSPMGG00000000772csde110085.104ENSAMXG00000007436csde110085.104Astyanax_mexicanus
ENSPMGG00000000772csde110077.403ENSBTAG00000000678CSDE110077.403Bos_taurus
ENSPMGG00000000772csde110077.143ENSCJAG00000012565CSDE19477.143Callithrix_jacchus
ENSPMGG00000000772csde19877.719ENSCAFG00000009618CSDE19477.719Canis_familiaris
ENSPMGG00000000772csde110077.532ENSCAFG00020000481CSDE110077.532Canis_lupus_dingo
ENSPMGG00000000772csde110077.143ENSCHIG00000017250CSDE110077.143Capra_hircus
ENSPMGG00000000772csde110077.273ENSTSYG00000003747CSDE110077.273Carlito_syrichta
ENSPMGG00000000772csde110059.820ENSCAPG00000015128CSDE110059.820Cavia_aperea
ENSPMGG00000000772csde110071.717ENSCPOG00000040388CSDE110071.717Cavia_porcellus
ENSPMGG00000000772csde19654.667ENSCCAG00000030878-9154.667Cebus_capucinus
ENSPMGG00000000772csde19556.265ENSCCAG00000033677-9956.265Cebus_capucinus
ENSPMGG00000000772csde110077.143ENSCCAG00000036794CSDE110074.157Cebus_capucinus
ENSPMGG00000000772csde110077.273ENSCATG00000036962CSDE19777.273Cercocebus_atys
ENSPMGG00000000772csde110077.403ENSCLAG00000006618CSDE110077.403Chinchilla_lanigera
ENSPMGG00000000772csde110074.282ENSCSAG00000001658CSDE19574.282Chlorocebus_sabaeus
ENSPMGG00000000772csde110075.216ENSCHOG00000000918CSDE18975.216Choloepus_hoffmanni
ENSPMGG00000000772csde110078.674ENSCPBG00000016547CSDE110078.674Chrysemys_picta_bellii
ENSPMGG00000000772csde19743.050ENSCING00000014465-9643.050Ciona_intestinalis
ENSPMGG00000000772csde19740.678ENSCSAVG00000008100-10039.852Ciona_savignyi
ENSPMGG00000000772csde110077.273ENSCANG00000035096CSDE19777.273Colobus_angolensis_palliatus
ENSPMGG00000000772csde19969.245ENSCANG00000031069-9478.519Colobus_angolensis_palliatus
ENSPMGG00000000772csde110077.013ENSCGRG00001016833-10077.013Cricetulus_griseus_chok1gshd
ENSPMGG00000000772csde110063.247ENSCGRG00001014011-10063.247Cricetulus_griseus_chok1gshd
ENSPMGG00000000772csde110073.913ENSCGRG00000005831-10073.913Cricetulus_griseus_crigri
ENSPMGG00000000772csde19673.392ENSCGRG00000002225-10073.392Cricetulus_griseus_crigri
ENSPMGG00000000772csde110088.442ENSCSEG00000002620csde110088.442Cynoglossus_semilaevis
ENSPMGG00000000772csde110088.442ENSCVAG00000001344csde110088.442Cyprinodon_variegatus
ENSPMGG00000000772csde110081.750ENSDARG00000074758csde110082.850Danio_rerio
ENSPMGG00000000772csde16251.711ENSDNOG00000034464-9951.711Dasypus_novemcinctus
ENSPMGG00000000772csde110077.562ENSDNOG00000010287-9377.562Dasypus_novemcinctus
ENSPMGG00000000772csde19975.708ENSDORG00000011609Csde110075.708Dipodomys_ordii
ENSPMGG00000000772csde19848.875FBgn0263352Unr8248.676Drosophila_melanogaster
ENSPMGG00000000772csde19381.967ENSETEG00000002491-8272.334Echinops_telfairi
ENSPMGG00000000772csde19068.562ENSETEG00000006280-9968.562Echinops_telfairi
ENSPMGG00000000772csde17954.366ENSETEG00000007109-9954.366Echinops_telfairi
ENSPMGG00000000772csde19960.156ENSETEG00000013678-9960.156Echinops_telfairi
ENSPMGG00000000772csde19954.121ENSEBUG00000008647csde19952.443Eptatretus_burgeri
ENSPMGG00000000772csde110077.662ENSEASG00005006284CSDE110074.657Equus_asinus_asinus
ENSPMGG00000000772csde110077.662ENSECAG00000020885CSDE19977.343Equus_caballus
ENSPMGG00000000772csde19381.875ENSEEUG00000006286CSDE16881.875Erinaceus_europaeus
ENSPMGG00000000772csde110083.592ENSELUG00000015507csde110083.592Esox_lucius
ENSPMGG00000000772csde110077.532ENSFCAG00000029266CSDE110077.532Felis_catus
ENSPMGG00000000772csde110075.125ENSFALG00000003407CSDE110075.125Ficedula_albicollis
ENSPMGG00000000772csde19975.708ENSFDAG00000007882CSDE110075.708Fukomys_damarensis
ENSPMGG00000000772csde19888.492ENSFHEG00000010799csde19988.492Fundulus_heteroclitus
ENSPMGG00000000772csde19982.979ENSGMOG00000012731csde110082.979Gadus_morhua
ENSPMGG00000000772csde19875.541ENSGALG00000002139CSDE19875.541Gallus_gallus
ENSPMGG00000000772csde19388.855ENSGAFG00000005241csde19588.855Gambusia_affinis
ENSPMGG00000000772csde19985.714ENSGACG00000004544csde110085.714Gasterosteus_aculeatus
ENSPMGG00000000772csde110078.674ENSGAGG00000017685CSDE110075.625Gopherus_agassizii
ENSPMGG00000000772csde110077.273ENSGGOG00000002164CSDE110077.273Gorilla_gorilla
ENSPMGG00000000772csde110089.610ENSHBUG00000020315csde110090.260Haplochromis_burtoni
ENSPMGG00000000772csde110069.481ENSHGLG00000003829-10069.481Heterocephalus_glaber_female
ENSPMGG00000000772csde110063.145ENSHGLG00000019549-10063.145Heterocephalus_glaber_female
ENSPMGG00000000772csde19959.000ENSHGLG00000000650-9959.000Heterocephalus_glaber_female
ENSPMGG00000000772csde19666.915ENSHGLG00000008555-10066.915Heterocephalus_glaber_female
ENSPMGG00000000772csde19665.410ENSHGLG00000010039-10065.410Heterocephalus_glaber_female
ENSPMGG00000000772csde19966.492ENSHGLG00000007471-9866.492Heterocephalus_glaber_female
ENSPMGG00000000772csde110069.870ENSHGLG00000009620-10070.260Heterocephalus_glaber_female
ENSPMGG00000000772csde19962.095ENSHGLG00100002245-9962.095Heterocephalus_glaber_male
ENSPMGG00000000772csde19660.089ENSHGLG00100004833-10060.089Heterocephalus_glaber_male
ENSPMGG00000000772csde19965.969ENSHGLG00100007287-9865.969Heterocephalus_glaber_male
ENSPMGG00000000772csde110063.165ENSHGLG00100001846-10063.165Heterocephalus_glaber_male
ENSPMGG00000000772csde110077.013ENSHGLG00100019438-10077.013Heterocephalus_glaber_male
ENSPMGG00000000772csde19665.410ENSHGLG00100006910-10065.410Heterocephalus_glaber_male
ENSPMGG00000000772csde19365.229ENSHGLG00100004195-10065.229Heterocephalus_glaber_male
ENSPMGG00000000772csde110065.065ENSHGLG00100012072-10065.065Heterocephalus_glaber_male
ENSPMGG00000000772csde110088.312ENSHCOG00000004158csde110088.312Hippocampus_comes
ENSPMGG00000000772csde110083.808ENSIPUG00000000355csde110083.808Ictalurus_punctatus
ENSPMGG00000000772csde19061.272ENSSTOG00000032722-9865.164Ictidomys_tridecemlineatus
ENSPMGG00000000772csde110064.158ENSSTOG00000030994-10064.158Ictidomys_tridecemlineatus
ENSPMGG00000000772csde19976.006ENSJJAG00000019571Csde110076.006Jaculus_jaculus
ENSPMGG00000000772csde110084.932ENSKMAG00000005685csde110084.615Kryptolebias_marmoratus
ENSPMGG00000000772csde110090.000ENSLBEG00000014770csde110090.000Labrus_bergylta
ENSPMGG00000000772csde110072.660ENSLACG00000018452CSDE19472.660Latimeria_chalumnae
ENSPMGG00000000772csde110080.702ENSLOCG00000010413csde19480.702Lepisosteus_oculatus
ENSPMGG00000000772csde110076.753ENSLAFG00000007150CSDE19676.753Loxodonta_africana
ENSPMGG00000000772csde110077.273ENSMFAG00000003674CSDE110077.273Macaca_fascicularis
ENSPMGG00000000772csde110077.273ENSMMUG00000001974CSDE110077.273Macaca_mulatta
ENSPMGG00000000772csde110077.273ENSMNEG00000045247CSDE19777.273Macaca_nemestrina
ENSPMGG00000000772csde110077.013ENSMLEG00000038673CSDE19477.013Mandrillus_leucophaeus
ENSPMGG00000000772csde110090.507ENSMAMG00000008821csde110090.507Mastacembelus_armatus
ENSPMGG00000000772csde110089.610ENSMZEG00005021675csde110090.260Maylandia_zebra
ENSPMGG00000000772csde110078.571ENSMGAG00000016381CSDE110078.571Meleagris_gallopavo
ENSPMGG00000000772csde19975.857ENSMAUG00000014031Csde110075.857Mesocricetus_auratus
ENSPMGG00000000772csde110077.273ENSMICG00000002050CSDE19677.214Microcebus_murinus
ENSPMGG00000000772csde110077.013ENSMOCG00000018960Csde110077.013Microtus_ochrogaster
ENSPMGG00000000772csde110090.909ENSMMOG00000015075csde110090.909Mola_mola
ENSPMGG00000000772csde110077.850ENSMODG00000004685CSDE110075.655Monodelphis_domestica
ENSPMGG00000000772csde110090.390ENSMALG00000007132csde110090.390Monopterus_albus
ENSPMGG00000000772csde110077.143MGP_CAROLIEiJ_G0025444Csde19292.157Mus_caroli
ENSPMGG00000000772csde110077.143ENSMUSG00000068823Csde110083.444Mus_musculus
ENSPMGG00000000772csde110077.143MGP_PahariEiJ_G0026888Csde19292.157Mus_pahari
ENSPMGG00000000772csde110077.143MGP_SPRETEiJ_G0026394Csde19292.157Mus_spretus
ENSPMGG00000000772csde19874.650ENSMPUG00000005753CSDE19974.650Mustela_putorius_furo
ENSPMGG00000000772csde110077.013ENSMLUG00000005681CSDE19477.013Myotis_lucifugus
ENSPMGG00000000772csde19652.772ENSNGAG00000012599-10052.772Nannospalax_galili
ENSPMGG00000000772csde19975.708ENSNGAG00000021929Csde110075.708Nannospalax_galili
ENSPMGG00000000772csde110089.610ENSNBRG00000020808csde110090.260Neolamprologus_brichardi
ENSPMGG00000000772csde110077.273ENSNLEG00000004842CSDE19777.273Nomascus_leucogenys
ENSPMGG00000000772csde19875.862ENSMEUG00000002677CSDE19975.862Notamacropus_eugenii
ENSPMGG00000000772csde19871.287ENSOPRG00000005002CSDE18271.287Ochotona_princeps
ENSPMGG00000000772csde19651.322ENSODEG00000005979-9851.322Octodon_degus
ENSPMGG00000000772csde19975.857ENSODEG00000007383-10075.857Octodon_degus
ENSPMGG00000000772csde110084.963ENSONIG00000009309csde110084.963Oreochromis_niloticus
ENSPMGG00000000772csde110081.356ENSOANG00000003346-8181.356Ornithorhynchus_anatinus
ENSPMGG00000000772csde110076.883ENSOCUG00000016438CSDE19476.883Oryctolagus_cuniculus
ENSPMGG00000000772csde110088.557ENSORLG00000000707csde110088.557Oryzias_latipes
ENSPMGG00000000772csde110085.338ENSORLG00020005148csde110083.354Oryzias_latipes_hni
ENSPMGG00000000772csde110088.427ENSORLG00015019415csde110088.427Oryzias_latipes_hsok
ENSPMGG00000000772csde110089.337ENSOMEG00000015656csde110089.337Oryzias_melastigma
ENSPMGG00000000772csde110077.403ENSOGAG00000012127CSDE19477.403Otolemur_garnettii
ENSPMGG00000000772csde110077.273ENSOARG00000020034CSDE19477.273Ovis_aries
ENSPMGG00000000772csde110077.273ENSPPAG00000025861CSDE110077.273Pan_paniscus
ENSPMGG00000000772csde110077.532ENSPPRG00000006747CSDE19477.532Panthera_pardus
ENSPMGG00000000772csde110077.532ENSPTIG00000015468CSDE110074.532Panthera_tigris_altaica
ENSPMGG00000000772csde110077.273ENSPTRG00000033721CSDE110074.282Pan_troglodytes
ENSPMGG00000000772csde110077.273ENSPANG00000018873CSDE110077.273Papio_anubis
ENSPMGG00000000772csde110083.615ENSPKIG00000009459csde110083.615Paramormyrops_kingsleyae
ENSPMGG00000000772csde19677.162ENSPSIG00000003823CSDE19577.162Pelodiscus_sinensis
ENSPMGG00000000772csde19976.155ENSPEMG00000020357-10076.155Peromyscus_maniculatus_bairdii
ENSPMGG00000000772csde110075.780ENSPCIG00000022587CSDE110075.780Phascolarctos_cinereus
ENSPMGG00000000772csde19786.936ENSPFOG00000012664csde110087.092Poecilia_formosa
ENSPMGG00000000772csde19581.595ENSPLAG00000017680csde19381.595Poecilia_latipinna
ENSPMGG00000000772csde19581.748ENSPMEG00000005094csde19581.748Poecilia_mexicana
ENSPMGG00000000772csde110085.162ENSPREG00000011631csde110082.410Poecilia_reticulata
ENSPMGG00000000772csde110074.157ENSPPYG00000000996CSDE110074.157Pongo_abelii
ENSPMGG00000000772csde110074.675ENSPCAG00000014368CSDE19474.675Procavia_capensis
ENSPMGG00000000772csde19069.517ENSPCOG00000008223-9269.517Propithecus_coquereli
ENSPMGG00000000772csde110077.532ENSPCOG00000017893CSDE110077.532Propithecus_coquereli
ENSPMGG00000000772csde110072.078ENSPVAG00000008225CSDE19572.078Pteropus_vampyrus
ENSPMGG00000000772csde110089.610ENSPNYG00000013745csde110090.260Pundamilia_nyererei
ENSPMGG00000000772csde110085.751ENSPNAG00000001958csde110085.751Pygocentrus_nattereri
ENSPMGG00000000772csde110074.032ENSRNOG00000061058Csde110074.032Rattus_norvegicus
ENSPMGG00000000772csde110074.449ENSRBIG00000038088-10074.449Rhinopithecus_bieti
ENSPMGG00000000772csde110073.247ENSRBIG00000038966-9473.247Rhinopithecus_bieti
ENSPMGG00000000772csde110077.273ENSRROG00000043101CSDE19777.273Rhinopithecus_roxellana
ENSPMGG00000000772csde110077.143ENSSBOG00000035592CSDE19577.143Saimiri_boliviensis_boliviensis
ENSPMGG00000000772csde110078.831ENSSHAG00000009831CSDE110078.831Sarcophilus_harrisii
ENSPMGG00000000772csde110082.361ENSSFOG00015007498csde110082.361Scleropages_formosus
ENSPMGG00000000772csde110089.337ENSSMAG00000007203csde110089.337Scophthalmus_maximus
ENSPMGG00000000772csde110091.547ENSSDUG00000015380csde110091.547Seriola_dumerili
ENSPMGG00000000772csde110091.547ENSSLDG00000008819csde110091.547Seriola_lalandi_dorsalis
ENSPMGG00000000772csde110076.753ENSSARG00000000738CSDE19476.753Sorex_araneus
ENSPMGG00000000772csde110079.194ENSSPUG00000008714CSDE110079.194Sphenodon_punctatus
ENSPMGG00000000772csde110090.637ENSSPAG00000000716csde110090.637Stegastes_partitus
ENSPMGG00000000772csde110077.662ENSSSCG00000006752CSDE110077.662Sus_scrofa
ENSPMGG00000000772csde110074.564ENSTGUG00000000972CSDE110074.564Taeniopygia_guttata
ENSPMGG00000000772csde110085.436ENSTRUG00000007996csde110085.436Takifugu_rubripes
ENSPMGG00000000772csde17183.525ENSTNIG00000010878csde110083.525Tetraodon_nigroviridis
ENSPMGG00000000772csde17680.368ENSTBEG00000011880-6180.368Tupaia_belangeri
ENSPMGG00000000772csde110076.753ENSTTRG00000015583CSDE19476.753Tursiops_truncatus
ENSPMGG00000000772csde19381.046ENSUAMG00000021779-9881.046Ursus_americanus
ENSPMGG00000000772csde18772.756ENSUAMG00000024289-9972.756Ursus_americanus
ENSPMGG00000000772csde18672.340ENSUMAG00000011714-9972.340Ursus_maritimus
ENSPMGG00000000772csde110071.039ENSUMAG00000009720-9771.039Ursus_maritimus
ENSPMGG00000000772csde110079.535ENSVPAG00000000749CSDE17979.535Vicugna_pacos
ENSPMGG00000000772csde19373.032ENSVVUG00000009890CSDE19373.032Vulpes_vulpes
ENSPMGG00000000772csde110075.124ENSXETG00000021448csde110075.124Xenopus_tropicalis
ENSPMGG00000000772csde19392.391ENSXCOG00000000035csde18992.391Xiphophorus_couchianus
ENSPMGG00000000772csde19888.874ENSXMAG00000009080csde19888.874Xiphophorus_maculatus

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