EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMGG00000001808 (Gene tree)
Gene ID: -
Gene Symbol: u2surp
Alias: -
Full Name: U2 snRNP-associated SURP domain containing
Gene Type: protein_coding
Species: Periophthalmus_magnuspinnatus
Status: putative
Strand: Plus strand
Length: 9922 bases
Position: chrKN462912.1:61292-71213
Accession: ZDB-GENE-070912-400
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMGP00000002006	RRM_1	PF00076.22	4.6e-16	1	1
ENSPMGP00000002006	Surp	PF01805.20	6e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMGT00000002136	-	1065	-	ENSPMGP00000002006	354 (aa)	-	-

Gene Model

Click here to download ENSPMGG00000001808's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMGG00000001808's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMGG00000001808	u2surp	93	76.567	ENSG00000163714	U2SURP	79	73.276	Homo_sapiens
ENSPMGG00000001808	u2surp	88	55.891	ENSAMXG00000005081	zgc:163098	86	56.966	Astyanax_mexicanus
ENSPMGG00000001808	u2surp	81	72.755	ENSBTAG00000009154	U2SURP	76	73.538	Bos_taurus
ENSPMGG00000001808	u2surp	93	76.359	ENSCAFG00020010497	U2SURP	82	73.538	Canis_lupus_dingo
ENSPMGG00000001808	u2surp	93	76.359	ENSTSYG00000008889	U2SURP	81	68.876	Carlito_syrichta
ENSPMGG00000001808	u2surp	93	76.359	ENSCCAG00000032530	U2SURP	80	73.538	Cebus_capucinus
ENSPMGG00000001808	u2surp	99	59.341	ENSDARG00000078911	zgc:163098	98	59.890	Danio_rerio
ENSPMGG00000001808	u2surp	93	81.818	ENSDARG00000061490	u2surp	89	82.258	Danio_rerio
ENSPMGG00000001808	u2surp	81	72.222	ENSDORG00000005201	-	77	73.006	Dipodomys_ordii
ENSPMGG00000001808	u2surp	94	76.203	ENSGALG00000002612	U2SURP	73	72.810	Gallus_gallus
ENSPMGG00000001808	u2surp	86	50.968	ENSGAFG00000003687	-	99	49.857	Gambusia_affinis
ENSPMGG00000001808	u2surp	93	76.359	ENSGGOG00000005563	U2SURP	76	73.538	Gorilla_gorilla
ENSPMGG00000001808	u2surp	87	55.763	ENSHCOG00000001838	zgc:163098	81	54.360	Hippocampus_comes
ENSPMGG00000001808	u2surp	93	76.359	ENSMMUG00000002775	U2SURP	76	73.538	Macaca_mulatta
ENSPMGG00000001808	u2surp	81	73.065	ENSMAUG00000009255	-	76	73.846	Mesocricetus_auratus
ENSPMGG00000001808	u2surp	93	76.839	MGP_CAROLIEiJ_G0032530	-	76	73.846	Mus_caroli
ENSPMGG00000001808	u2surp	93	76.839	ENSMUSG00000032407	U2surp	76	73.846	Mus_musculus
ENSPMGG00000001808	u2surp	93	76.839	MGP_PahariEiJ_G0015398	U2surp	76	73.846	Mus_pahari
ENSPMGG00000001808	u2surp	93	76.839	MGP_SPRETEiJ_G0033672	U2surp	76	73.846	Mus_spretus
ENSPMGG00000001808	u2surp	93	78.297	ENSNBRG00000017162	u2surp	89	80.000	Neolamprologus_brichardi
ENSPMGG00000001808	u2surp	95	84.884	ENSOMEG00000004962	u2surp	98	84.884	Oryzias_melastigma
ENSPMGG00000001808	u2surp	80	73.209	ENSPPAG00000027945	-	79	73.994	Pan_paniscus
ENSPMGG00000001808	u2surp	93	76.359	ENSPTRG00000015489	U2SURP	76	73.538	Pan_troglodytes
ENSPMGG00000001808	u2surp	88	56.825	ENSPMGG00000008623	zgc:163098	95	58.673	Periophthalmus_magnuspinnatus
ENSPMGG00000001808	u2surp	87	62.617	ENSSFOG00015004962	zgc:163098	83	59.810	Scleropages_formosus
ENSPMGG00000001808	u2surp	91	57.307	ENSSLDG00000020364	zgc:163098	99	56.649	Seriola_lalandi_dorsalis
ENSPMGG00000001808	u2surp	93	76.359	ENSUAMG00000028259	U2SURP	82	73.538	Ursus_americanus