EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMGG00000002260 (Gene tree)
Gene ID: -
Gene Symbol: scrt1b
Alias: -
Full Name: scratch family zinc finger 1b
Gene Type: protein_coding
Species: Periophthalmus_magnuspinnatus
Status: putative
Strand: Minus strand
Length: 3187 bases
Position: chrKN461354.1:212342-215528
Accession: ZDB-GENE-050327-72
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMGP00000002593	zf-C2H2	PF00096.26	8.3e-26	1	4
ENSPMGP00000002593	zf-C2H2	PF00096.26	8.3e-26	2	4
ENSPMGP00000002593	zf-C2H2	PF00096.26	8.3e-26	3	4
ENSPMGP00000002593	zf-C2H2	PF00096.26	8.3e-26	4	4
ENSPMGP00000002593	zf-met	PF12874.7	3.6e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMGT00000002743	-	822	-	ENSPMGP00000002593	273 (aa)	-	-

Gene Model

Click here to download ENSPMGG00000002260's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMGG00000002260's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMGG00000002260	scrt1b	96	69.231	ENSAPOG00000003680	scrt2	96	69.231	Acanthochromis_polyacanthus
ENSPMGG00000002260	scrt1b	100	92.500	ENSAPOG00000009279	scrt1b	100	92.500	Acanthochromis_polyacanthus
ENSPMGG00000002260	scrt1b	99	74.386	ENSAPOG00000015197	-	99	74.386	Acanthochromis_polyacanthus
ENSPMGG00000002260	scrt1b	96	68.727	ENSACIG00000012604	scrt2	96	68.727	Amphilophus_citrinellus
ENSPMGG00000002260	scrt1b	100	89.286	ENSACIG00000013613	scrt1b	100	89.286	Amphilophus_citrinellus
ENSPMGG00000002260	scrt1b	96	58.054	ENSACIG00000001296	-	96	57.383	Amphilophus_citrinellus
ENSPMGG00000002260	scrt1b	99	72.910	ENSACIG00000006586	-	99	72.910	Amphilophus_citrinellus
ENSPMGG00000002260	scrt1b	96	69.231	ENSAOCG00000021557	scrt2	96	69.231	Amphiprion_ocellaris
ENSPMGG00000002260	scrt1b	100	92.857	ENSAOCG00000003910	scrt1b	100	92.857	Amphiprion_ocellaris
ENSPMGG00000002260	scrt1b	99	72.910	ENSAOCG00000023304	-	99	72.910	Amphiprion_ocellaris
ENSPMGG00000002260	scrt1b	96	69.231	ENSAPEG00000022558	scrt2	96	69.231	Amphiprion_percula
ENSPMGG00000002260	scrt1b	99	72.910	ENSAPEG00000005677	-	99	72.910	Amphiprion_percula
ENSPMGG00000002260	scrt1b	100	92.857	ENSAPEG00000000869	scrt1b	100	92.857	Amphiprion_percula
ENSPMGG00000002260	scrt1b	96	54.516	ENSATEG00000003195	-	97	54.662	Anabas_testudineus
ENSPMGG00000002260	scrt1b	100	92.143	ENSATEG00000002302	scrt1b	100	92.143	Anabas_testudineus
ENSPMGG00000002260	scrt1b	99	73.684	ENSATEG00000011660	-	99	73.684	Anabas_testudineus
ENSPMGG00000002260	scrt1b	96	63.312	ENSATEG00000023998	scrt2	97	63.312	Anabas_testudineus
ENSPMGG00000002260	scrt1b	78	75.587	ENSACAG00000016109	SCRT2	95	75.587	Anolis_carolinensis
ENSPMGG00000002260	scrt1b	100	92.143	ENSACLG00000007162	scrt1b	100	92.143	Astatotilapia_calliptera
ENSPMGG00000002260	scrt1b	99	70.199	ENSACLG00000012046	-	99	70.199	Astatotilapia_calliptera
ENSPMGG00000002260	scrt1b	100	79.928	ENSAMXG00000038085	scrt1a	100	81.071	Astyanax_mexicanus
ENSPMGG00000002260	scrt1b	84	73.950	ENSAMXG00000034158	scrt2	86	73.950	Astyanax_mexicanus
ENSPMGG00000002260	scrt1b	98	80.505	ENSAMXG00000042624	SCRT1	99	80.505	Astyanax_mexicanus
ENSPMGG00000002260	scrt1b	59	61.728	WBGene00000468	ces-1	59	61.728	Caenorhabditis_elegans
ENSPMGG00000002260	scrt1b	99	81.720	ENSCPBG00000018899	SCRT1	99	81.720	Chrysemys_picta_bellii
ENSPMGG00000002260	scrt1b	86	62.800	ENSCPBG00000027613	SCRT2	100	62.800	Chrysemys_picta_bellii
ENSPMGG00000002260	scrt1b	98	73.311	ENSCSEG00000014892	-	98	73.311	Cynoglossus_semilaevis
ENSPMGG00000002260	scrt1b	96	64.901	ENSCSEG00000021542	scrt2	96	64.901	Cynoglossus_semilaevis
ENSPMGG00000002260	scrt1b	100	91.429	ENSCSEG00000008596	scrt1b	100	91.429	Cynoglossus_semilaevis
ENSPMGG00000002260	scrt1b	100	91.429	ENSCVAG00000009561	scrt1b	100	91.429	Cyprinodon_variegatus
ENSPMGG00000002260	scrt1b	96	63.107	ENSCVAG00000021038	scrt2	97	63.107	Cyprinodon_variegatus
ENSPMGG00000002260	scrt1b	99	72.910	ENSCVAG00000003190	-	99	72.910	Cyprinodon_variegatus
ENSPMGG00000002260	scrt1b	100	83.571	ENSDARG00000040214	scrt1b	100	83.571	Danio_rerio
ENSPMGG00000002260	scrt1b	100	82.857	ENSDARG00000100821	scrt1a	100	82.857	Danio_rerio
ENSPMGG00000002260	scrt1b	97	64.238	ENSELUG00000023883	scrt2	96	66.555	Esox_lucius
ENSPMGG00000002260	scrt1b	99	84.946	ENSELUG00000022228	scrt1a	99	84.946	Esox_lucius
ENSPMGG00000002260	scrt1b	99	85.560	ENSELUG00000005435	scrt1b	99	85.560	Esox_lucius
ENSPMGG00000002260	scrt1b	85	71.983	ENSFALG00000005718	SCRT2	96	71.983	Ficedula_albicollis
ENSPMGG00000002260	scrt1b	96	61.481	ENSFDAG00000008733	SCRT1	97	61.481	Fukomys_damarensis
ENSPMGG00000002260	scrt1b	99	73.244	ENSFHEG00000009794	-	99	73.244	Fundulus_heteroclitus
ENSPMGG00000002260	scrt1b	96	71.375	ENSFHEG00000005732	scrt2	96	71.375	Fundulus_heteroclitus
ENSPMGG00000002260	scrt1b	100	92.143	ENSFHEG00000014820	scrt1b	100	92.143	Fundulus_heteroclitus
ENSPMGG00000002260	scrt1b	99	88.530	ENSGMOG00000000629	scrt1b	100	88.530	Gadus_morhua
ENSPMGG00000002260	scrt1b	96	59.091	ENSGMOG00000019519	scrt2	95	59.091	Gadus_morhua
ENSPMGG00000002260	scrt1b	96	64.706	ENSGALG00000028912	SCRT2	97	65.809	Gallus_gallus
ENSPMGG00000002260	scrt1b	96	65.541	ENSGAFG00000003093	scrt2	96	65.541	Gambusia_affinis
ENSPMGG00000002260	scrt1b	100	91.786	ENSGAFG00000007636	scrt1b	100	91.786	Gambusia_affinis
ENSPMGG00000002260	scrt1b	99	74.909	ENSGAFG00000009650	-	99	74.909	Gambusia_affinis
ENSPMGG00000002260	scrt1b	99	71.864	ENSGACG00000004072	-	99	71.864	Gasterosteus_aculeatus
ENSPMGG00000002260	scrt1b	99	88.172	ENSGACG00000008982	scrt1b	99	88.172	Gasterosteus_aculeatus
ENSPMGG00000002260	scrt1b	99	81.949	ENSGAGG00000011736	SCRT1	100	81.949	Gopherus_agassizii
ENSPMGG00000002260	scrt1b	70	76.166	ENSGAGG00000020760	-	75	76.166	Gopherus_agassizii
ENSPMGG00000002260	scrt1b	96	66.052	ENSGAGG00000020761	SCRT2	96	66.052	Gopherus_agassizii
ENSPMGG00000002260	scrt1b	100	92.143	ENSHBUG00000016621	scrt1b	100	92.143	Haplochromis_burtoni
ENSPMGG00000002260	scrt1b	99	72.575	ENSHBUG00000019101	-	99	72.575	Haplochromis_burtoni
ENSPMGG00000002260	scrt1b	96	69.231	ENSHBUG00000012492	scrt2	96	69.231	Haplochromis_burtoni
ENSPMGG00000002260	scrt1b	100	90.714	ENSHCOG00000016704	scrt1b	100	90.714	Hippocampus_comes
ENSPMGG00000002260	scrt1b	99	68.905	ENSHCOG00000016179	-	99	68.905	Hippocampus_comes
ENSPMGG00000002260	scrt1b	96	67.247	ENSHCOG00000008116	scrt2	96	67.247	Hippocampus_comes
ENSPMGG00000002260	scrt1b	99	83.513	ENSIPUG00000004551	scrt1a	99	83.513	Ictalurus_punctatus
ENSPMGG00000002260	scrt1b	98	79.851	ENSIPUG00000005547	-	99	79.851	Ictalurus_punctatus
ENSPMGG00000002260	scrt1b	52	84.397	ENSSTOG00000032944	SCRT2	84	79.618	Ictidomys_tridecemlineatus
ENSPMGG00000002260	scrt1b	96	64.610	ENSKMAG00000018087	scrt2	97	64.610	Kryptolebias_marmoratus
ENSPMGG00000002260	scrt1b	100	92.143	ENSKMAG00000005484	scrt1b	100	92.143	Kryptolebias_marmoratus
ENSPMGG00000002260	scrt1b	99	70.903	ENSKMAG00000009489	-	99	72.575	Kryptolebias_marmoratus
ENSPMGG00000002260	scrt1b	99	71.380	ENSLBEG00000023388	-	99	72.054	Labrus_bergylta
ENSPMGG00000002260	scrt1b	96	63.107	ENSLBEG00000015419	scrt2	97	63.107	Labrus_bergylta
ENSPMGG00000002260	scrt1b	100	83.214	ENSLACG00000003588	SCRT1	99	83.214	Latimeria_chalumnae
ENSPMGG00000002260	scrt1b	100	86.429	ENSLOCG00000007573	scrt1b	100	86.429	Lepisosteus_oculatus
ENSPMGG00000002260	scrt1b	96	54.313	ENSLOCG00000002246	scrt2	97	55.195	Lepisosteus_oculatus
ENSPMGG00000002260	scrt1b	96	63.636	ENSMAMG00000001291	scrt2	97	62.987	Mastacembelus_armatus
ENSPMGG00000002260	scrt1b	100	92.857	ENSMAMG00000011698	scrt1b	100	92.857	Mastacembelus_armatus
ENSPMGG00000002260	scrt1b	96	69.231	ENSMZEG00005026445	scrt2	96	69.231	Maylandia_zebra
ENSPMGG00000002260	scrt1b	99	72.575	ENSMZEG00005026702	-	99	72.575	Maylandia_zebra
ENSPMGG00000002260	scrt1b	100	92.143	ENSMZEG00005005627	scrt1b	100	92.143	Maylandia_zebra
ENSPMGG00000002260	scrt1b	85	70.130	ENSMGAG00000016579	SCRT2	96	70.563	Meleagris_gallopavo
ENSPMGG00000002260	scrt1b	96	63.934	ENSMMOG00000009272	scrt2	97	64.918	Mola_mola
ENSPMGG00000002260	scrt1b	99	73.244	ENSMMOG00000018345	-	99	73.244	Mola_mola
ENSPMGG00000002260	scrt1b	100	90.357	ENSMMOG00000003327	scrt1b	100	90.357	Mola_mola
ENSPMGG00000002260	scrt1b	100	92.857	ENSMALG00000012704	scrt1b	100	92.857	Monopterus_albus
ENSPMGG00000002260	scrt1b	96	68.231	ENSMALG00000013656	scrt2	96	68.231	Monopterus_albus
ENSPMGG00000002260	scrt1b	96	54.198	ENSNGAG00000020815	Scrt2	99	53.676	Nannospalax_galili
ENSPMGG00000002260	scrt1b	99	72.241	ENSNBRG00000014882	-	99	72.241	Neolamprologus_brichardi
ENSPMGG00000002260	scrt1b	100	89.286	ENSNBRG00000013983	scrt1b	100	89.286	Neolamprologus_brichardi
ENSPMGG00000002260	scrt1b	96	68.864	ENSNBRG00000007221	scrt2	96	68.864	Neolamprologus_brichardi
ENSPMGG00000002260	scrt1b	96	68.954	ENSONIG00000019809	-	99	68.954	Oreochromis_niloticus
ENSPMGG00000002260	scrt1b	96	63.312	ENSONIG00000016758	scrt2	97	63.312	Oreochromis_niloticus
ENSPMGG00000002260	scrt1b	100	92.143	ENSONIG00000006007	scrt1b	100	92.143	Oreochromis_niloticus
ENSPMGG00000002260	scrt1b	96	60.949	ENSONIG00000003152	-	96	60.949	Oreochromis_niloticus
ENSPMGG00000002260	scrt1b	96	63.961	ENSORLG00000024051	scrt2	97	63.961	Oryzias_latipes
ENSPMGG00000002260	scrt1b	99	71.333	ENSORLG00000022825	-	99	71.333	Oryzias_latipes
ENSPMGG00000002260	scrt1b	100	92.500	ENSORLG00000025651	scrt1b	100	92.500	Oryzias_latipes
ENSPMGG00000002260	scrt1b	100	92.500	ENSORLG00020012967	scrt1b	100	92.500	Oryzias_latipes_hni
ENSPMGG00000002260	scrt1b	96	63.961	ENSORLG00020011478	scrt2	97	63.961	Oryzias_latipes_hni
ENSPMGG00000002260	scrt1b	100	92.500	ENSORLG00015019165	scrt1b	100	92.500	Oryzias_latipes_hsok
ENSPMGG00000002260	scrt1b	99	72.000	ENSORLG00015010104	-	99	72.000	Oryzias_latipes_hsok
ENSPMGG00000002260	scrt1b	96	63.961	ENSORLG00015005524	scrt2	97	63.961	Oryzias_latipes_hsok
ENSPMGG00000002260	scrt1b	100	92.500	ENSOMEG00000003925	scrt1b	100	92.500	Oryzias_melastigma
ENSPMGG00000002260	scrt1b	96	64.286	ENSOMEG00000002661	scrt2	97	64.286	Oryzias_melastigma
ENSPMGG00000002260	scrt1b	99	73.490	ENSOMEG00000000286	-	99	73.490	Oryzias_melastigma
ENSPMGG00000002260	scrt1b	100	85.357	ENSPKIG00000020085	scrt1a	100	85.357	Paramormyrops_kingsleyae
ENSPMGG00000002260	scrt1b	100	85.000	ENSPKIG00000022303	SCRT1	100	85.000	Paramormyrops_kingsleyae
ENSPMGG00000002260	scrt1b	96	70.803	ENSPMGG00000016561	scrt2	96	70.803	Periophthalmus_magnuspinnatus
ENSPMGG00000002260	scrt1b	99	71.769	ENSPMGG00000021402	-	99	71.769	Periophthalmus_magnuspinnatus
ENSPMGG00000002260	scrt1b	96	63.430	ENSPFOG00000007738	scrt2	97	63.430	Poecilia_formosa
ENSPMGG00000002260	scrt1b	100	91.786	ENSPFOG00000017719	scrt1b	100	91.786	Poecilia_formosa
ENSPMGG00000002260	scrt1b	99	73.401	ENSPFOG00000005616	-	99	73.401	Poecilia_formosa
ENSPMGG00000002260	scrt1b	100	91.786	ENSPLAG00000009876	scrt1b	100	91.786	Poecilia_latipinna
ENSPMGG00000002260	scrt1b	96	70.438	ENSPLAG00000005765	scrt2	96	70.438	Poecilia_latipinna
ENSPMGG00000002260	scrt1b	99	73.401	ENSPLAG00000011718	-	99	73.401	Poecilia_latipinna
ENSPMGG00000002260	scrt1b	96	70.438	ENSPMEG00000001538	scrt2	96	70.438	Poecilia_mexicana
ENSPMGG00000002260	scrt1b	100	91.786	ENSPMEG00000013274	scrt1b	100	91.786	Poecilia_mexicana
ENSPMGG00000002260	scrt1b	99	73.401	ENSPMEG00000011706	-	99	73.401	Poecilia_mexicana
ENSPMGG00000002260	scrt1b	100	91.786	ENSPREG00000018985	scrt1b	100	91.786	Poecilia_reticulata
ENSPMGG00000002260	scrt1b	99	73.064	ENSPREG00000012166	-	99	73.064	Poecilia_reticulata
ENSPMGG00000002260	scrt1b	96	63.430	ENSPREG00000001147	scrt2	97	63.430	Poecilia_reticulata
ENSPMGG00000002260	scrt1b	100	92.143	ENSPNYG00000017733	scrt1b	100	92.143	Pundamilia_nyererei
ENSPMGG00000002260	scrt1b	99	72.575	ENSPNYG00000008865	-	99	72.575	Pundamilia_nyererei
ENSPMGG00000002260	scrt1b	96	69.231	ENSPNYG00000013109	scrt2	96	69.231	Pundamilia_nyererei
ENSPMGG00000002260	scrt1b	98	81.522	ENSPNAG00000027880	-	99	81.522	Pygocentrus_nattereri
ENSPMGG00000002260	scrt1b	100	82.500	ENSPNAG00000017415	scrt1a	100	82.500	Pygocentrus_nattereri
ENSPMGG00000002260	scrt1b	100	83.929	ENSSFOG00015001195	SCRT1	100	83.929	Scleropages_formosus
ENSPMGG00000002260	scrt1b	99	90.681	ENSSMAG00000019207	scrt1b	99	90.681	Scophthalmus_maximus
ENSPMGG00000002260	scrt1b	99	72.093	ENSSMAG00000005122	-	99	72.093	Scophthalmus_maximus
ENSPMGG00000002260	scrt1b	99	73.579	ENSSDUG00000013215	-	99	73.579	Seriola_dumerili
ENSPMGG00000002260	scrt1b	98	64.646	ENSSDUG00000001637	scrt2	96	64.646	Seriola_dumerili
ENSPMGG00000002260	scrt1b	100	93.214	ENSSDUG00000007752	scrt1b	100	93.214	Seriola_dumerili
ENSPMGG00000002260	scrt1b	99	73.579	ENSSLDG00000016454	-	99	73.579	Seriola_lalandi_dorsalis
ENSPMGG00000002260	scrt1b	100	93.214	ENSSLDG00000017166	scrt1b	100	93.214	Seriola_lalandi_dorsalis
ENSPMGG00000002260	scrt1b	96	62.987	ENSSLDG00000013565	scrt2	97	62.987	Seriola_lalandi_dorsalis
ENSPMGG00000002260	scrt1b	96	66.667	ENSSPUG00000018637	SCRT2	97	66.667	Sphenodon_punctatus
ENSPMGG00000002260	scrt1b	99	71.572	ENSSPAG00000006788	-	99	73.244	Stegastes_partitus
ENSPMGG00000002260	scrt1b	100	93.214	ENSSPAG00000002200	scrt1b	100	93.214	Stegastes_partitus
ENSPMGG00000002260	scrt1b	96	69.597	ENSSPAG00000014018	scrt2	96	69.597	Stegastes_partitus
ENSPMGG00000002260	scrt1b	85	71.861	ENSTGUG00000006801	SCRT2	99	71.861	Taeniopygia_guttata
ENSPMGG00000002260	scrt1b	88	77.049	ENSTRUG00000019558	-	81	77.049	Takifugu_rubripes
ENSPMGG00000002260	scrt1b	96	66.897	ENSTRUG00000007620	scrt2	96	66.897	Takifugu_rubripes
ENSPMGG00000002260	scrt1b	98	89.455	ENSTRUG00000011637	scrt1b	99	89.455	Takifugu_rubripes
ENSPMGG00000002260	scrt1b	99	72.819	ENSTRUG00000012719	-	99	72.819	Takifugu_rubripes
ENSPMGG00000002260	scrt1b	96	69.784	ENSTNIG00000012473	scrt2	97	69.784	Tetraodon_nigroviridis
ENSPMGG00000002260	scrt1b	100	89.286	ENSTNIG00000018384	scrt1b	100	89.286	Tetraodon_nigroviridis
ENSPMGG00000002260	scrt1b	99	74.182	ENSXCOG00000019861	-	99	74.182	Xiphophorus_couchianus
ENSPMGG00000002260	scrt1b	100	91.429	ENSXCOG00000019675	scrt1b	100	91.429	Xiphophorus_couchianus
ENSPMGG00000002260	scrt1b	96	66.554	ENSXCOG00000014367	scrt2	96	66.554	Xiphophorus_couchianus
ENSPMGG00000002260	scrt1b	99	73.064	ENSXMAG00000015353	-	99	73.064	Xiphophorus_maculatus
ENSPMGG00000002260	scrt1b	100	91.429	ENSXMAG00000027885	scrt1b	100	91.429	Xiphophorus_maculatus
ENSPMGG00000002260	scrt1b	96	63.754	ENSXMAG00000028567	scrt2	97	63.754	Xiphophorus_maculatus