EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMGG00000002806 (Gene tree)
Gene ID: -
Gene Symbol: rpusd4
Alias: -
Full Name: RNA pseudouridine synthase D4
Gene Type: protein_coding
Species: Periophthalmus_magnuspinnatus
Status: putative
Strand: Minus strand
Length: 2045 bases
Position: chrKN462005.1:362619-364663
Accession: ZDB-GENE-040801-238
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMGP00000003229	PseudoU_synth_2	PF00849.22	2.1e-25	1	1
ENSPMGP00000003230	PseudoU_synth_2	PF00849.22	4.6e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMGT00000003429	-	1131	-	ENSPMGP00000003230	376 (aa)	-	-
ENSPMGT00000003428	-	1041	-	ENSPMGP00000003229	346 (aa)	-	-

Gene Model

Click here to download ENSPMGG00000002806's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMGG00000002806's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMGG00000002806	rpusd4	89	50.155	ENSG00000165526	RPUSD4	86	49.695	Homo_sapiens
ENSPMGG00000002806	rpusd4	92	69.817	ENSAPOG00000011024	rpusd4	83	71.212	Acanthochromis_polyacanthus
ENSPMGG00000002806	rpusd4	61	53.608	ENSAMEG00000005953	-	94	53.608	Ailuropoda_melanoleuca
ENSPMGG00000002806	rpusd4	90	50.920	ENSAMEG00000000127	-	85	50.920	Ailuropoda_melanoleuca
ENSPMGG00000002806	rpusd4	91	69.304	ENSACIG00000003533	rpusd4	95	69.304	Amphilophus_citrinellus
ENSPMGG00000002806	rpusd4	93	69.277	ENSAOCG00000015409	rpusd4	83	70.659	Amphiprion_ocellaris
ENSPMGG00000002806	rpusd4	93	68.976	ENSAPEG00000018935	rpusd4	83	70.359	Amphiprion_percula
ENSPMGG00000002806	rpusd4	99	65.344	ENSATEG00000008059	rpusd4	94	65.344	Anabas_testudineus
ENSPMGG00000002806	rpusd4	78	50.000	ENSAPLG00000013250	RPUSD4	96	50.177	Anas_platyrhynchos
ENSPMGG00000002806	rpusd4	90	50.453	ENSACAG00000000189	RPUSD4	89	50.150	Anolis_carolinensis
ENSPMGG00000002806	rpusd4	91	48.476	ENSANAG00000024050	RPUSD4	87	48.632	Aotus_nancymaae
ENSPMGG00000002806	rpusd4	95	67.552	ENSACLG00000020996	rpusd4	91	66.852	Astatotilapia_calliptera
ENSPMGG00000002806	rpusd4	91	53.776	ENSAMXG00000031479	rpusd4	93	53.916	Astyanax_mexicanus
ENSPMGG00000002806	rpusd4	91	49.091	ENSBTAG00000020900	RPUSD4	86	49.245	Bos_taurus
ENSPMGG00000002806	rpusd4	97	47.293	ENSCJAG00000042850	RPUSD4	86	47.293	Callithrix_jacchus
ENSPMGG00000002806	rpusd4	85	51.148	ENSCAFG00000010488	RPUSD4	85	50.760	Canis_familiaris
ENSPMGG00000002806	rpusd4	85	51.148	ENSCAFG00020010621	RPUSD4	85	50.760	Canis_lupus_dingo
ENSPMGG00000002806	rpusd4	91	48.788	ENSCHIG00000009975	RPUSD4	88	47.674	Capra_hircus
ENSPMGG00000002806	rpusd4	91	50.915	ENSTSYG00000008456	RPUSD4	86	51.064	Carlito_syrichta
ENSPMGG00000002806	rpusd4	68	48.954	ENSCAPG00000006040	RPUSD4	92	48.770	Cavia_aperea
ENSPMGG00000002806	rpusd4	91	50.613	ENSCPOG00000014971	RPUSD4	86	50.765	Cavia_porcellus
ENSPMGG00000002806	rpusd4	91	49.085	ENSCCAG00000027838	RPUSD4	87	49.240	Cebus_capucinus
ENSPMGG00000002806	rpusd4	91	47.561	ENSCATG00000041570	RPUSD4	86	47.720	Cercocebus_atys
ENSPMGG00000002806	rpusd4	91	51.829	ENSCLAG00000016553	RPUSD4	86	51.976	Chinchilla_lanigera
ENSPMGG00000002806	rpusd4	98	45.161	ENSCSAG00000002274	RPUSD4	90	45.161	Chlorocebus_sabaeus
ENSPMGG00000002806	rpusd4	75	50.554	ENSCHOG00000010249	RPUSD4	94	50.735	Choloepus_hoffmanni
ENSPMGG00000002806	rpusd4	80	49.827	ENSCPBG00000011175	RPUSD4	99	49.827	Chrysemys_picta_bellii
ENSPMGG00000002806	rpusd4	75	38.929	ENSCSAVG00000000872	-	54	38.929	Ciona_savignyi
ENSPMGG00000002806	rpusd4	91	47.866	ENSCANG00000039684	RPUSD4	95	45.730	Colobus_angolensis_palliatus
ENSPMGG00000002806	rpusd4	91	50.610	ENSCGRG00001024141	Rpusd4	86	50.760	Cricetulus_griseus_chok1gshd
ENSPMGG00000002806	rpusd4	91	50.610	ENSCGRG00000014415	Rpusd4	86	50.760	Cricetulus_griseus_crigri
ENSPMGG00000002806	rpusd4	55	56.098	ENSCSEG00000006462	-	87	56.098	Cynoglossus_semilaevis
ENSPMGG00000002806	rpusd4	97	64.756	ENSCVAG00000000392	rpusd4	99	64.756	Cyprinodon_variegatus
ENSPMGG00000002806	rpusd4	92	67.674	ENSCVAG00000008761	rpusd4	96	63.395	Cyprinodon_variegatus
ENSPMGG00000002806	rpusd4	89	56.075	ENSDARG00000012674	rpusd4	96	54.179	Danio_rerio
ENSPMGG00000002806	rpusd4	92	48.949	ENSDNOG00000020026	RPUSD4	87	49.102	Dasypus_novemcinctus
ENSPMGG00000002806	rpusd4	91	49.085	ENSDORG00000016717	Rpusd4	86	49.695	Dipodomys_ordii
ENSPMGG00000002806	rpusd4	90	49.221	ENSETEG00000013953	RPUSD4	85	49.226	Echinops_telfairi
ENSPMGG00000002806	rpusd4	91	49.695	ENSEASG00005022982	RPUSD4	86	49.848	Equus_asinus_asinus
ENSPMGG00000002806	rpusd4	91	49.695	ENSECAG00000000557	RPUSD4	86	49.848	Equus_caballus
ENSPMGG00000002806	rpusd4	71	55.172	ENSEEUG00000014036	RPUSD4	66	55.172	Erinaceus_europaeus
ENSPMGG00000002806	rpusd4	93	59.116	ENSELUG00000008075	rpusd4	93	59.116	Esox_lucius
ENSPMGG00000002806	rpusd4	97	47.851	ENSFCAG00000029789	RPUSD4	90	48.711	Felis_catus
ENSPMGG00000002806	rpusd4	94	47.024	ENSFALG00000005171	RPUSD4	99	47.024	Ficedula_albicollis
ENSPMGG00000002806	rpusd4	93	47.887	ENSFDAG00000014307	RPUSD4	93	47.887	Fukomys_damarensis
ENSPMGG00000002806	rpusd4	98	64.171	ENSFHEG00000004329	rpusd4	95	64.171	Fundulus_heteroclitus
ENSPMGG00000002806	rpusd4	91	62.037	ENSGMOG00000017726	rpusd4	98	61.818	Gadus_morhua
ENSPMGG00000002806	rpusd4	79	52.281	ENSGALG00000024326	RPUSD4	97	46.459	Gallus_gallus
ENSPMGG00000002806	rpusd4	99	61.257	ENSGAFG00000021559	rpusd4	96	61.257	Gambusia_affinis
ENSPMGG00000002806	rpusd4	91	65.846	ENSGACG00000001657	rpusd4	97	68.459	Gasterosteus_aculeatus
ENSPMGG00000002806	rpusd4	94	45.682	ENSGAGG00000000132	RPUSD4	97	45.682	Gopherus_agassizii
ENSPMGG00000002806	rpusd4	89	51.084	ENSGGOG00000016494	RPUSD4	86	50.610	Gorilla_gorilla
ENSPMGG00000002806	rpusd4	95	67.552	ENSHBUG00000022838	rpusd4	99	63.520	Haplochromis_burtoni
ENSPMGG00000002806	rpusd4	94	49.565	ENSHGLG00000002285	RPUSD4	91	49.288	Heterocephalus_glaber_female
ENSPMGG00000002806	rpusd4	94	49.565	ENSHGLG00100006385	RPUSD4	91	49.288	Heterocephalus_glaber_male
ENSPMGG00000002806	rpusd4	94	66.366	ENSHCOG00000006612	rpusd4	86	67.463	Hippocampus_comes
ENSPMGG00000002806	rpusd4	91	55.963	ENSIPUG00000023879	rusd4	83	56.098	Ictalurus_punctatus
ENSPMGG00000002806	rpusd4	98	47.714	ENSSTOG00000025280	RPUSD4	94	47.714	Ictidomys_tridecemlineatus
ENSPMGG00000002806	rpusd4	89	51.090	ENSJJAG00000018673	Rpusd4	86	51.242	Jaculus_jaculus
ENSPMGG00000002806	rpusd4	92	67.576	ENSKMAG00000021805	rpusd4	86	69.277	Kryptolebias_marmoratus
ENSPMGG00000002806	rpusd4	92	69.880	ENSLBEG00000020394	rpusd4	92	71.084	Labrus_bergylta
ENSPMGG00000002806	rpusd4	90	51.553	ENSLACG00000011028	RPUSD4	81	51.703	Latimeria_chalumnae
ENSPMGG00000002806	rpusd4	89	42.991	ENSLOCG00000003124	rpusd4	88	42.560	Lepisosteus_oculatus
ENSPMGG00000002806	rpusd4	89	50.000	ENSLAFG00000005211	RPUSD4	99	42.808	Loxodonta_africana
ENSPMGG00000002806	rpusd4	91	48.171	ENSMFAG00000039513	RPUSD4	86	48.328	Macaca_fascicularis
ENSPMGG00000002806	rpusd4	91	47.866	ENSMMUG00000007933	RPUSD4	86	48.024	Macaca_mulatta
ENSPMGG00000002806	rpusd4	91	48.171	ENSMNEG00000027414	RPUSD4	86	48.328	Macaca_nemestrina
ENSPMGG00000002806	rpusd4	91	48.171	ENSMLEG00000042461	RPUSD4	86	48.328	Mandrillus_leucophaeus
ENSPMGG00000002806	rpusd4	93	68.249	ENSMAMG00000023839	rpusd4	88	69.322	Mastacembelus_armatus
ENSPMGG00000002806	rpusd4	95	67.552	ENSMZEG00005011999	rpusd4	91	66.852	Maylandia_zebra
ENSPMGG00000002806	rpusd4	78	51.237	ENSMGAG00000000840	RPUSD4	99	48.624	Meleagris_gallopavo
ENSPMGG00000002806	rpusd4	91	49.695	ENSMAUG00000010280	Rpusd4	86	49.848	Mesocricetus_auratus
ENSPMGG00000002806	rpusd4	91	49.695	ENSMICG00000015979	RPUSD4	89	51.495	Microcebus_murinus
ENSPMGG00000002806	rpusd4	91	48.780	ENSMOCG00000000661	Rpusd4	86	48.936	Microtus_ochrogaster
ENSPMGG00000002806	rpusd4	87	71.104	ENSMMOG00000021731	rpusd4	93	71.104	Mola_mola
ENSPMGG00000002806	rpusd4	86	51.282	ENSMODG00000004521	RPUSD4	79	51.438	Monodelphis_domestica
ENSPMGG00000002806	rpusd4	86	69.381	ENSMALG00000005839	rpusd4	95	70.570	Monopterus_albus
ENSPMGG00000002806	rpusd4	95	46.703	MGP_CAROLIEiJ_G0031954	Rpusd4	90	46.703	Mus_caroli
ENSPMGG00000002806	rpusd4	95	47.253	ENSMUSG00000032044	Rpusd4	90	47.253	Mus_musculus
ENSPMGG00000002806	rpusd4	91	50.000	MGP_PahariEiJ_G0014819	Rpusd4	86	50.152	Mus_pahari
ENSPMGG00000002806	rpusd4	95	48.256	MGP_SPRETEiJ_G0033078	Rpusd4	90	48.256	Mus_spretus
ENSPMGG00000002806	rpusd4	91	50.000	ENSMPUG00000006608	RPUSD4	86	50.152	Mustela_putorius_furo
ENSPMGG00000002806	rpusd4	72	49.012	ENSMLUG00000029348	-	97	49.012	Myotis_lucifugus
ENSPMGG00000002806	rpusd4	88	49.686	ENSMLUG00000017328	-	83	49.843	Myotis_lucifugus
ENSPMGG00000002806	rpusd4	91	51.524	ENSNGAG00000020847	Rpusd4	86	51.672	Nannospalax_galili
ENSPMGG00000002806	rpusd4	91	68.111	ENSNBRG00000005207	rpusd4	94	69.846	Neolamprologus_brichardi
ENSPMGG00000002806	rpusd4	91	49.085	ENSNLEG00000007465	RPUSD4	93	46.779	Nomascus_leucogenys
ENSPMGG00000002806	rpusd4	91	49.240	ENSMEUG00000004370	RPUSD4	87	49.394	Notamacropus_eugenii
ENSPMGG00000002806	rpusd4	91	49.848	ENSODEG00000004577	RPUSD4	92	48.442	Octodon_degus
ENSPMGG00000002806	rpusd4	96	67.536	ENSONIG00000018879	rpusd4	90	70.746	Oreochromis_niloticus
ENSPMGG00000002806	rpusd4	80	50.342	ENSOANG00000007247	RPUSD4	91	50.342	Ornithorhynchus_anatinus
ENSPMGG00000002806	rpusd4	93	50.149	ENSOCUG00000017039	RPUSD4	87	50.298	Oryctolagus_cuniculus
ENSPMGG00000002806	rpusd4	91	62.654	ENSORLG00000002750	rpusd4	90	63.077	Oryzias_latipes
ENSPMGG00000002806	rpusd4	92	62.727	ENSORLG00020002044	rpusd4	83	64.157	Oryzias_latipes_hni
ENSPMGG00000002806	rpusd4	92	62.121	ENSORLG00015020034	rpusd4	83	63.554	Oryzias_latipes_hsok
ENSPMGG00000002806	rpusd4	94	66.168	ENSOMEG00000004861	rpusd4	82	67.262	Oryzias_melastigma
ENSPMGG00000002806	rpusd4	89	51.084	ENSOGAG00000008922	RPUSD4	85	51.064	Otolemur_garnettii
ENSPMGG00000002806	rpusd4	91	48.788	ENSOARG00000012238	RPUSD4	88	47.674	Ovis_aries
ENSPMGG00000002806	rpusd4	89	50.155	ENSPPAG00000042883	RPUSD4	80	49.695	Pan_paniscus
ENSPMGG00000002806	rpusd4	97	48.711	ENSPPRG00000003081	RPUSD4	90	48.711	Panthera_pardus
ENSPMGG00000002806	rpusd4	97	48.711	ENSPTIG00000012059	RPUSD4	90	48.711	Panthera_tigris_altaica
ENSPMGG00000002806	rpusd4	89	50.155	ENSPTRG00000004454	RPUSD4	86	49.695	Pan_troglodytes
ENSPMGG00000002806	rpusd4	91	47.866	ENSPANG00000015040	RPUSD4	86	48.024	Papio_anubis
ENSPMGG00000002806	rpusd4	96	50.685	ENSPKIG00000023986	rpusd4	92	50.685	Paramormyrops_kingsleyae
ENSPMGG00000002806	rpusd4	84	49.835	ENSPSIG00000014268	RPUSD4	95	50.000	Pelodiscus_sinensis
ENSPMGG00000002806	rpusd4	91	42.988	ENSPEMG00000000278	Rpusd4	85	43.465	Peromyscus_maniculatus_bairdii
ENSPMGG00000002806	rpusd4	82	37.888	ENSPMAG00000008183	rpusd4	97	36.418	Petromyzon_marinus
ENSPMGG00000002806	rpusd4	91	49.390	ENSPCIG00000010212	RPUSD4	89	49.544	Phascolarctos_cinereus
ENSPMGG00000002806	rpusd4	94	65.789	ENSPFOG00000019030	rpusd4	90	65.988	Poecilia_formosa
ENSPMGG00000002806	rpusd4	94	66.471	ENSPLAG00000016848	rpusd4	87	66.959	Poecilia_latipinna
ENSPMGG00000002806	rpusd4	94	65.882	ENSPMEG00000017534	rpusd4	87	66.082	Poecilia_mexicana
ENSPMGG00000002806	rpusd4	91	65.964	ENSPREG00000005689	rpusd4	86	66.168	Poecilia_reticulata
ENSPMGG00000002806	rpusd4	91	49.085	ENSPPYG00000004043	RPUSD4	86	49.085	Pongo_abelii
ENSPMGG00000002806	rpusd4	72	53.333	ENSPCAG00000000753	RPUSD4	68	53.333	Procavia_capensis
ENSPMGG00000002806	rpusd4	91	48.750	ENSPCOG00000020694	RPUSD4	86	48.750	Propithecus_coquereli
ENSPMGG00000002806	rpusd4	90	50.769	ENSPVAG00000000988	RPUSD4	86	50.920	Pteropus_vampyrus
ENSPMGG00000002806	rpusd4	97	65.860	ENSPNYG00000009652	rpusd4	95	65.860	Pundamilia_nyererei
ENSPMGG00000002806	rpusd4	93	54.790	ENSPNAG00000012264	rpusd4	88	54.925	Pygocentrus_nattereri
ENSPMGG00000002806	rpusd4	91	50.915	ENSRNOG00000011567	Rpusd4	86	51.064	Rattus_norvegicus
ENSPMGG00000002806	rpusd4	89	48.607	ENSRBIG00000034842	RPUSD4	86	48.024	Rhinopithecus_bieti
ENSPMGG00000002806	rpusd4	89	48.607	ENSRROG00000039753	RPUSD4	86	48.024	Rhinopithecus_roxellana
ENSPMGG00000002806	rpusd4	91	48.780	ENSSBOG00000030413	RPUSD4	87	48.936	Saimiri_boliviensis_boliviensis
ENSPMGG00000002806	rpusd4	85	49.508	ENSSHAG00000008304	RPUSD4	99	49.673	Sarcophilus_harrisii
ENSPMGG00000002806	rpusd4	95	52.754	ENSSFOG00015006203	rpusd4	92	52.754	Scleropages_formosus
ENSPMGG00000002806	rpusd4	92	70.336	ENSSMAG00000020978	rpusd4	86	70.846	Scophthalmus_maximus
ENSPMGG00000002806	rpusd4	93	70.482	ENSSDUG00000013399	rpusd4	88	71.856	Seriola_dumerili
ENSPMGG00000002806	rpusd4	93	70.783	ENSSLDG00000023507	rpusd4	88	72.455	Seriola_lalandi_dorsalis
ENSPMGG00000002806	rpusd4	83	53.020	ENSSPUG00000001401	RPUSD4	95	49.153	Sphenodon_punctatus
ENSPMGG00000002806	rpusd4	92	66.970	ENSSPAG00000012163	rpusd4	85	68.373	Stegastes_partitus
ENSPMGG00000002806	rpusd4	89	50.155	ENSSSCG00000015233	RPUSD4	84	50.309	Sus_scrofa
ENSPMGG00000002806	rpusd4	84	52.013	ENSTGUG00000000773	RPUSD4	99	51.495	Taeniopygia_guttata
ENSPMGG00000002806	rpusd4	97	62.108	ENSTRUG00000012283	rpusd4	93	62.983	Takifugu_rubripes
ENSPMGG00000002806	rpusd4	94	64.970	ENSTNIG00000014676	rpusd4	86	66.071	Tetraodon_nigroviridis
ENSPMGG00000002806	rpusd4	89	49.845	ENSTTRG00000001555	RPUSD4	84	50.000	Tursiops_truncatus
ENSPMGG00000002806	rpusd4	89	51.393	ENSUMAG00000002219	RPUSD4	84	51.543	Ursus_maritimus
ENSPMGG00000002806	rpusd4	71	44.488	ENSVPAG00000001066	RPUSD4	93	44.488	Vicugna_pacos
ENSPMGG00000002806	rpusd4	85	51.148	ENSVVUG00000020101	RPUSD4	85	50.760	Vulpes_vulpes
ENSPMGG00000002806	rpusd4	93	65.976	ENSXCOG00000004676	rpusd4	99	59.847	Xiphophorus_couchianus
ENSPMGG00000002806	rpusd4	99	60.358	ENSXMAG00000023351	rpusd4	99	60.358	Xiphophorus_maculatus