EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMGG00000002841 (Gene tree)
Gene ID: -
Gene Symbol: srrt
Alias: -
Full Name: serrate RNA effector molecule homolog (Arabidopsis)
Gene Type: protein_coding
Species: Periophthalmus_magnuspinnatus
Status: putative
Strand: Plus strand
Length: 6551 bases
Position: chrKN467007.1:361370-367920
Accession: ZDB-GENE-020419-13
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMGP00000003273	ARS2	PF04959.13	1e-88	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMGT00000003474	-	2460	-	ENSPMGP00000003273	819 (aa)	-	-

Gene Model

Click here to download ENSPMGG00000002841's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMGG00000002841's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMGG00000002841	srrt	56	74.675	ENSG00000087087	SRRT	98	90.323	Homo_sapiens
ENSPMGG00000002841	srrt	88	89.892	ENSAPOG00000002304	srrt	98	79.858	Acanthochromis_polyacanthus
ENSPMGG00000002841	srrt	56	74.620	ENSAMEG00000014506	SRRT	51	74.620	Ailuropoda_melanoleuca
ENSPMGG00000002841	srrt	95	81.911	ENSACIG00000015795	srrt	98	82.484	Amphilophus_citrinellus
ENSPMGG00000002841	srrt	89	89.892	ENSAOCG00000009693	srrt	98	82.404	Amphiprion_ocellaris
ENSPMGG00000002841	srrt	89	89.462	ENSAPEG00000003646	srrt	97	82.010	Amphiprion_percula
ENSPMGG00000002841	srrt	62	59.203	ENSATEG00000003652	-	85	63.753	Anabas_testudineus
ENSPMGG00000002841	srrt	95	80.755	ENSATEG00000014425	srrt	98	81.640	Anabas_testudineus
ENSPMGG00000002841	srrt	57	72.128	ENSACAG00000001014	SRRT	98	64.603	Anolis_carolinensis
ENSPMGG00000002841	srrt	56	74.194	ENSANAG00000031718	SRRT	53	74.194	Aotus_nancymaae
ENSPMGG00000002841	srrt	82	63.445	ENSACLG00000009423	-	78	63.734	Astatotilapia_calliptera
ENSPMGG00000002841	srrt	55	78.556	ENSAMXG00000016671	srrt	95	68.925	Astyanax_mexicanus
ENSPMGG00000002841	srrt	56	73.978	ENSBTAG00000001134	SRRT	53	73.978	Bos_taurus
ENSPMGG00000002841	srrt	69	40.401	WBGene00017085	E01A2.2	85	41.701	Caenorhabditis_elegans
ENSPMGG00000002841	srrt	56	73.548	ENSCJAG00000014917	SRRT	53	73.978	Callithrix_jacchus
ENSPMGG00000002841	srrt	96	64.014	ENSCAFG00000023538	SRRT	53	73.978	Canis_familiaris
ENSPMGG00000002841	srrt	98	63.337	ENSCAFG00020013358	SRRT	97	63.263	Canis_lupus_dingo
ENSPMGG00000002841	srrt	56	74.459	ENSCHIG00000010495	SRRT	80	74.459	Capra_hircus
ENSPMGG00000002841	srrt	56	74.187	ENSCAPG00000013586	SRRT	89	70.638	Cavia_aperea
ENSPMGG00000002841	srrt	56	73.391	ENSCPOG00000001739	SRRT	96	64.539	Cavia_porcellus
ENSPMGG00000002841	srrt	56	74.194	ENSCCAG00000015877	SRRT	53	74.194	Cebus_capucinus
ENSPMGG00000002841	srrt	96	64.855	ENSCLAG00000007568	SRRT	89	71.092	Chinchilla_lanigera
ENSPMGG00000002841	srrt	54	76.296	ENSCHOG00000007815	SRRT	65	68.489	Choloepus_hoffmanni
ENSPMGG00000002841	srrt	74	74.561	ENSCPBG00000011553	SRRT	87	67.931	Chrysemys_picta_bellii
ENSPMGG00000002841	srrt	100	41.750	ENSCING00000003506	-	54	50.312	Ciona_intestinalis
ENSPMGG00000002841	srrt	93	49.784	ENSCSAVG00000008394	-	97	44.769	Ciona_savignyi
ENSPMGG00000002841	srrt	56	72.473	ENSCGRG00001001594	Srrt	96	65.202	Cricetulus_griseus_chok1gshd
ENSPMGG00000002841	srrt	74	79.739	ENSCGRG00000007292	Srrt	89	71.306	Cricetulus_griseus_crigri
ENSPMGG00000002841	srrt	62	60.878	ENSCSEG00000005233	-	54	64.009	Cynoglossus_semilaevis
ENSPMGG00000002841	srrt	89	56.516	ENSCVAG00000017344	-	96	56.608	Cyprinodon_variegatus
ENSPMGG00000002841	srrt	95	78.288	ENSCVAG00000019848	srrt	54	87.473	Cyprinodon_variegatus
ENSPMGG00000002841	srrt	94	81.974	ENSDARG00000017762	srrt	83	83.585	Danio_rerio
ENSPMGG00000002841	srrt	56	74.194	ENSDNOG00000003851	SRRT	53	74.194	Dasypus_novemcinctus
ENSPMGG00000002841	srrt	56	71.706	ENSDORG00000005584	Srrt	89	71.706	Dipodomys_ordii
ENSPMGG00000002841	srrt	100	49.318	FBgn0033062	Ars2	71	51.477	Drosophila_melanogaster
ENSPMGG00000002841	srrt	79	72.093	ENSETEG00000016175	SRRT	68	73.600	Echinops_telfairi
ENSPMGG00000002841	srrt	76	54.589	ENSEBUG00000008517	-	65	60.934	Eptatretus_burgeri
ENSPMGG00000002841	srrt	56	74.194	ENSEASG00005016956	SRRT	53	74.194	Equus_asinus_asinus
ENSPMGG00000002841	srrt	56	74.194	ENSECAG00000012292	SRRT	53	74.194	Equus_caballus
ENSPMGG00000002841	srrt	59	73.958	ENSEEUG00000009117	SRRT	59	75.000	Erinaceus_europaeus
ENSPMGG00000002841	srrt	92	56.563	ENSELUG00000021216	-	96	56.647	Esox_lucius
ENSPMGG00000002841	srrt	96	63.971	ENSFCAG00000006855	SRRT	53	74.194	Felis_catus
ENSPMGG00000002841	srrt	56	69.197	ENSFDAG00000021347	SRRT	88	66.594	Fukomys_damarensis
ENSPMGG00000002841	srrt	82	85.036	ENSFHEG00000002756	srrt	91	89.057	Fundulus_heteroclitus
ENSPMGG00000002841	srrt	57	56.674	ENSFHEG00000004105	-	93	56.632	Fundulus_heteroclitus
ENSPMGG00000002841	srrt	87	65.324	ENSGMOG00000018694	-	84	64.588	Gadus_morhua
ENSPMGG00000002841	srrt	95	70.686	ENSGMOG00000018619	srrt	85	78.959	Gadus_morhua
ENSPMGG00000002841	srrt	56	86.853	ENSGAFG00000005423	srrt	98	77.739	Gambusia_affinis
ENSPMGG00000002841	srrt	92	56.061	ENSGAFG00000020383	-	96	56.273	Gambusia_affinis
ENSPMGG00000002841	srrt	95	75.850	ENSGACG00000020387	srrt	98	72.976	Gasterosteus_aculeatus
ENSPMGG00000002841	srrt	57	60.549	ENSGACG00000001100	-	52	61.505	Gasterosteus_aculeatus
ENSPMGG00000002841	srrt	56	74.675	ENSGGOG00000001508	SRRT	62	69.681	Gorilla_gorilla
ENSPMGG00000002841	srrt	89	89.201	ENSHBUG00000002942	srrt	94	78.035	Haplochromis_burtoni
ENSPMGG00000002841	srrt	56	73.876	ENSHGLG00000008344	Srrt	89	70.878	Heterocephalus_glaber_female
ENSPMGG00000002841	srrt	56	74.459	ENSHGLG00100018857	Srrt	89	71.429	Heterocephalus_glaber_male
ENSPMGG00000002841	srrt	98	79.203	ENSHCOG00000005403	srrt	98	79.328	Hippocampus_comes
ENSPMGG00000002841	srrt	92	56.499	ENSHCOG00000008904	-	93	56.371	Hippocampus_comes
ENSPMGG00000002841	srrt	56	74.675	ENSSTOG00000013776	SRRT	53	74.675	Ictidomys_tridecemlineatus
ENSPMGG00000002841	srrt	96	63.270	ENSJJAG00000010446	Srrt	89	72.078	Jaculus_jaculus
ENSPMGG00000002841	srrt	95	79.474	ENSKMAG00000013599	srrt	98	81.220	Kryptolebias_marmoratus
ENSPMGG00000002841	srrt	56	62.397	ENSKMAG00000008468	-	96	55.128	Kryptolebias_marmoratus
ENSPMGG00000002841	srrt	92	88.095	ENSLBEG00000016308	srrt	89	89.394	Labrus_bergylta
ENSPMGG00000002841	srrt	53	64.726	ENSLBEG00000028983	-	70	66.431	Labrus_bergylta
ENSPMGG00000002841	srrt	73	84.314	ENSLOCG00000013658	srrt	82	70.000	Lepisosteus_oculatus
ENSPMGG00000002841	srrt	56	74.409	ENSLAFG00000007725	SRRT	96	65.912	Loxodonta_africana
ENSPMGG00000002841	srrt	56	87.742	ENSMAMG00000014311	srrt	52	89.849	Mastacembelus_armatus
ENSPMGG00000002841	srrt	81	60.526	ENSMAMG00000010681	-	81	64.807	Mastacembelus_armatus
ENSPMGG00000002841	srrt	82	63.655	ENSMZEG00005028002	-	78	63.948	Maylandia_zebra
ENSPMGG00000002841	srrt	56	72.258	ENSMAUG00000011386	Srrt	96	65.595	Mesocricetus_auratus
ENSPMGG00000002841	srrt	56	72.473	ENSMOCG00000001971	Srrt	96	66.269	Microtus_ochrogaster
ENSPMGG00000002841	srrt	95	79.506	ENSMMOG00000016399	srrt	98	79.904	Mola_mola
ENSPMGG00000002841	srrt	82	56.868	ENSMMOG00000011137	-	73	65.293	Mola_mola
ENSPMGG00000002841	srrt	56	69.280	ENSMODG00000004862	SRRT	89	70.464	Monodelphis_domestica
ENSPMGG00000002841	srrt	87	74.520	ENSMALG00000018604	srrt	97	71.864	Monopterus_albus
ENSPMGG00000002841	srrt	69	46.181	ENSMALG00000005567	-	100	46.181	Monopterus_albus
ENSPMGG00000002841	srrt	56	72.885	MGP_CAROLIEiJ_G0027870	Srrt	99	74.532	Mus_caroli
ENSPMGG00000002841	srrt	56	72.885	ENSMUSG00000037364	Srrt	99	74.532	Mus_musculus
ENSPMGG00000002841	srrt	56	72.885	MGP_PahariEiJ_G0024456	Srrt	99	74.532	Mus_pahari
ENSPMGG00000002841	srrt	56	72.885	MGP_SPRETEiJ_G0028875	Srrt	99	74.532	Mus_spretus
ENSPMGG00000002841	srrt	96	63.971	ENSMPUG00000015839	SRRT	53	74.194	Mustela_putorius_furo
ENSPMGG00000002841	srrt	56	72.258	ENSMLUG00000009975	SRRT	53	73.978	Myotis_lucifugus
ENSPMGG00000002841	srrt	56	72.473	ENSNGAG00000023715	Srrt	100	63.438	Nannospalax_galili
ENSPMGG00000002841	srrt	92	65.410	ENSNLEG00000011987	SRRT	88	64.912	Nomascus_leucogenys
ENSPMGG00000002841	srrt	96	54.028	ENSMEUG00000011941	SRRT	81	61.853	Notamacropus_eugenii
ENSPMGG00000002841	srrt	66	73.485	ENSOPRG00000002502	-	67	78.626	Ochotona_princeps
ENSPMGG00000002841	srrt	56	71.645	ENSODEG00000016856	SRRT	96	65.833	Octodon_degus
ENSPMGG00000002841	srrt	92	54.031	ENSONIG00000016080	-	75	66.827	Oreochromis_niloticus
ENSPMGG00000002841	srrt	92	89.440	ENSONIG00000004242	srrt	98	74.914	Oreochromis_niloticus
ENSPMGG00000002841	srrt	98	76.014	ENSORLG00000008120	srrt	85	86.393	Oryzias_latipes
ENSPMGG00000002841	srrt	92	59.125	ENSOMEG00000006963	-	96	58.646	Oryzias_melastigma
ENSPMGG00000002841	srrt	98	82.090	ENSOMEG00000003155	srrt	98	80.669	Oryzias_melastigma
ENSPMGG00000002841	srrt	56	74.194	ENSOGAG00000017242	SRRT	53	74.194	Otolemur_garnettii
ENSPMGG00000002841	srrt	56	74.459	ENSOARG00000015645	SRRT	53	74.459	Ovis_aries
ENSPMGG00000002841	srrt	56	74.675	ENSPPAG00000041090	SRRT	83	70.886	Pan_paniscus
ENSPMGG00000002841	srrt	96	64.081	ENSPPRG00000009557	SRRT	53	74.026	Panthera_pardus
ENSPMGG00000002841	srrt	96	63.971	ENSPTIG00000014355	SRRT	53	74.194	Panthera_tigris_altaica
ENSPMGG00000002841	srrt	56	74.675	ENSPTRG00000019511	SRRT	53	74.675	Pan_troglodytes
ENSPMGG00000002841	srrt	98	70.624	ENSPKIG00000005434	srrt	98	69.663	Paramormyrops_kingsleyae
ENSPMGG00000002841	srrt	94	68.447	ENSPKIG00000022212	-	98	69.778	Paramormyrops_kingsleyae
ENSPMGG00000002841	srrt	56	73.434	ENSPSIG00000016311	SRRT	98	64.953	Pelodiscus_sinensis
ENSPMGG00000002841	srrt	56	72.885	ENSPEMG00000010834	Srrt	96	66.029	Peromyscus_maniculatus_bairdii
ENSPMGG00000002841	srrt	96	55.569	ENSPMAG00000009614	-	95	54.479	Petromyzon_marinus
ENSPMGG00000002841	srrt	56	72.281	ENSPCIG00000000816	SRRT	96	64.817	Phascolarctos_cinereus
ENSPMGG00000002841	srrt	92	55.696	ENSPFOG00000016554	-	96	55.487	Poecilia_formosa
ENSPMGG00000002841	srrt	56	87.097	ENSPFOG00000005704	srrt	98	76.843	Poecilia_formosa
ENSPMGG00000002841	srrt	56	86.452	ENSPLAG00000021992	srrt	98	77.765	Poecilia_latipinna
ENSPMGG00000002841	srrt	92	56.051	ENSPLAG00000004526	-	96	55.831	Poecilia_latipinna
ENSPMGG00000002841	srrt	88	54.813	ENSPMEG00000001520	-	94	54.639	Poecilia_mexicana
ENSPMGG00000002841	srrt	56	86.667	ENSPMEG00000001182	srrt	98	76.674	Poecilia_mexicana
ENSPMGG00000002841	srrt	95	76.387	ENSPREG00000022308	srrt	98	75.402	Poecilia_reticulata
ENSPMGG00000002841	srrt	57	69.032	ENSPPYG00000017432	SRRT	95	69.032	Pongo_abelii
ENSPMGG00000002841	srrt	56	74.675	ENSPCOG00000025751	SRRT	53	74.675	Propithecus_coquereli
ENSPMGG00000002841	srrt	75	66.667	ENSPVAG00000000834	SRRT	68	66.667	Pteropus_vampyrus
ENSPMGG00000002841	srrt	89	89.201	ENSPNYG00000018710	srrt	98	78.035	Pundamilia_nyererei
ENSPMGG00000002841	srrt	77	87.975	ENSPNAG00000010629	srrt	72	86.188	Pygocentrus_nattereri
ENSPMGG00000002841	srrt	56	62.716	ENSRNOG00000048277	AABR07035787.1	92	64.440	Rattus_norvegicus
ENSPMGG00000002841	srrt	56	74.194	ENSRBIG00000035718	SRRT	66	69.780	Rhinopithecus_bieti
ENSPMGG00000002841	srrt	56	74.194	ENSRROG00000030622	SRRT	66	69.780	Rhinopithecus_roxellana
ENSPMGG00000002841	srrt	56	74.675	ENSSBOG00000033570	SRRT	79	74.675	Saimiri_boliviensis_boliviensis
ENSPMGG00000002841	srrt	58	70.757	ENSSHAG00000007349	-	99	61.129	Sarcophilus_harrisii
ENSPMGG00000002841	srrt	94	82.174	ENSSFOG00015017293	srrt	98	72.336	Scleropages_formosus
ENSPMGG00000002841	srrt	95	80.702	ENSSMAG00000015342	srrt	98	80.708	Scophthalmus_maximus
ENSPMGG00000002841	srrt	56	62.017	ENSSMAG00000018195	-	95	55.283	Scophthalmus_maximus
ENSPMGG00000002841	srrt	56	89.032	ENSSDUG00000012049	srrt	98	82.024	Seriola_dumerili
ENSPMGG00000002841	srrt	56	54.375	ENSSDUG00000002051	-	93	53.684	Seriola_dumerili
ENSPMGG00000002841	srrt	89	87.905	ENSSLDG00000017477	srrt	89	89.154	Seriola_lalandi_dorsalis
ENSPMGG00000002841	srrt	89	89.056	ENSSPAG00000005665	srrt	84	89.056	Stegastes_partitus
ENSPMGG00000002841	srrt	56	57.112	ENSSPAG00000018943	-	93	56.710	Stegastes_partitus
ENSPMGG00000002841	srrt	53	73.363	ENSSSCG00000024789	SRRT	98	63.171	Sus_scrofa
ENSPMGG00000002841	srrt	90	54.124	ENSTRUG00000000023	-	51	59.862	Takifugu_rubripes
ENSPMGG00000002841	srrt	96	83.652	ENSTRUG00000016075	srrt	98	75.316	Takifugu_rubripes
ENSPMGG00000002841	srrt	92	53.178	ENSTNIG00000003111	-	53	62.260	Tetraodon_nigroviridis
ENSPMGG00000002841	srrt	73	69.102	ENSTNIG00000011779	srrt	84	83.857	Tetraodon_nigroviridis
ENSPMGG00000002841	srrt	62	76.596	ENSTBEG00000005212	SRRT	57	76.596	Tupaia_belangeri
ENSPMGG00000002841	srrt	56	74.194	ENSTTRG00000011104	SRRT	96	65.636	Tursiops_truncatus
ENSPMGG00000002841	srrt	95	63.842	ENSUAMG00000027997	SRRT	81	74.194	Ursus_americanus
ENSPMGG00000002841	srrt	96	63.971	ENSUMAG00000011295	SRRT	53	74.194	Ursus_maritimus
ENSPMGG00000002841	srrt	96	64.014	ENSVVUG00000023572	SRRT	53	73.978	Vulpes_vulpes
ENSPMGG00000002841	srrt	78	75.843	ENSXETG00000025124	srrt	98	57.209	Xenopus_tropicalis
ENSPMGG00000002841	srrt	62	50.392	ENSXCOG00000013105	-	91	52.034	Xiphophorus_couchianus
ENSPMGG00000002841	srrt	92	55.934	ENSXMAG00000002090	-	96	56.585	Xiphophorus_maculatus
ENSPMGG00000002841	srrt	56	86.853	ENSXMAG00000007627	srrt	98	80.373	Xiphophorus_maculatus