EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMGG00000003548 (Gene tree)
Gene ID: -
Gene Symbol: zc3hc1
Alias: -
Full Name: zinc finger%2C C3HC-type containing 1
Gene Type: protein_coding
Species: Periophthalmus_magnuspinnatus
Status: putative
Strand: Plus strand
Length: 6474 bases
Position: chrKN466682.1:11032-17505
Accession: ZDB-GENE-061013-94
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMGP00000004144	zf-C3HC	PF07967.13	1.4e-31	1	1
ENSPMGP00000004146	zf-C3HC	PF07967.13	2.8e-29	1	1
ENSPMGP00000004144	Rsm1	PF08600.10	3e-14	1	1
ENSPMGP00000004146	Rsm1	PF08600.10	4.3e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMGT00000004405	-	1476	-	ENSPMGP00000004146	491 (aa)	-	-
ENSPMGT00000004403	-	1209	-	ENSPMGP00000004144	402 (aa)	-	-

Gene Model

Click here to download ENSPMGG00000003548's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMGG00000003548's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMGG00000003548	zc3hc1	94	41.866	ENSG00000091732	ZC3HC1	94	41.627	Homo_sapiens
ENSPMGG00000003548	zc3hc1	99	67.131	ENSAPOG00000009078	zc3hc1	100	67.131	Acanthochromis_polyacanthus
ENSPMGG00000003548	zc3hc1	95	41.129	ENSAMEG00000005425	ZC3HC1	94	41.331	Ailuropoda_melanoleuca
ENSPMGG00000003548	zc3hc1	99	74.725	ENSACIG00000019513	zc3hc1	95	68.323	Amphilophus_citrinellus
ENSPMGG00000003548	zc3hc1	99	66.932	ENSAOCG00000024310	zc3hc1	100	66.932	Amphiprion_ocellaris
ENSPMGG00000003548	zc3hc1	99	66.932	ENSAPEG00000004907	zc3hc1	100	66.932	Amphiprion_percula
ENSPMGG00000003548	zc3hc1	86	70.068	ENSATEG00000016898	zc3hc1	90	69.841	Anabas_testudineus
ENSPMGG00000003548	zc3hc1	90	41.627	ENSAPLG00000003832	ZC3HC1	96	41.727	Anas_platyrhynchos
ENSPMGG00000003548	zc3hc1	96	48.000	ENSACAG00000001638	ZC3HC1	90	48.000	Anolis_carolinensis
ENSPMGG00000003548	zc3hc1	94	41.388	ENSANAG00000022213	ZC3HC1	94	41.148	Aotus_nancymaae
ENSPMGG00000003548	zc3hc1	86	68.578	ENSACLG00000025033	zc3hc1	94	68.736	Astatotilapia_calliptera
ENSPMGG00000003548	zc3hc1	88	50.787	ENSAMXG00000036792	zc3hc1	92	49.561	Astyanax_mexicanus
ENSPMGG00000003548	zc3hc1	96	40.481	ENSBTAG00000011247	ZC3HC1	95	40.600	Bos_taurus
ENSPMGG00000003548	zc3hc1	94	42.317	ENSCJAG00000010536	ZC3HC1	94	42.080	Callithrix_jacchus
ENSPMGG00000003548	zc3hc1	95	41.331	ENSCAFG00000028735	-	94	40.927	Canis_familiaris
ENSPMGG00000003548	zc3hc1	95	41.851	ENSCAFG00000001499	-	93	41.449	Canis_familiaris
ENSPMGG00000003548	zc3hc1	95	41.734	ENSCAFG00000031850	-	94	41.331	Canis_familiaris
ENSPMGG00000003548	zc3hc1	95	41.331	ENSCAFG00000029401	-	93	40.927	Canis_familiaris
ENSPMGG00000003548	zc3hc1	95	41.532	ENSCAFG00020006829	-	94	41.129	Canis_lupus_dingo
ENSPMGG00000003548	zc3hc1	94	42.381	ENSCAFG00020023333	-	94	41.667	Canis_lupus_dingo
ENSPMGG00000003548	zc3hc1	95	34.615	ENSCHIG00000014103	ZC3HC1	94	36.798	Capra_hircus
ENSPMGG00000003548	zc3hc1	94	41.509	ENSTSYG00000002843	ZC3HC1	94	41.274	Carlito_syrichta
ENSPMGG00000003548	zc3hc1	89	38.172	ENSCAPG00000016300	ZC3HC1	94	35.514	Cavia_aperea
ENSPMGG00000003548	zc3hc1	96	45.498	ENSCPOG00000014034	ZC3HC1	97	42.245	Cavia_porcellus
ENSPMGG00000003548	zc3hc1	90	30.000	ENSCCAG00000020384	ZC3HC1	90	34.821	Cebus_capucinus
ENSPMGG00000003548	zc3hc1	94	41.866	ENSCATG00000023130	ZC3HC1	98	38.636	Cercocebus_atys
ENSPMGG00000003548	zc3hc1	96	30.467	ENSCLAG00000008260	ZC3HC1	94	31.311	Chinchilla_lanigera
ENSPMGG00000003548	zc3hc1	73	36.842	ENSCSAG00000009881	ZC3HC1	95	36.842	Chlorocebus_sabaeus
ENSPMGG00000003548	zc3hc1	90	40.465	ENSCHOG00000011846	ZC3HC1	96	42.129	Choloepus_hoffmanni
ENSPMGG00000003548	zc3hc1	97	39.796	ENSCPBG00000017519	ZC3HC1	91	43.789	Chrysemys_picta_bellii
ENSPMGG00000003548	zc3hc1	94	41.627	ENSCANG00000029091	ZC3HC1	94	41.627	Colobus_angolensis_palliatus
ENSPMGG00000003548	zc3hc1	94	42.823	ENSCGRG00001018805	Zc3hc1	94	41.866	Cricetulus_griseus_chok1gshd
ENSPMGG00000003548	zc3hc1	90	41.151	ENSCGRG00000017114	Zc3hc1	90	40.512	Cricetulus_griseus_crigri
ENSPMGG00000003548	zc3hc1	99	63.783	ENSCSEG00000009284	zc3hc1	97	63.380	Cynoglossus_semilaevis
ENSPMGG00000003548	zc3hc1	99	65.294	ENSCVAG00000011566	zc3hc1	95	64.167	Cyprinodon_variegatus
ENSPMGG00000003548	zc3hc1	99	54.635	ENSDARG00000062651	zc3hc1	100	54.241	Danio_rerio
ENSPMGG00000003548	zc3hc1	94	41.020	ENSDNOG00000045016	ZC3HC1	93	40.408	Dasypus_novemcinctus
ENSPMGG00000003548	zc3hc1	96	42.680	ENSDORG00000008697	Zc3hc1	94	41.935	Dipodomys_ordii
ENSPMGG00000003548	zc3hc1	90	40.930	ENSEASG00005008789	ZC3HC1	94	41.866	Equus_asinus_asinus
ENSPMGG00000003548	zc3hc1	95	39.839	ENSECAG00000017886	ZC3HC1	94	40.040	Equus_caballus
ENSPMGG00000003548	zc3hc1	79	39.149	ENSEEUG00000003123	ZC3HC1	76	38.298	Erinaceus_europaeus
ENSPMGG00000003548	zc3hc1	100	58.529	ENSELUG00000023168	zc3hc1	99	54.369	Esox_lucius
ENSPMGG00000003548	zc3hc1	94	42.105	ENSFCAG00000010429	ZC3HC1	94	42.105	Felis_catus
ENSPMGG00000003548	zc3hc1	89	39.211	ENSFALG00000005006	ZC3HC1	91	39.770	Ficedula_albicollis
ENSPMGG00000003548	zc3hc1	96	41.844	ENSFDAG00000019897	ZC3HC1	95	42.080	Fukomys_damarensis
ENSPMGG00000003548	zc3hc1	92	64.655	ENSFHEG00000020149	zc3hc1	96	63.598	Fundulus_heteroclitus
ENSPMGG00000003548	zc3hc1	98	57.980	ENSGMOG00000002914	zc3hc1	100	57.980	Gadus_morhua
ENSPMGG00000003548	zc3hc1	98	39.216	ENSGALG00000008003	ZC3HC1	98	42.515	Gallus_gallus
ENSPMGG00000003548	zc3hc1	95	65.696	ENSGAFG00000016095	zc3hc1	96	65.281	Gambusia_affinis
ENSPMGG00000003548	zc3hc1	95	64.463	ENSGACG00000019706	zc3hc1	96	64.315	Gasterosteus_aculeatus
ENSPMGG00000003548	zc3hc1	80	38.168	ENSGAGG00000016106	ZC3HC1	97	46.484	Gopherus_agassizii
ENSPMGG00000003548	zc3hc1	94	42.105	ENSGGOG00000015504	ZC3HC1	94	41.866	Gorilla_gorilla
ENSPMGG00000003548	zc3hc1	95	68.476	ENSHBUG00000008347	zc3hc1	95	68.476	Haplochromis_burtoni
ENSPMGG00000003548	zc3hc1	99	42.141	ENSHGLG00000005085	ZC3HC1	100	42.147	Heterocephalus_glaber_female
ENSPMGG00000003548	zc3hc1	99	42.237	ENSHGLG00100011395	ZC3HC1	100	42.147	Heterocephalus_glaber_male
ENSPMGG00000003548	zc3hc1	99	60.324	ENSHCOG00000014309	zc3hc1	100	61.943	Hippocampus_comes
ENSPMGG00000003548	zc3hc1	99	39.062	ENSSTOG00000023599	-	93	44.656	Ictidomys_tridecemlineatus
ENSPMGG00000003548	zc3hc1	93	67.585	ENSKMAG00000015315	zc3hc1	87	66.949	Kryptolebias_marmoratus
ENSPMGG00000003548	zc3hc1	98	63.366	ENSLBEG00000017325	zc3hc1	99	62.970	Labrus_bergylta
ENSPMGG00000003548	zc3hc1	78	42.054	ENSLACG00000013032	ZC3HC1	93	41.809	Latimeria_chalumnae
ENSPMGG00000003548	zc3hc1	99	52.212	ENSLOCG00000015963	zc3hc1	96	48.503	Lepisosteus_oculatus
ENSPMGG00000003548	zc3hc1	95	41.566	ENSLAFG00000001292	ZC3HC1	94	41.566	Loxodonta_africana
ENSPMGG00000003548	zc3hc1	94	41.866	ENSMFAG00000030176	ZC3HC1	98	38.843	Macaca_fascicularis
ENSPMGG00000003548	zc3hc1	94	41.866	ENSMMUG00000006155	ZC3HC1	98	38.843	Macaca_mulatta
ENSPMGG00000003548	zc3hc1	94	41.866	ENSMNEG00000011833	ZC3HC1	98	38.843	Macaca_nemestrina
ENSPMGG00000003548	zc3hc1	94	41.866	ENSMLEG00000027328	ZC3HC1	98	38.636	Mandrillus_leucophaeus
ENSPMGG00000003548	zc3hc1	99	65.675	ENSMAMG00000010691	zc3hc1	99	65.010	Mastacembelus_armatus
ENSPMGG00000003548	zc3hc1	95	68.267	ENSMZEG00005007142	zc3hc1	95	68.267	Maylandia_zebra
ENSPMGG00000003548	zc3hc1	91	38.843	ENSMGAG00000002977	ZC3HC1	92	39.749	Meleagris_gallopavo
ENSPMGG00000003548	zc3hc1	84	34.644	ENSMAUG00000017032	Zc3hc1	85	39.547	Mesocricetus_auratus
ENSPMGG00000003548	zc3hc1	94	42.344	ENSMICG00000009167	ZC3HC1	94	42.080	Microcebus_murinus
ENSPMGG00000003548	zc3hc1	94	43.405	ENSMOCG00000015239	Zc3hc1	94	42.686	Microtus_ochrogaster
ENSPMGG00000003548	zc3hc1	91	62.238	ENSMMOG00000002204	zc3hc1	99	62.238	Mola_mola
ENSPMGG00000003548	zc3hc1	94	31.398	ENSMODG00000014630	ZC3HC1	88	33.194	Monodelphis_domestica
ENSPMGG00000003548	zc3hc1	95	68.125	ENSMALG00000014447	zc3hc1	98	67.335	Monopterus_albus
ENSPMGG00000003548	zc3hc1	96	42.925	MGP_CAROLIEiJ_G0028183	Zc3hc1	90	50.207	Mus_caroli
ENSPMGG00000003548	zc3hc1	96	42.523	ENSMUSG00000039130	Zc3hc1	90	50.202	Mus_musculus
ENSPMGG00000003548	zc3hc1	95	38.955	MGP_PahariEiJ_G0021941	Zc3hc1	89	43.802	Mus_pahari
ENSPMGG00000003548	zc3hc1	96	42.523	MGP_SPRETEiJ_G0029183	Zc3hc1	90	50.202	Mus_spretus
ENSPMGG00000003548	zc3hc1	92	41.494	ENSMPUG00000005297	ZC3HC1	91	41.494	Mustela_putorius_furo
ENSPMGG00000003548	zc3hc1	65	36.152	ENSMLUG00000029228	-	95	35.860	Myotis_lucifugus
ENSPMGG00000003548	zc3hc1	93	40.041	ENSMLUG00000000063	-	93	39.634	Myotis_lucifugus
ENSPMGG00000003548	zc3hc1	94	42.686	ENSNGAG00000019014	Zc3hc1	94	41.966	Nannospalax_galili
ENSPMGG00000003548	zc3hc1	95	67.850	ENSNBRG00000004577	zc3hc1	95	67.850	Neolamprologus_brichardi
ENSPMGG00000003548	zc3hc1	95	39.919	ENSNLEG00000012698	ZC3HC1	93	41.546	Nomascus_leucogenys
ENSPMGG00000003548	zc3hc1	94	37.161	ENSMEUG00000011023	ZC3HC1	91	42.486	Notamacropus_eugenii
ENSPMGG00000003548	zc3hc1	96	42.389	ENSODEG00000014604	ZC3HC1	95	42.155	Octodon_degus
ENSPMGG00000003548	zc3hc1	95	68.476	ENSONIG00000011644	zc3hc1	95	68.476	Oreochromis_niloticus
ENSPMGG00000003548	zc3hc1	95	42.857	ENSOANG00000011460	ZC3HC1	86	42.756	Ornithorhynchus_anatinus
ENSPMGG00000003548	zc3hc1	90	42.004	ENSOCUG00000017137	ZC3HC1	95	37.190	Oryctolagus_cuniculus
ENSPMGG00000003548	zc3hc1	99	67.751	ENSORLG00000014409	zc3hc1	94	64.916	Oryzias_latipes
ENSPMGG00000003548	zc3hc1	99	68.047	ENSORLG00020015874	zc3hc1	94	65.336	Oryzias_latipes_hni
ENSPMGG00000003548	zc3hc1	94	65.756	ENSORLG00015014641	zc3hc1	94	65.336	Oryzias_latipes_hsok
ENSPMGG00000003548	zc3hc1	98	63.306	ENSOMEG00000020604	zc3hc1	98	63.052	Oryzias_melastigma
ENSPMGG00000003548	zc3hc1	98	63.508	ENSOMEG00000000215	zc3hc1	98	63.253	Oryzias_melastigma
ENSPMGG00000003548	zc3hc1	99	35.328	ENSOGAG00000026193	ZC3HC1	99	35.521	Otolemur_garnettii
ENSPMGG00000003548	zc3hc1	95	40.241	ENSOARG00000004907	ZC3HC1	92	40.452	Ovis_aries
ENSPMGG00000003548	zc3hc1	94	41.866	ENSPPAG00000043172	ZC3HC1	94	41.627	Pan_paniscus
ENSPMGG00000003548	zc3hc1	94	41.866	ENSPPRG00000001004	ZC3HC1	94	41.866	Panthera_pardus
ENSPMGG00000003548	zc3hc1	94	42.105	ENSPTIG00000007823	ZC3HC1	94	42.105	Panthera_tigris_altaica
ENSPMGG00000003548	zc3hc1	99	39.155	ENSPTRG00000019685	ZC3HC1	99	39.155	Pan_troglodytes
ENSPMGG00000003548	zc3hc1	94	41.866	ENSPANG00000014229	ZC3HC1	98	38.636	Papio_anubis
ENSPMGG00000003548	zc3hc1	99	49.804	ENSPKIG00000007172	zc3hc1	97	53.372	Paramormyrops_kingsleyae
ENSPMGG00000003548	zc3hc1	91	51.866	ENSPSIG00000016646	ZC3HC1	93	41.736	Pelodiscus_sinensis
ENSPMGG00000003548	zc3hc1	94	40.865	ENSPEMG00000000514	Zc3hc1	94	41.247	Peromyscus_maniculatus_bairdii
ENSPMGG00000003548	zc3hc1	94	40.751	ENSPCIG00000020619	ZC3HC1	95	42.745	Phascolarctos_cinereus
ENSPMGG00000003548	zc3hc1	95	65.145	ENSPFOG00000003466	zc3hc1	96	64.865	Poecilia_formosa
ENSPMGG00000003548	zc3hc1	95	65.353	ENSPLAG00000022211	zc3hc1	96	65.073	Poecilia_latipinna
ENSPMGG00000003548	zc3hc1	95	65.353	ENSPMEG00000001458	zc3hc1	96	65.073	Poecilia_mexicana
ENSPMGG00000003548	zc3hc1	95	64.938	ENSPREG00000004004	zc3hc1	96	64.657	Poecilia_reticulata
ENSPMGG00000003548	zc3hc1	95	37.575	ENSPPYG00000017998	ZC3HC1	94	37.698	Pongo_abelii
ENSPMGG00000003548	zc3hc1	90	39.675	ENSPCAG00000001182	ZC3HC1	93	42.035	Procavia_capensis
ENSPMGG00000003548	zc3hc1	94	42.823	ENSPCOG00000017354	ZC3HC1	94	41.866	Propithecus_coquereli
ENSPMGG00000003548	zc3hc1	96	38.540	ENSPVAG00000003195	ZC3HC1	95	38.384	Pteropus_vampyrus
ENSPMGG00000003548	zc3hc1	95	68.267	ENSPNYG00000020692	zc3hc1	95	68.267	Pundamilia_nyererei
ENSPMGG00000003548	zc3hc1	97	46.076	ENSPNAG00000020746	zc3hc1	99	46.856	Pygocentrus_nattereri
ENSPMGG00000003548	zc3hc1	95	39.192	ENSRNOG00000010154	Zc3hc1	90	39.615	Rattus_norvegicus
ENSPMGG00000003548	zc3hc1	89	44.595	ENSRBIG00000029409	ZC3HC1	98	40.340	Rhinopithecus_bieti
ENSPMGG00000003548	zc3hc1	94	41.627	ENSRROG00000041831	ZC3HC1	98	39.468	Rhinopithecus_roxellana
ENSPMGG00000003548	zc3hc1	94	33.881	ENSSBOG00000032787	ZC3HC1	93	49.138	Saimiri_boliviensis_boliviensis
ENSPMGG00000003548	zc3hc1	95	37.773	ENSSHAG00000002529	ZC3HC1	94	40.969	Sarcophilus_harrisii
ENSPMGG00000003548	zc3hc1	92	51.363	ENSSFOG00015003667	zc3hc1	88	50.524	Scleropages_formosus
ENSPMGG00000003548	zc3hc1	95	66.667	ENSSMAG00000000647	zc3hc1	86	67.292	Scophthalmus_maximus
ENSPMGG00000003548	zc3hc1	96	68.323	ENSSDUG00000004241	zc3hc1	94	68.116	Seriola_dumerili
ENSPMGG00000003548	zc3hc1	95	68.607	ENSSLDG00000025056	zc3hc1	93	68.399	Seriola_lalandi_dorsalis
ENSPMGG00000003548	zc3hc1	96	34.576	ENSSARG00000012013	ZC3HC1	90	38.723	Sorex_araneus
ENSPMGG00000003548	zc3hc1	90	40.051	ENSSPUG00000000778	ZC3HC1	82	55.610	Sphenodon_punctatus
ENSPMGG00000003548	zc3hc1	99	67.331	ENSSPAG00000020041	zc3hc1	100	67.331	Stegastes_partitus
ENSPMGG00000003548	zc3hc1	95	41.943	ENSSSCG00000016565	ZC3HC1	95	42.654	Sus_scrofa
ENSPMGG00000003548	zc3hc1	95	59.751	ENSTRUG00000020077	zc3hc1	96	59.459	Takifugu_rubripes
ENSPMGG00000003548	zc3hc1	95	61.042	ENSTNIG00000007585	zc3hc1	95	62.418	Tetraodon_nigroviridis
ENSPMGG00000003548	zc3hc1	72	34.262	ENSTBEG00000005216	ZC3HC1	66	38.439	Tupaia_belangeri
ENSPMGG00000003548	zc3hc1	92	41.701	ENSTTRG00000008458	ZC3HC1	97	41.909	Tursiops_truncatus
ENSPMGG00000003548	zc3hc1	95	41.532	ENSUAMG00000020249	ZC3HC1	94	41.532	Ursus_americanus
ENSPMGG00000003548	zc3hc1	95	41.818	ENSUMAG00000009268	ZC3HC1	94	41.818	Ursus_maritimus
ENSPMGG00000003548	zc3hc1	73	39.024	ENSVPAG00000010846	ZC3HC1	57	41.781	Vicugna_pacos
ENSPMGG00000003548	zc3hc1	92	42.204	ENSVVUG00000012386	ZC3HC1	95	41.788	Vulpes_vulpes
ENSPMGG00000003548	zc3hc1	93	39.175	ENSXETG00000033900	zc3hc1	98	38.017	Xenopus_tropicalis
ENSPMGG00000003548	zc3hc1	93	65.526	ENSXCOG00000013570	zc3hc1	95	64.987	Xiphophorus_couchianus
ENSPMGG00000003548	zc3hc1	94	57.303	ENSXMAG00000010979	zc3hc1	93	64.760	Xiphophorus_maculatus