EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMGG00000003629 (Gene tree)
Gene ID: -
Gene Symbol: snd1
Alias: -
Full Name: staphylococcal nuclease and tudor domain containing 1
Gene Type: protein_coding
Species: Periophthalmus_magnuspinnatus
Status: putative
Strand: Minus strand
Length: 96870 bases
Position: chrKN460357.1:1560511-1657380
Accession: ZDB-GENE-030131-3124
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMGP00000004255	TUDOR	PF00567.24	1.1e-26	1	1
ENSPMGP00000004255	SNase	PF00565.17	2.3e-62	1	4
ENSPMGP00000004255	SNase	PF00565.17	2.3e-62	2	4
ENSPMGP00000004255	SNase	PF00565.17	2.3e-62	3	4
ENSPMGP00000004255	SNase	PF00565.17	2.3e-62	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMGT00000004522	-	2508	-	ENSPMGP00000004255	835 (aa)	-	-

Gene Model

Click here to download ENSPMGG00000003629's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMGG00000003629's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMGG00000003629	snd1	100	82.994	ENSG00000197157	SND1	92	82.994	Homo_sapiens
ENSPMGG00000003629	snd1	100	94.617	ENSAPOG00000017599	snd1	92	94.498	Acanthochromis_polyacanthus
ENSPMGG00000003629	snd1	100	82.796	ENSAMEG00000004664	SND1	87	82.796	Ailuropoda_melanoleuca
ENSPMGG00000003629	snd1	100	90.670	ENSACIG00000003551	snd1	92	90.670	Amphilophus_citrinellus
ENSPMGG00000003629	snd1	100	94.378	ENSAOCG00000014166	snd1	92	94.378	Amphiprion_ocellaris
ENSPMGG00000003629	snd1	100	94.498	ENSAPEG00000007067	snd1	92	94.498	Amphiprion_percula
ENSPMGG00000003629	snd1	100	94.617	ENSATEG00000018475	snd1	84	94.617	Anabas_testudineus
ENSPMGG00000003629	snd1	100	82.994	ENSANAG00000034463	SND1	93	82.994	Aotus_nancymaae
ENSPMGG00000003629	snd1	100	93.541	ENSACLG00000022897	snd1	92	93.541	Astatotilapia_calliptera
ENSPMGG00000003629	snd1	100	89.976	ENSAMXG00000016318	snd1	93	89.857	Astyanax_mexicanus
ENSPMGG00000003629	snd1	100	83.114	ENSBTAG00000010692	SND1	92	83.114	Bos_taurus
ENSPMGG00000003629	snd1	100	46.970	WBGene00006626	tsn-1	92	47.203	Caenorhabditis_elegans
ENSPMGG00000003629	snd1	100	82.874	ENSCJAG00000017668	SND1	93	82.874	Callithrix_jacchus
ENSPMGG00000003629	snd1	100	83.114	ENSCAFG00000001700	SND1	92	83.114	Canis_familiaris
ENSPMGG00000003629	snd1	100	83.114	ENSCAFG00020021639	SND1	92	83.114	Canis_lupus_dingo
ENSPMGG00000003629	snd1	100	83.234	ENSCHIG00000023390	SND1	93	83.234	Capra_hircus
ENSPMGG00000003629	snd1	74	86.076	ENSTSYG00000004979	SND1	93	86.076	Carlito_syrichta
ENSPMGG00000003629	snd1	100	72.401	ENSCAPG00000010677	SND1	91	72.401	Cavia_aperea
ENSPMGG00000003629	snd1	100	82.515	ENSCPOG00000006251	SND1	92	82.515	Cavia_porcellus
ENSPMGG00000003629	snd1	100	82.994	ENSCCAG00000036847	SND1	92	82.994	Cebus_capucinus
ENSPMGG00000003629	snd1	100	83.234	ENSCATG00000035214	SND1	94	83.234	Cercocebus_atys
ENSPMGG00000003629	snd1	100	83.114	ENSCLAG00000011796	SND1	91	86.076	Chinchilla_lanigera
ENSPMGG00000003629	snd1	100	83.234	ENSCSAG00000010182	SND1	92	83.234	Chlorocebus_sabaeus
ENSPMGG00000003629	snd1	83	75.490	ENSCHOG00000002218	SND1	84	75.490	Choloepus_hoffmanni
ENSPMGG00000003629	snd1	100	83.353	ENSCPBG00000018094	SND1	92	83.353	Chrysemys_picta_bellii
ENSPMGG00000003629	snd1	100	56.080	ENSCING00000000524	-	92	56.080	Ciona_intestinalis
ENSPMGG00000003629	snd1	100	57.381	ENSCSAVG00000008807	-	91	57.381	Ciona_savignyi
ENSPMGG00000003629	snd1	100	83.234	ENSCANG00000035119	SND1	92	83.234	Colobus_angolensis_palliatus
ENSPMGG00000003629	snd1	100	82.635	ENSCGRG00001022514	Snd1	94	82.854	Cricetulus_griseus_chok1gshd
ENSPMGG00000003629	snd1	100	82.635	ENSCGRG00000012277	Snd1	94	82.635	Cricetulus_griseus_crigri
ENSPMGG00000003629	snd1	100	92.105	ENSCSEG00000008661	snd1	94	92.206	Cynoglossus_semilaevis
ENSPMGG00000003629	snd1	100	93.541	ENSCVAG00000010316	snd1	96	93.541	Cyprinodon_variegatus
ENSPMGG00000003629	snd1	100	89.725	ENSDARG00000006766	snd1	91	91.619	Danio_rerio
ENSPMGG00000003629	snd1	100	80.884	ENSDNOG00000006795	SND1	94	80.884	Dasypus_novemcinctus
ENSPMGG00000003629	snd1	100	82.874	ENSDORG00000000336	Snd1	92	82.874	Dipodomys_ordii
ENSPMGG00000003629	snd1	99	51.103	FBgn0035121	Tudor-SN	92	51.220	Drosophila_melanogaster
ENSPMGG00000003629	snd1	92	66.144	ENSETEG00000000375	SND1	86	66.144	Echinops_telfairi
ENSPMGG00000003629	snd1	66	66.846	ENSEBUG00000014201	-	84	77.174	Eptatretus_burgeri
ENSPMGG00000003629	snd1	100	82.994	ENSEASG00005008513	SND1	92	81.647	Equus_asinus_asinus
ENSPMGG00000003629	snd1	100	82.874	ENSECAG00000011451	SND1	92	82.874	Equus_caballus
ENSPMGG00000003629	snd1	99	75.630	ENSEEUG00000014737	SND1	91	75.630	Erinaceus_europaeus
ENSPMGG00000003629	snd1	100	88.544	ENSELUG00000001805	snd1	89	88.544	Esox_lucius
ENSPMGG00000003629	snd1	100	82.994	ENSFCAG00000008289	SND1	92	82.994	Felis_catus
ENSPMGG00000003629	snd1	100	82.754	ENSFDAG00000015881	SND1	92	82.754	Fukomys_damarensis
ENSPMGG00000003629	snd1	99	94.005	ENSFHEG00000004093	snd1	94	94.005	Fundulus_heteroclitus
ENSPMGG00000003629	snd1	72	81.875	ENSGMOG00000018932	snd1	57	81.875	Gadus_morhua
ENSPMGG00000003629	snd1	100	94.498	ENSGAFG00000008421	snd1	94	94.498	Gambusia_affinis
ENSPMGG00000003629	snd1	100	57.210	ENSGACG00000019793	snd1	92	57.210	Gasterosteus_aculeatus
ENSPMGG00000003629	snd1	100	83.114	ENSGGOG00000009614	SND1	93	83.114	Gorilla_gorilla
ENSPMGG00000003629	snd1	100	93.660	ENSHBUG00000019135	snd1	92	93.660	Haplochromis_burtoni
ENSPMGG00000003629	snd1	100	82.395	ENSHGLG00000003618	SND1	91	85.353	Heterocephalus_glaber_female
ENSPMGG00000003629	snd1	100	82.395	ENSHGLG00100012449	SND1	92	82.395	Heterocephalus_glaber_male
ENSPMGG00000003629	snd1	99	91.737	ENSHCOG00000005266	snd1	92	91.737	Hippocampus_comes
ENSPMGG00000003629	snd1	100	88.663	ENSIPUG00000013279	snd1	92	88.663	Ictalurus_punctatus
ENSPMGG00000003629	snd1	100	82.994	ENSSTOG00000002140	SND1	92	82.994	Ictidomys_tridecemlineatus
ENSPMGG00000003629	snd1	100	82.994	ENSJJAG00000009561	Snd1	92	82.994	Jaculus_jaculus
ENSPMGG00000003629	snd1	100	93.660	ENSKMAG00000016997	snd1	92	93.660	Kryptolebias_marmoratus
ENSPMGG00000003629	snd1	100	94.224	ENSLBEG00000013563	snd1	93	91.986	Labrus_bergylta
ENSPMGG00000003629	snd1	100	88.033	ENSLOCG00000015537	snd1	92	88.033	Lepisosteus_oculatus
ENSPMGG00000003629	snd1	100	83.353	ENSLAFG00000009696	SND1	92	83.353	Loxodonta_africana
ENSPMGG00000003629	snd1	100	83.234	ENSMFAG00000038114	SND1	94	83.234	Macaca_fascicularis
ENSPMGG00000003629	snd1	100	83.234	ENSMMUG00000015432	SND1	90	86.182	Macaca_mulatta
ENSPMGG00000003629	snd1	100	83.234	ENSMNEG00000039808	SND1	94	86.182	Macaca_nemestrina
ENSPMGG00000003629	snd1	100	83.114	ENSMLEG00000029040	SND1	94	86.182	Mandrillus_leucophaeus
ENSPMGG00000003629	snd1	100	94.491	ENSMAMG00000011739	snd1	92	94.491	Mastacembelus_armatus
ENSPMGG00000003629	snd1	100	93.541	ENSMZEG00005005681	snd1	93	93.421	Maylandia_zebra
ENSPMGG00000003629	snd1	100	82.754	ENSMICG00000000097	SND1	92	82.754	Microcebus_murinus
ENSPMGG00000003629	snd1	100	82.994	ENSMOCG00000005040	Snd1	92	82.994	Microtus_ochrogaster
ENSPMGG00000003629	snd1	100	93.660	ENSMMOG00000001795	snd1	92	93.660	Mola_mola
ENSPMGG00000003629	snd1	100	82.156	ENSMODG00000015182	SND1	92	82.156	Monodelphis_domestica
ENSPMGG00000003629	snd1	100	94.019	ENSMALG00000012071	snd1	93	94.019	Monopterus_albus
ENSPMGG00000003629	snd1	100	82.515	MGP_CAROLIEiJ_G0028159	Snd1	92	85.145	Mus_caroli
ENSPMGG00000003629	snd1	100	82.275	ENSMUSG00000001424	Snd1	93	83.363	Mus_musculus
ENSPMGG00000003629	snd1	100	82.515	MGP_PahariEiJ_G0021917	Snd1	93	85.145	Mus_pahari
ENSPMGG00000003629	snd1	100	82.515	MGP_SPRETEiJ_G0029159	Snd1	93	83.717	Mus_spretus
ENSPMGG00000003629	snd1	100	82.874	ENSMPUG00000006545	SND1	92	82.874	Mustela_putorius_furo
ENSPMGG00000003629	snd1	100	81.797	ENSMLUG00000017130	SND1	94	81.797	Myotis_lucifugus
ENSPMGG00000003629	snd1	100	82.635	ENSNGAG00000011186	Snd1	92	82.635	Nannospalax_galili
ENSPMGG00000003629	snd1	100	93.780	ENSNBRG00000006681	snd1	92	93.780	Neolamprologus_brichardi
ENSPMGG00000003629	snd1	100	83.114	ENSNLEG00000012263	SND1	92	86.232	Nomascus_leucogenys
ENSPMGG00000003629	snd1	92	75.817	ENSOPRG00000013405	SND1	84	75.817	Ochotona_princeps
ENSPMGG00000003629	snd1	100	82.994	ENSODEG00000011502	SND1	92	82.994	Octodon_degus
ENSPMGG00000003629	snd1	100	93.900	ENSONIG00000011481	snd1	89	93.900	Oreochromis_niloticus
ENSPMGG00000003629	snd1	100	82.395	ENSOANG00000000817	SND1	92	82.395	Ornithorhynchus_anatinus
ENSPMGG00000003629	snd1	100	82.754	ENSOCUG00000001620	SND1	92	82.754	Oryctolagus_cuniculus
ENSPMGG00000003629	snd1	100	92.464	ENSORLG00000015201	snd1	93	92.464	Oryzias_latipes
ENSPMGG00000003629	snd1	100	92.703	ENSORLG00020013991	snd1	93	92.703	Oryzias_latipes_hni
ENSPMGG00000003629	snd1	100	92.703	ENSORLG00015012436	snd1	92	92.703	Oryzias_latipes_hsok
ENSPMGG00000003629	snd1	100	92.584	ENSOMEG00000006406	snd1	92	92.584	Oryzias_melastigma
ENSPMGG00000003629	snd1	100	82.676	ENSOGAG00000013356	SND1	86	82.676	Otolemur_garnettii
ENSPMGG00000003629	snd1	100	80.719	ENSOARG00000002149	SND1	94	80.719	Ovis_aries
ENSPMGG00000003629	snd1	100	82.994	ENSPPAG00000042947	SND1	93	82.994	Pan_paniscus
ENSPMGG00000003629	snd1	100	82.994	ENSPPRG00000004494	SND1	92	82.994	Panthera_pardus
ENSPMGG00000003629	snd1	100	82.874	ENSPTIG00000014214	SND1	92	82.874	Panthera_tigris_altaica
ENSPMGG00000003629	snd1	100	82.994	ENSPTRG00000023911	SND1	93	82.994	Pan_troglodytes
ENSPMGG00000003629	snd1	100	83.234	ENSPANG00000011997	SND1	94	83.234	Papio_anubis
ENSPMGG00000003629	snd1	100	85.884	ENSPKIG00000023494	snd1	92	85.884	Paramormyrops_kingsleyae
ENSPMGG00000003629	snd1	100	82.874	ENSPEMG00000010240	Snd1	92	82.874	Peromyscus_maniculatus_bairdii
ENSPMGG00000003629	snd1	100	74.493	ENSPMAG00000007915	-	94	74.493	Petromyzon_marinus
ENSPMGG00000003629	snd1	100	82.754	ENSPCIG00000011561	SND1	92	82.754	Phascolarctos_cinereus
ENSPMGG00000003629	snd1	100	93.780	ENSPFOG00000001557	snd1	92	93.780	Poecilia_formosa
ENSPMGG00000003629	snd1	100	93.780	ENSPLAG00000018459	snd1	89	93.780	Poecilia_latipinna
ENSPMGG00000003629	snd1	100	94.019	ENSPMEG00000006803	snd1	92	94.019	Poecilia_mexicana
ENSPMGG00000003629	snd1	100	93.660	ENSPREG00000002189	snd1	92	93.765	Poecilia_reticulata
ENSPMGG00000003629	snd1	92	84.314	ENSPPYG00000017972	SND1	91	84.314	Pongo_abelii
ENSPMGG00000003629	snd1	100	72.695	ENSPCAG00000011305	SND1	92	72.695	Procavia_capensis
ENSPMGG00000003629	snd1	100	82.874	ENSPCOG00000026791	SND1	94	82.874	Propithecus_coquereli
ENSPMGG00000003629	snd1	100	80.719	ENSPVAG00000013945	SND1	92	80.719	Pteropus_vampyrus
ENSPMGG00000003629	snd1	100	93.421	ENSPNYG00000000932	snd1	92	93.421	Pundamilia_nyererei
ENSPMGG00000003629	snd1	100	89.857	ENSPNAG00000001206	snd1	92	89.857	Pygocentrus_nattereri
ENSPMGG00000003629	snd1	100	82.395	ENSRNOG00000031173	Snd1	94	81.557	Rattus_norvegicus
ENSPMGG00000003629	snd1	74	86.628	ENSRBIG00000027782	-	91	86.628	Rhinopithecus_bieti
ENSPMGG00000003629	snd1	100	83.234	ENSRROG00000033020	SND1	92	83.234	Rhinopithecus_roxellana
ENSPMGG00000003629	snd1	100	82.994	ENSSBOG00000032461	SND1	93	84.266	Saimiri_boliviensis_boliviensis
ENSPMGG00000003629	snd1	100	79.641	ENSSHAG00000015359	SND1	94	79.641	Sarcophilus_harrisii
ENSPMGG00000003629	snd1	100	87.915	ENSSFOG00015001103	snd1	92	87.915	Scleropages_formosus
ENSPMGG00000003629	snd1	100	92.943	ENSSMAG00000001932	snd1	87	92.943	Scophthalmus_maximus
ENSPMGG00000003629	snd1	100	94.258	ENSSDUG00000002699	snd1	86	94.258	Seriola_dumerili
ENSPMGG00000003629	snd1	100	86.483	ENSSLDG00000001950	snd1	91	86.483	Seriola_lalandi_dorsalis
ENSPMGG00000003629	snd1	92	79.003	ENSSARG00000004877	SND1	90	79.003	Sorex_araneus
ENSPMGG00000003629	snd1	74	78.750	ENSSPUG00000017586	SND1	93	78.750	Sphenodon_punctatus
ENSPMGG00000003629	snd1	74	93.636	ENSSPAG00000021398	snd1	92	93.636	Stegastes_partitus
ENSPMGG00000003629	snd1	100	82.994	ENSSSCG00000016590	SND1	92	82.994	Sus_scrofa
ENSPMGG00000003629	snd1	100	91.148	ENSTRUG00000014067	snd1	92	91.148	Takifugu_rubripes
ENSPMGG00000003629	snd1	100	91.388	ENSTNIG00000011019	snd1	91	92.793	Tetraodon_nigroviridis
ENSPMGG00000003629	snd1	99	77.311	ENSTBEG00000003999	SND1	98	77.311	Tupaia_belangeri
ENSPMGG00000003629	snd1	100	78.323	ENSTTRG00000006059	SND1	92	78.323	Tursiops_truncatus
ENSPMGG00000003629	snd1	91	82.520	ENSUAMG00000005604	-	87	82.520	Ursus_americanus
ENSPMGG00000003629	snd1	70	75.588	ENSUAMG00000002820	-	79	75.588	Ursus_americanus
ENSPMGG00000003629	snd1	100	82.994	ENSUMAG00000005960	SND1	92	82.994	Ursus_maritimus
ENSPMGG00000003629	snd1	78	80.328	ENSVPAG00000008302	SND1	68	80.328	Vicugna_pacos
ENSPMGG00000003629	snd1	100	82.994	ENSVVUG00000007226	SND1	92	82.994	Vulpes_vulpes
ENSPMGG00000003629	snd1	100	81.004	ENSXETG00000023043	snd1	95	81.004	Xenopus_tropicalis
ENSPMGG00000003629	snd1	99	92.096	ENSXCOG00000013629	snd1	98	92.096	Xiphophorus_couchianus
ENSPMGG00000003629	snd1	100	94.378	ENSXMAG00000011469	snd1	92	94.378	Xiphophorus_maculatus