EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMGG00000004066 (Gene tree)
Gene ID: -
Gene Symbol: utp20
Alias: -
Full Name: UTP20 small subunit (SSU) processome component
Gene Type: protein_coding
Species: Periophthalmus_magnuspinnatus
Status: putative
Strand: Plus strand
Length: 27043 bases
Position: chrKN466258.1:12782-39824
Accession: ZDB-GENE-080225-38
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMGP00000004805	DRIM	PF07539.12	5.4e-161	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMGT00000005099	-	8172	-	ENSPMGP00000004805	2723 (aa)	-	-

Gene Model

Click here to download ENSPMGG00000004066's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMGG00000004066's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMGG00000004066	utp20	99	55.682	ENSG00000120800	UTP20	100	55.508	Homo_sapiens
ENSPMGG00000004066	utp20	100	76.194	ENSAPOG00000002429	utp20	100	76.133	Acanthochromis_polyacanthus
ENSPMGG00000004066	utp20	99	55.418	ENSAMEG00000016416	UTP20	100	55.138	Ailuropoda_melanoleuca
ENSPMGG00000004066	utp20	100	75.045	ENSACIG00000007987	utp20	100	75.045	Amphilophus_citrinellus
ENSPMGG00000004066	utp20	60	75.981	ENSAOCG00000015055	utp20	96	75.981	Amphiprion_ocellaris
ENSPMGG00000004066	utp20	100	76.007	ENSAPEG00000011605	utp20	100	75.900	Amphiprion_percula
ENSPMGG00000004066	utp20	98	75.906	ENSATEG00000005601	utp20	99	75.870	Anabas_testudineus
ENSPMGG00000004066	utp20	99	56.048	ENSAPLG00000015651	UTP20	100	56.223	Anas_platyrhynchos
ENSPMGG00000004066	utp20	99	55.891	ENSACAG00000011671	UTP20	100	55.792	Anolis_carolinensis
ENSPMGG00000004066	utp20	99	54.578	ENSANAG00000027152	UTP20	100	54.261	Aotus_nancymaae
ENSPMGG00000004066	utp20	96	78.495	ENSACLG00000008064	utp20	99	78.495	Astatotilapia_calliptera
ENSPMGG00000004066	utp20	100	64.470	ENSAMXG00000021039	utp20	100	64.357	Astyanax_mexicanus
ENSPMGG00000004066	utp20	99	56.103	ENSBTAG00000003239	UTP20	100	55.817	Bos_taurus
ENSPMGG00000004066	utp20	100	55.417	ENSCJAG00000001913	UTP20	100	55.244	Callithrix_jacchus
ENSPMGG00000004066	utp20	99	55.247	ENSCAFG00000006964	UTP20	100	54.995	Canis_familiaris
ENSPMGG00000004066	utp20	99	55.199	ENSCAFG00020024305	UTP20	100	54.947	Canis_lupus_dingo
ENSPMGG00000004066	utp20	99	55.952	ENSCHIG00000009221	UTP20	100	55.595	Capra_hircus
ENSPMGG00000004066	utp20	99	54.904	ENSTSYG00000003040	UTP20	100	54.820	Carlito_syrichta
ENSPMGG00000004066	utp20	99	52.630	ENSCAPG00000014920	UTP20	100	52.155	Cavia_aperea
ENSPMGG00000004066	utp20	100	53.968	ENSCPOG00000003129	UTP20	100	53.719	Cavia_porcellus
ENSPMGG00000004066	utp20	99	55.694	ENSCCAG00000031422	UTP20	100	55.556	Cebus_capucinus
ENSPMGG00000004066	utp20	99	54.010	ENSCATG00000035636	UTP20	100	53.715	Cercocebus_atys
ENSPMGG00000004066	utp20	100	54.812	ENSCLAG00000011569	UTP20	100	54.839	Chinchilla_lanigera
ENSPMGG00000004066	utp20	99	56.101	ENSCSAG00000003388	UTP20	100	55.821	Chlorocebus_sabaeus
ENSPMGG00000004066	utp20	91	78.788	ENSCHOG00000003532	UTP20	94	78.788	Choloepus_hoffmanni
ENSPMGG00000004066	utp20	95	56.413	ENSCPBG00000004844	UTP20	99	56.115	Chrysemys_picta_bellii
ENSPMGG00000004066	utp20	91	31.412	ENSCSAVG00000008252	-	99	31.195	Ciona_savignyi
ENSPMGG00000004066	utp20	96	55.918	ENSCANG00000034768	UTP20	100	55.156	Colobus_angolensis_palliatus
ENSPMGG00000004066	utp20	99	54.623	ENSCGRG00001017151	Utp20	100	54.066	Cricetulus_griseus_chok1gshd
ENSPMGG00000004066	utp20	99	54.358	ENSCGRG00000008595	Utp20	100	53.803	Cricetulus_griseus_crigri
ENSPMGG00000004066	utp20	98	72.470	ENSCSEG00000014760	utp20	99	72.721	Cynoglossus_semilaevis
ENSPMGG00000004066	utp20	99	72.607	ENSCVAG00000001727	utp20	100	72.607	Cyprinodon_variegatus
ENSPMGG00000004066	utp20	99	64.197	ENSDARG00000099280	utp20	99	64.090	Danio_rerio
ENSPMGG00000004066	utp20	99	55.315	ENSDNOG00000016845	UTP20	100	54.722	Dasypus_novemcinctus
ENSPMGG00000004066	utp20	96	60.609	ENSDORG00000014762	Utp20	98	60.508	Dipodomys_ordii
ENSPMGG00000004066	utp20	88	77.536	ENSETEG00000019983	UTP20	88	77.536	Echinops_telfairi
ENSPMGG00000004066	utp20	99	54.894	ENSEASG00005019981	UTP20	100	55.039	Equus_asinus_asinus
ENSPMGG00000004066	utp20	99	55.035	ENSECAG00000006876	UTP20	99	65.318	Equus_caballus
ENSPMGG00000004066	utp20	72	62.500	ENSEEUG00000003774	UTP20	74	60.294	Erinaceus_europaeus
ENSPMGG00000004066	utp20	100	68.427	ENSELUG00000000798	utp20	100	68.391	Esox_lucius
ENSPMGG00000004066	utp20	99	55.302	ENSFCAG00000006150	UTP20	100	55.096	Felis_catus
ENSPMGG00000004066	utp20	94	54.245	ENSFALG00000011135	UTP20	97	57.189	Ficedula_albicollis
ENSPMGG00000004066	utp20	98	48.689	ENSFDAG00000007567	UTP20	99	48.355	Fukomys_damarensis
ENSPMGG00000004066	utp20	96	73.011	ENSFHEG00000004142	utp20	99	73.011	Fundulus_heteroclitus
ENSPMGG00000004066	utp20	99	64.714	ENSGMOG00000006762	utp20	100	64.490	Gadus_morhua
ENSPMGG00000004066	utp20	99	56.212	ENSGALG00000011643	UTP20	100	56.150	Gallus_gallus
ENSPMGG00000004066	utp20	97	71.661	ENSGAFG00000006986	utp20	99	71.785	Gambusia_affinis
ENSPMGG00000004066	utp20	99	71.932	ENSGACG00000019092	utp20	100	72.038	Gasterosteus_aculeatus
ENSPMGG00000004066	utp20	67	59.763	ENSGAGG00000011169	UTP20	95	59.375	Gopherus_agassizii
ENSPMGG00000004066	utp20	99	54.936	ENSGGOG00000004904	UTP20	100	54.762	Gorilla_gorilla
ENSPMGG00000004066	utp20	100	74.804	ENSHBUG00000010613	utp20	100	74.661	Haplochromis_burtoni
ENSPMGG00000004066	utp20	100	54.191	ENSHGLG00000006422	UTP20	100	54.223	Heterocephalus_glaber_female
ENSPMGG00000004066	utp20	100	52.975	ENSHGLG00100001086	UTP20	100	53.009	Heterocephalus_glaber_male
ENSPMGG00000004066	utp20	96	74.667	ENSHCOG00000005421	utp20	98	74.733	Hippocampus_comes
ENSPMGG00000004066	utp20	100	63.892	ENSIPUG00000013717	utp20	100	63.188	Ictalurus_punctatus
ENSPMGG00000004066	utp20	100	55.784	ENSSTOG00000015995	UTP20	100	55.504	Ictidomys_tridecemlineatus
ENSPMGG00000004066	utp20	99	54.076	ENSJJAG00000019321	Utp20	100	54.008	Jaculus_jaculus
ENSPMGG00000004066	utp20	100	71.183	ENSKMAG00000005972	utp20	100	71.398	Kryptolebias_marmoratus
ENSPMGG00000004066	utp20	98	73.413	ENSLBEG00000000781	utp20	99	73.195	Labrus_bergylta
ENSPMGG00000004066	utp20	79	58.446	ENSLACG00000010098	UTP20	99	58.156	Latimeria_chalumnae
ENSPMGG00000004066	utp20	93	60.376	ENSLOCG00000015197	utp20	94	75.581	Lepisosteus_oculatus
ENSPMGG00000004066	utp20	100	54.259	ENSLAFG00000012983	UTP20	100	54.597	Loxodonta_africana
ENSPMGG00000004066	utp20	99	55.532	ENSMFAG00000037766	UTP20	100	55.571	Macaca_fascicularis
ENSPMGG00000004066	utp20	99	55.567	ENSMMUG00000012891	UTP20	100	55.607	Macaca_mulatta
ENSPMGG00000004066	utp20	99	54.016	ENSMNEG00000037418	UTP20	100	53.770	Macaca_nemestrina
ENSPMGG00000004066	utp20	99	54.251	ENSMLEG00000029148	UTP20	100	54.005	Mandrillus_leucophaeus
ENSPMGG00000004066	utp20	100	74.607	ENSMAMG00000002063	utp20	100	74.401	Mastacembelus_armatus
ENSPMGG00000004066	utp20	100	74.929	ENSMZEG00005018123	utp20	100	75.036	Maylandia_zebra
ENSPMGG00000004066	utp20	99	55.945	ENSMGAG00000011726	UTP20	100	55.990	Meleagris_gallopavo
ENSPMGG00000004066	utp20	65	53.271	ENSMAUG00000011898	Utp20	99	52.999	Mesocricetus_auratus
ENSPMGG00000004066	utp20	99	53.201	ENSMICG00000015736	UTP20	100	53.274	Microcebus_murinus
ENSPMGG00000004066	utp20	99	53.196	ENSMOCG00000015242	Utp20	100	53.025	Microtus_ochrogaster
ENSPMGG00000004066	utp20	99	69.838	ENSMMOG00000003360	utp20	100	69.694	Mola_mola
ENSPMGG00000004066	utp20	99	55.422	ENSMODG00000003141	UTP20	100	54.966	Monodelphis_domestica
ENSPMGG00000004066	utp20	100	74.195	ENSMALG00000002723	utp20	100	74.049	Monopterus_albus
ENSPMGG00000004066	utp20	99	54.552	MGP_CAROLIEiJ_G0015713	Utp20	100	54.155	Mus_caroli
ENSPMGG00000004066	utp20	99	54.655	ENSMUSG00000004356	Utp20	100	54.420	Mus_musculus
ENSPMGG00000004066	utp20	99	54.552	MGP_PahariEiJ_G0031372	Utp20	100	54.555	Mus_pahari
ENSPMGG00000004066	utp20	99	54.565	MGP_SPRETEiJ_G0016531	Utp20	93	71.429	Mus_spretus
ENSPMGG00000004066	utp20	100	55.291	ENSMPUG00000011641	UTP20	100	55.259	Mustela_putorius_furo
ENSPMGG00000004066	utp20	99	55.453	ENSMLUG00000002313	UTP20	100	54.906	Myotis_lucifugus
ENSPMGG00000004066	utp20	99	55.080	ENSNGAG00000013738	Utp20	100	54.597	Nannospalax_galili
ENSPMGG00000004066	utp20	80	94.030	ENSNBRG00000019464	utp20	99	94.030	Neolamprologus_brichardi
ENSPMGG00000004066	utp20	99	55.915	ENSNLEG00000006166	UTP20	100	55.670	Nomascus_leucogenys
ENSPMGG00000004066	utp20	89	81.481	ENSMEUG00000015457	UTP20	87	63.415	Notamacropus_eugenii
ENSPMGG00000004066	utp20	86	78.981	ENSOPRG00000010546	UTP20	87	78.981	Ochotona_princeps
ENSPMGG00000004066	utp20	100	54.750	ENSODEG00000013411	UTP20	100	54.360	Octodon_degus
ENSPMGG00000004066	utp20	100	75.450	ENSONIG00000009910	utp20	100	75.380	Oreochromis_niloticus
ENSPMGG00000004066	utp20	99	55.504	ENSOANG00000005578	UTP20	99	55.138	Ornithorhynchus_anatinus
ENSPMGG00000004066	utp20	99	54.904	ENSOCUG00000010475	UTP20	100	54.972	Oryctolagus_cuniculus
ENSPMGG00000004066	utp20	95	70.650	ENSORLG00000008900	utp20	99	70.650	Oryzias_latipes
ENSPMGG00000004066	utp20	95	70.133	ENSORLG00020005879	utp20	99	70.335	Oryzias_latipes_hni
ENSPMGG00000004066	utp20	98	68.957	ENSORLG00015002843	utp20	99	68.996	Oryzias_latipes_hsok
ENSPMGG00000004066	utp20	98	70.729	ENSOMEG00000023583	utp20	99	70.949	Oryzias_melastigma
ENSPMGG00000004066	utp20	99	55.014	ENSOGAG00000015130	UTP20	100	54.584	Otolemur_garnettii
ENSPMGG00000004066	utp20	99	55.912	ENSOARG00000014722	UTP20	100	55.631	Ovis_aries
ENSPMGG00000004066	utp20	99	55.575	ENSPPAG00000001381	UTP20	100	55.366	Pan_paniscus
ENSPMGG00000004066	utp20	99	55.231	ENSPPRG00000001026	UTP20	100	55.061	Panthera_pardus
ENSPMGG00000004066	utp20	99	55.192	ENSPTIG00000020972	UTP20	100	55.025	Panthera_tigris_altaica
ENSPMGG00000004066	utp20	99	55.646	ENSPTRG00000005349	UTP20	100	55.437	Pan_troglodytes
ENSPMGG00000004066	utp20	99	55.674	ENSPANG00000020388	UTP20	100	55.607	Papio_anubis
ENSPMGG00000004066	utp20	100	62.358	ENSPKIG00000007196	utp20	100	62.179	Paramormyrops_kingsleyae
ENSPMGG00000004066	utp20	94	55.991	ENSPSIG00000016689	UTP20	100	55.652	Pelodiscus_sinensis
ENSPMGG00000004066	utp20	99	54.863	ENSPEMG00000024120	Utp20	100	55.045	Peromyscus_maniculatus_bairdii
ENSPMGG00000004066	utp20	99	54.261	ENSPCIG00000009298	UTP20	100	54.068	Phascolarctos_cinereus
ENSPMGG00000004066	utp20	92	72.954	ENSPFOG00000003312	utp20	100	72.745	Poecilia_formosa
ENSPMGG00000004066	utp20	98	70.983	ENSPLAG00000012874	utp20	99	70.737	Poecilia_latipinna
ENSPMGG00000004066	utp20	95	76.416	ENSPMEG00000005915	utp20	99	76.519	Poecilia_mexicana
ENSPMGG00000004066	utp20	98	71.413	ENSPREG00000013285	utp20	99	71.250	Poecilia_reticulata
ENSPMGG00000004066	utp20	89	55.556	ENSPPYG00000004871	UTP20	100	55.359	Pongo_abelii
ENSPMGG00000004066	utp20	83	72.727	ENSPCAG00000012791	UTP20	82	72.727	Procavia_capensis
ENSPMGG00000004066	utp20	96	55.007	ENSPCOG00000024948	UTP20	100	55.007	Propithecus_coquereli
ENSPMGG00000004066	utp20	99	55.382	ENSPVAG00000008113	UTP20	100	55.030	Pteropus_vampyrus
ENSPMGG00000004066	utp20	100	74.212	ENSPNYG00000011561	utp20	100	74.212	Pundamilia_nyererei
ENSPMGG00000004066	utp20	100	64.349	ENSPNAG00000006176	utp20	100	64.306	Pygocentrus_nattereri
ENSPMGG00000004066	utp20	99	54.865	ENSRNOG00000005823	Utp20	100	54.452	Rattus_norvegicus
ENSPMGG00000004066	utp20	99	54.704	ENSRBIG00000025384	UTP20	100	54.245	Rhinopithecus_bieti
ENSPMGG00000004066	utp20	99	55.710	ENSRROG00000041254	UTP20	100	55.643	Rhinopithecus_roxellana
ENSPMGG00000004066	utp20	99	55.623	ENSSBOG00000035762	UTP20	100	55.378	Saimiri_boliviensis_boliviensis
ENSPMGG00000004066	utp20	98	54.021	ENSSHAG00000002298	UTP20	99	53.765	Sarcophilus_harrisii
ENSPMGG00000004066	utp20	99	63.711	ENSSFOG00015001674	utp20	100	63.539	Scleropages_formosus
ENSPMGG00000004066	utp20	98	73.446	ENSSMAG00000016460	utp20	99	73.436	Scophthalmus_maximus
ENSPMGG00000004066	utp20	100	76.717	ENSSDUG00000013730	utp20	100	76.286	Seriola_dumerili
ENSPMGG00000004066	utp20	100	77.176	ENSSLDG00000012844	utp20	100	77.111	Seriola_lalandi_dorsalis
ENSPMGG00000004066	utp20	60	75.000	ENSSARG00000002796	-	59	75.000	Sorex_araneus
ENSPMGG00000004066	utp20	99	54.941	ENSSPUG00000004513	UTP20	99	54.392	Sphenodon_punctatus
ENSPMGG00000004066	utp20	100	74.420	ENSSPAG00000014674	utp20	100	74.313	Stegastes_partitus
ENSPMGG00000004066	utp20	99	55.342	ENSSSCG00000000869	UTP20	100	55.397	Sus_scrofa
ENSPMGG00000004066	utp20	77	55.304	ENSTGUG00000009053	-	100	55.007	Taeniopygia_guttata
ENSPMGG00000004066	utp20	99	75.188	ENSTRUG00000005849	utp20	99	75.261	Takifugu_rubripes
ENSPMGG00000004066	utp20	99	73.000	ENSTNIG00000006921	utp20	100	72.935	Tetraodon_nigroviridis
ENSPMGG00000004066	utp20	90	54.072	ENSTBEG00000011917	UTP20	91	53.693	Tupaia_belangeri
ENSPMGG00000004066	utp20	97	55.778	ENSTTRG00000017195	UTP20	97	55.741	Tursiops_truncatus
ENSPMGG00000004066	utp20	99	55.394	ENSUAMG00000016363	UTP20	100	55.216	Ursus_americanus
ENSPMGG00000004066	utp20	99	54.862	ENSUMAG00000000077	UTP20	100	54.684	Ursus_maritimus
ENSPMGG00000004066	utp20	88	57.025	ENSVPAG00000011620	UTP20	92	57.025	Vicugna_pacos
ENSPMGG00000004066	utp20	99	55.271	ENSVVUG00000018110	UTP20	100	54.895	Vulpes_vulpes
ENSPMGG00000004066	utp20	98	54.723	ENSXETG00000032346	UTP20	100	54.496	Xenopus_tropicalis
ENSPMGG00000004066	utp20	98	70.731	ENSXMAG00000006503	utp20	99	70.657	Xiphophorus_maculatus