EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMGG00000004127 (Gene tree)
Gene ID: -
Gene Symbol: srp54
Alias: -
Full Name: signal recognition particle 54
Gene Type: protein_coding
Species: Periophthalmus_magnuspinnatus
Status: putative
Strand: Minus strand
Length: 11400 bases
Position: chrKN460390.1:202167-213566
Accession: ZDB-GENE-040426-818
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMGP00000004885	SRP54	PF00448.22	6.9e-75	1	1
ENSPMGP00000004885	SRP54_N	PF02881.19	3.2e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMGT00000005183	-	1383	-	ENSPMGP00000004885	460 (aa)	-	-

Gene Model

Click here to download ENSPMGG00000004127's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMGG00000004127's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMGG00000004127	srp54	99	93.043	ENSG00000100883	SRP54	100	97.674	Homo_sapiens
ENSPMGG00000004127	srp54	99	96.304	ENSAPOG00000011314	srp54	91	96.304	Acanthochromis_polyacanthus
ENSPMGG00000004127	srp54	99	93.043	ENSAMEG00000015544	SRP54	91	93.043	Ailuropoda_melanoleuca
ENSPMGG00000004127	srp54	97	97.773	ENSACIG00000022831	srp54	97	97.773	Amphilophus_citrinellus
ENSPMGG00000004127	srp54	99	96.304	ENSAOCG00000019401	srp54	91	96.304	Amphiprion_ocellaris
ENSPMGG00000004127	srp54	99	96.304	ENSAPEG00000001977	srp54	91	96.304	Amphiprion_percula
ENSPMGG00000004127	srp54	99	96.304	ENSATEG00000013877	srp54	91	96.304	Anabas_testudineus
ENSPMGG00000004127	srp54	99	92.174	ENSAPLG00000010125	SRP54	92	92.174	Anas_platyrhynchos
ENSPMGG00000004127	srp54	60	76.344	ENSACAG00000001124	-	84	76.344	Anolis_carolinensis
ENSPMGG00000004127	srp54	85	87.692	ENSACAG00000010631	-	90	87.692	Anolis_carolinensis
ENSPMGG00000004127	srp54	99	91.739	ENSACAG00000002103	-	91	91.739	Anolis_carolinensis
ENSPMGG00000004127	srp54	99	93.043	ENSANAG00000022133	SRP54	91	93.043	Aotus_nancymaae
ENSPMGG00000004127	srp54	99	96.087	ENSACLG00000015866	srp54	91	96.087	Astatotilapia_calliptera
ENSPMGG00000004127	srp54	99	94.565	ENSAMXG00000032669	SRP54	91	94.565	Astyanax_mexicanus
ENSPMGG00000004127	srp54	99	93.043	ENSBTAG00000019085	SRP54	91	93.043	Bos_taurus
ENSPMGG00000004127	srp54	99	72.174	WBGene00009012	F21D5.7	93	72.174	Caenorhabditis_elegans
ENSPMGG00000004127	srp54	99	93.043	ENSCJAG00000006581	SRP54	91	93.043	Callithrix_jacchus
ENSPMGG00000004127	srp54	99	93.043	ENSCAFG00000013331	SRP54	91	93.043	Canis_familiaris
ENSPMGG00000004127	srp54	99	93.043	ENSCAFG00020023427	SRP54	91	93.043	Canis_lupus_dingo
ENSPMGG00000004127	srp54	99	93.043	ENSCHIG00000026345	SRP54	91	93.043	Capra_hircus
ENSPMGG00000004127	srp54	99	82.353	ENSTSYG00000035333	-	91	82.353	Carlito_syrichta
ENSPMGG00000004127	srp54	99	92.826	ENSTSYG00000002680	-	91	92.826	Carlito_syrichta
ENSPMGG00000004127	srp54	83	66.500	ENSCAPG00000008780	SRP54	84	66.500	Cavia_aperea
ENSPMGG00000004127	srp54	99	92.609	ENSCPOG00000003691	SRP54	91	92.609	Cavia_porcellus
ENSPMGG00000004127	srp54	89	91.755	ENSCCAG00000024179	SRP54	90	91.755	Cebus_capucinus
ENSPMGG00000004127	srp54	99	93.043	ENSCATG00000034083	SRP54	91	93.043	Cercocebus_atys
ENSPMGG00000004127	srp54	99	93.043	ENSCLAG00000015076	SRP54	91	93.043	Chinchilla_lanigera
ENSPMGG00000004127	srp54	99	93.043	ENSCSAG00000015575	SRP54	91	93.043	Chlorocebus_sabaeus
ENSPMGG00000004127	srp54	99	81.739	ENSCHOG00000008986	SRP54	96	81.739	Choloepus_hoffmanni
ENSPMGG00000004127	srp54	99	92.391	ENSCPBG00000026195	SRP54	91	92.391	Chrysemys_picta_bellii
ENSPMGG00000004127	srp54	98	83.260	ENSCING00000007380	-	90	83.260	Ciona_intestinalis
ENSPMGG00000004127	srp54	99	93.043	ENSCANG00000028532	SRP54	91	93.043	Colobus_angolensis_palliatus
ENSPMGG00000004127	srp54	99	93.043	ENSCGRG00001009525	-	91	93.043	Cricetulus_griseus_chok1gshd
ENSPMGG00000004127	srp54	83	96.104	ENSCGRG00000009453	-	89	96.104	Cricetulus_griseus_crigri
ENSPMGG00000004127	srp54	99	95.652	ENSCSEG00000012392	srp54	91	95.652	Cynoglossus_semilaevis
ENSPMGG00000004127	srp54	99	96.304	ENSCVAG00000010395	srp54	91	96.304	Cyprinodon_variegatus
ENSPMGG00000004127	srp54	99	95.435	ENSDARG00000098367	srp54	91	95.435	Danio_rerio
ENSPMGG00000004127	srp54	99	93.043	ENSDNOG00000032525	SRP54	91	93.043	Dasypus_novemcinctus
ENSPMGG00000004127	srp54	99	79.610	ENSDORG00000005159	-	99	79.610	Dipodomys_ordii
ENSPMGG00000004127	srp54	99	77.391	FBgn0010747	Srp54k	91	77.391	Drosophila_melanogaster
ENSPMGG00000004127	srp54	81	52.406	ENSETEG00000012102	-	89	52.406	Echinops_telfairi
ENSPMGG00000004127	srp54	99	91.739	ENSETEG00000016307	-	91	91.739	Echinops_telfairi
ENSPMGG00000004127	srp54	98	89.207	ENSEBUG00000009437	-	90	89.207	Eptatretus_burgeri
ENSPMGG00000004127	srp54	99	93.043	ENSEASG00005002057	SRP54	91	93.043	Equus_asinus_asinus
ENSPMGG00000004127	srp54	99	93.043	ENSECAG00000018042	SRP54	91	93.043	Equus_caballus
ENSPMGG00000004127	srp54	99	75.652	ENSEEUG00000001511	SRP54	91	75.652	Erinaceus_europaeus
ENSPMGG00000004127	srp54	99	94.783	ENSELUG00000003395	srp54	91	94.783	Esox_lucius
ENSPMGG00000004127	srp54	99	92.826	ENSFCAG00000032033	SRP54	91	92.826	Felis_catus
ENSPMGG00000004127	srp54	99	92.174	ENSFALG00000005995	SRP54	91	92.174	Ficedula_albicollis
ENSPMGG00000004127	srp54	99	93.043	ENSFDAG00000016767	SRP54	92	93.043	Fukomys_damarensis
ENSPMGG00000004127	srp54	99	96.087	ENSFHEG00000004263	srp54	97	92.461	Fundulus_heteroclitus
ENSPMGG00000004127	srp54	94	88.940	ENSGMOG00000011391	srp54	91	88.940	Gadus_morhua
ENSPMGG00000004127	srp54	99	92.174	ENSGALG00000023135	SRP54	91	92.174	Gallus_gallus
ENSPMGG00000004127	srp54	99	96.522	ENSGAFG00000011586	srp54	91	96.522	Gambusia_affinis
ENSPMGG00000004127	srp54	99	95.435	ENSGACG00000004181	srp54	100	98.387	Gasterosteus_aculeatus
ENSPMGG00000004127	srp54	99	92.391	ENSGAGG00000014766	SRP54	91	92.391	Gopherus_agassizii
ENSPMGG00000004127	srp54	99	93.043	ENSGGOG00000002926	SRP54	91	93.043	Gorilla_gorilla
ENSPMGG00000004127	srp54	99	96.087	ENSHBUG00000005678	srp54	91	96.087	Haplochromis_burtoni
ENSPMGG00000004127	srp54	99	93.043	ENSHGLG00000002850	SRP54	91	93.043	Heterocephalus_glaber_female
ENSPMGG00000004127	srp54	99	93.043	ENSHGLG00100005263	SRP54	91	93.043	Heterocephalus_glaber_male
ENSPMGG00000004127	srp54	98	63.797	ENSHGLG00100007281	-	89	63.797	Heterocephalus_glaber_male
ENSPMGG00000004127	srp54	99	94.130	ENSHCOG00000021127	srp54	91	94.130	Hippocampus_comes
ENSPMGG00000004127	srp54	99	94.565	ENSIPUG00000001420	srp54	91	94.565	Ictalurus_punctatus
ENSPMGG00000004127	srp54	99	93.043	ENSSTOG00000016023	SRP54	91	93.043	Ictidomys_tridecemlineatus
ENSPMGG00000004127	srp54	99	87.826	ENSJJAG00000013417	-	91	87.826	Jaculus_jaculus
ENSPMGG00000004127	srp54	86	69.367	ENSJJAG00000016404	-	88	69.367	Jaculus_jaculus
ENSPMGG00000004127	srp54	99	95.870	ENSKMAG00000007707	srp54	91	95.870	Kryptolebias_marmoratus
ENSPMGG00000004127	srp54	99	96.304	ENSLBEG00000021122	srp54	91	96.304	Labrus_bergylta
ENSPMGG00000004127	srp54	99	96.304	ENSLBEG00000018690	srp54	91	96.304	Labrus_bergylta
ENSPMGG00000004127	srp54	99	92.174	ENSLACG00000017890	SRP54	91	92.174	Latimeria_chalumnae
ENSPMGG00000004127	srp54	99	94.783	ENSLOCG00000009440	srp54	91	94.783	Lepisosteus_oculatus
ENSPMGG00000004127	srp54	99	93.043	ENSLAFG00000012007	SRP54	91	93.043	Loxodonta_africana
ENSPMGG00000004127	srp54	99	93.043	ENSMFAG00000044371	SRP54	91	93.043	Macaca_fascicularis
ENSPMGG00000004127	srp54	99	93.043	ENSMMUG00000015073	FAM177A1	91	93.043	Macaca_mulatta
ENSPMGG00000004127	srp54	99	93.043	ENSMNEG00000006947	SRP54	91	93.043	Macaca_nemestrina
ENSPMGG00000004127	srp54	99	93.043	ENSMLEG00000042251	SRP54	91	93.043	Mandrillus_leucophaeus
ENSPMGG00000004127	srp54	99	96.087	ENSMAMG00000004803	srp54	91	96.087	Mastacembelus_armatus
ENSPMGG00000004127	srp54	99	96.087	ENSMZEG00005027528	srp54	91	96.087	Maylandia_zebra
ENSPMGG00000004127	srp54	99	87.229	ENSMGAG00000012481	SRP54	91	87.229	Meleagris_gallopavo
ENSPMGG00000004127	srp54	99	93.261	ENSMAUG00000014447	-	91	93.261	Mesocricetus_auratus
ENSPMGG00000004127	srp54	99	93.043	ENSMICG00000010270	SRP54	91	93.043	Microcebus_murinus
ENSPMGG00000004127	srp54	86	92.424	ENSMOCG00000000948	-	90	92.424	Microtus_ochrogaster
ENSPMGG00000004127	srp54	97	98.202	ENSMMOG00000020303	srp54	97	98.202	Mola_mola
ENSPMGG00000004127	srp54	99	93.043	ENSMODG00000023150	-	91	93.043	Monodelphis_domestica
ENSPMGG00000004127	srp54	99	93.043	ENSMODG00000012925	-	91	93.043	Monodelphis_domestica
ENSPMGG00000004127	srp54	96	98.646	ENSMALG00000009163	srp54	98	98.646	Monopterus_albus
ENSPMGG00000004127	srp54	99	93.261	MGP_CAROLIEiJ_G0017754	-	91	93.261	Mus_caroli
ENSPMGG00000004127	srp54	99	93.261	ENSMUSG00000112449	Srp54b	92	92.857	Mus_musculus
ENSPMGG00000004127	srp54	99	92.391	ENSMUSG00000079108	Srp54c	91	92.391	Mus_musculus
ENSPMGG00000004127	srp54	99	93.261	ENSMUSG00000073079	Srp54a	100	97.273	Mus_musculus
ENSPMGG00000004127	srp54	99	93.261	MGP_PahariEiJ_G0029510	-	91	93.261	Mus_pahari
ENSPMGG00000004127	srp54	99	93.043	ENSMPUG00000016302	SRP54	91	93.043	Mustela_putorius_furo
ENSPMGG00000004127	srp54	99	92.391	ENSMLUG00000008958	SRP54	91	92.391	Myotis_lucifugus
ENSPMGG00000004127	srp54	99	83.043	ENSNGAG00000019806	-	90	83.043	Nannospalax_galili
ENSPMGG00000004127	srp54	86	95.455	ENSNBRG00000006000	srp54	90	95.455	Neolamprologus_brichardi
ENSPMGG00000004127	srp54	99	93.043	ENSNLEG00000003496	SRP54	91	93.043	Nomascus_leucogenys
ENSPMGG00000004127	srp54	73	98.214	ENSMEUG00000000138	-	76	98.214	Notamacropus_eugenii
ENSPMGG00000004127	srp54	99	93.043	ENSODEG00000004865	SRP54	91	93.043	Octodon_degus
ENSPMGG00000004127	srp54	99	96.087	ENSONIG00000011768	srp54	91	96.087	Oreochromis_niloticus
ENSPMGG00000004127	srp54	99	93.043	ENSOANG00000014051	SRP54	91	93.043	Ornithorhynchus_anatinus
ENSPMGG00000004127	srp54	97	94.855	ENSOCUG00000007838	SRP54	89	94.855	Oryctolagus_cuniculus
ENSPMGG00000004127	srp54	99	95.870	ENSORLG00000010027	srp54	91	95.870	Oryzias_latipes
ENSPMGG00000004127	srp54	99	95.870	ENSORLG00020001878	srp54	91	95.870	Oryzias_latipes_hni
ENSPMGG00000004127	srp54	99	95.870	ENSORLG00015021866	srp54	91	95.870	Oryzias_latipes_hsok
ENSPMGG00000004127	srp54	99	95.652	ENSOMEG00000020952	srp54	91	95.652	Oryzias_melastigma
ENSPMGG00000004127	srp54	99	93.043	ENSOGAG00000012188	SRP54	91	93.043	Otolemur_garnettii
ENSPMGG00000004127	srp54	99	93.043	ENSOARG00000007160	SRP54	91	93.043	Ovis_aries
ENSPMGG00000004127	srp54	99	93.043	ENSPPAG00000017434	SRP54	91	93.043	Pan_paniscus
ENSPMGG00000004127	srp54	99	91.957	ENSPPRG00000014047	SRP54	91	91.957	Panthera_pardus
ENSPMGG00000004127	srp54	99	92.826	ENSPTIG00000000744	SRP54	87	92.826	Panthera_tigris_altaica
ENSPMGG00000004127	srp54	99	93.043	ENSPTRG00000006259	FAM177A1	91	93.043	Pan_troglodytes
ENSPMGG00000004127	srp54	99	93.043	ENSPANG00000023853	SRP54	91	93.043	Papio_anubis
ENSPMGG00000004127	srp54	99	95.186	ENSPKIG00000001953	srp54	91	95.186	Paramormyrops_kingsleyae
ENSPMGG00000004127	srp54	99	92.779	ENSPSIG00000006476	SRP54	91	92.779	Pelodiscus_sinensis
ENSPMGG00000004127	srp54	97	83.221	ENSPEMG00000019634	-	97	78.091	Peromyscus_maniculatus_bairdii
ENSPMGG00000004127	srp54	98	91.410	ENSPMAG00000006078	-	90	91.410	Petromyzon_marinus
ENSPMGG00000004127	srp54	99	93.043	ENSPCIG00000016175	SRP54	91	93.043	Phascolarctos_cinereus
ENSPMGG00000004127	srp54	99	96.522	ENSPFOG00000008870	srp54	91	96.522	Poecilia_formosa
ENSPMGG00000004127	srp54	99	96.522	ENSPLAG00000009889	srp54	91	96.522	Poecilia_latipinna
ENSPMGG00000004127	srp54	99	96.522	ENSPMEG00000008601	srp54	91	96.522	Poecilia_mexicana
ENSPMGG00000004127	srp54	99	96.522	ENSPREG00000004505	srp54	91	96.522	Poecilia_reticulata
ENSPMGG00000004127	srp54	99	87.609	ENSPPYG00000005739	SRP54	91	87.609	Pongo_abelii
ENSPMGG00000004127	srp54	99	89.130	ENSPCAG00000006268	SRP54	91	89.130	Procavia_capensis
ENSPMGG00000004127	srp54	99	90.889	ENSPCOG00000022473	SRP54	91	90.889	Propithecus_coquereli
ENSPMGG00000004127	srp54	69	97.872	ENSPVAG00000010056	SRP54	82	97.872	Pteropus_vampyrus
ENSPMGG00000004127	srp54	99	96.087	ENSPNYG00000009717	srp54	91	96.087	Pundamilia_nyererei
ENSPMGG00000004127	srp54	99	94.783	ENSPNAG00000008544	srp54	91	94.783	Pygocentrus_nattereri
ENSPMGG00000004127	srp54	99	93.043	ENSRNOG00000032776	Srp54a	91	93.043	Rattus_norvegicus
ENSPMGG00000004127	srp54	99	93.043	ENSRROG00000041292	SRP54	91	93.043	Rhinopithecus_roxellana
ENSPMGG00000004127	srp54	94	51.474	YPR088C	SRP54	81	51.474	Saccharomyces_cerevisiae
ENSPMGG00000004127	srp54	95	91.781	ENSSBOG00000035145	SRP54	91	92.558	Saimiri_boliviensis_boliviensis
ENSPMGG00000004127	srp54	65	90.635	ENSSHAG00000000671	SRP54	87	90.635	Sarcophilus_harrisii
ENSPMGG00000004127	srp54	99	95.000	ENSSFOG00015013920	srp54	91	95.000	Scleropages_formosus
ENSPMGG00000004127	srp54	99	95.435	ENSSMAG00000002441	srp54	86	95.435	Scophthalmus_maximus
ENSPMGG00000004127	srp54	99	95.652	ENSSDUG00000018586	srp54	91	95.652	Seriola_dumerili
ENSPMGG00000004127	srp54	99	95.870	ENSSLDG00000010476	srp54	91	95.870	Seriola_lalandi_dorsalis
ENSPMGG00000004127	srp54	99	93.043	ENSSARG00000002744	SRP54	91	93.043	Sorex_araneus
ENSPMGG00000004127	srp54	99	92.391	ENSSPUG00000013101	SRP54	91	92.391	Sphenodon_punctatus
ENSPMGG00000004127	srp54	99	96.304	ENSSPAG00000002354	srp54	91	96.304	Stegastes_partitus
ENSPMGG00000004127	srp54	99	93.043	ENSSSCG00000001955	SRP54	91	93.043	Sus_scrofa
ENSPMGG00000004127	srp54	99	92.174	ENSTGUG00000011945	-	92	92.174	Taeniopygia_guttata
ENSPMGG00000004127	srp54	99	95.435	ENSTRUG00000007057	srp54	91	95.435	Takifugu_rubripes
ENSPMGG00000004127	srp54	99	94.783	ENSTNIG00000002589	srp54	91	94.783	Tetraodon_nigroviridis
ENSPMGG00000004127	srp54	87	82.878	ENSTBEG00000011409	SRP54	90	82.878	Tupaia_belangeri
ENSPMGG00000004127	srp54	99	83.043	ENSTTRG00000000928	SRP54	91	83.043	Tursiops_truncatus
ENSPMGG00000004127	srp54	57	96.565	ENSUAMG00000012385	SRP54	100	96.565	Ursus_americanus
ENSPMGG00000004127	srp54	99	93.043	ENSUMAG00000011234	SRP54	91	93.043	Ursus_maritimus
ENSPMGG00000004127	srp54	99	92.826	ENSVPAG00000005668	SRP54	97	92.826	Vicugna_pacos
ENSPMGG00000004127	srp54	99	93.043	ENSVVUG00000019962	SRP54	91	93.043	Vulpes_vulpes
ENSPMGG00000004127	srp54	99	76.458	ENSXETG00000012290	srp54	91	76.496	Xenopus_tropicalis
ENSPMGG00000004127	srp54	96	99.550	ENSXCOG00000004658	srp54	97	99.550	Xiphophorus_couchianus
ENSPMGG00000004127	srp54	99	96.522	ENSXMAG00000018315	srp54	91	96.522	Xiphophorus_maculatus