EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMGG00000004184 (Gene tree)
Gene ID: -
Gene Symbol: yrdc
Alias: -
Full Name: yrdC N(6)-threonylcarbamoyltransferase domain containing
Gene Type: protein_coding
Species: Periophthalmus_magnuspinnatus
Status: putative
Strand: Plus strand
Length: 6538 bases
Position: chrKN466267.1:179494-186031
Accession: ZDB-GENE-070410-65
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMGP00000004973	Sua5_yciO_yrdC	PF01300.18	5.1e-51	1	1
ENSPMGP00000004975	Sua5_yciO_yrdC	PF01300.18	6.7e-51	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMGT00000005277	-	825	-	ENSPMGP00000004975	274 (aa)	-	-
ENSPMGT00000005275	-	774	-	ENSPMGP00000004973	257 (aa)	-	-

Gene Model

Click here to download ENSPMGG00000004184's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMGG00000004184's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMGG00000004184	yrdc	86	57.965	ENSG00000196449	YRDC	81	57.965	Homo_sapiens
ENSPMGG00000004184	yrdc	95	79.424	ENSAPOG00000024293	yrdc	93	79.424	Acanthochromis_polyacanthus
ENSPMGG00000004184	yrdc	70	63.388	ENSAMEG00000001173	YRDC	97	63.388	Ailuropoda_melanoleuca
ENSPMGG00000004184	yrdc	92	79.661	ENSACIG00000017330	yrdc	97	74.615	Amphilophus_citrinellus
ENSPMGG00000004184	yrdc	95	80.247	ENSAOCG00000021647	yrdc	93	80.247	Amphiprion_ocellaris
ENSPMGG00000004184	yrdc	95	79.835	ENSAPEG00000006164	yrdc	93	79.835	Amphiprion_percula
ENSPMGG00000004184	yrdc	94	79.339	ENSATEG00000010086	yrdc	98	75.479	Anabas_testudineus
ENSPMGG00000004184	yrdc	74	61.856	ENSACAG00000017203	YRDC	92	62.245	Anolis_carolinensis
ENSPMGG00000004184	yrdc	77	61.084	ENSANAG00000028788	-	86	61.084	Aotus_nancymaae
ENSPMGG00000004184	yrdc	86	54.386	ENSANAG00000031052	-	83	54.386	Aotus_nancymaae
ENSPMGG00000004184	yrdc	96	77.328	ENSACLG00000027775	yrdc	93	76.892	Astatotilapia_calliptera
ENSPMGG00000004184	yrdc	98	68.127	ENSAMXG00000037791	yrdc	93	69.264	Astyanax_mexicanus
ENSPMGG00000004184	yrdc	86	57.522	ENSBTAG00000006510	YRDC	82	57.522	Bos_taurus
ENSPMGG00000004184	yrdc	72	40.000	WBGene00012997	Y48C3A.18	94	40.441	Caenorhabditis_elegans
ENSPMGG00000004184	yrdc	86	57.522	ENSCJAG00000002078	YRDC	62	57.522	Callithrix_jacchus
ENSPMGG00000004184	yrdc	86	56.637	ENSCAFG00000003253	YRDC	82	56.637	Canis_familiaris
ENSPMGG00000004184	yrdc	86	57.522	ENSCAFG00020007843	YRDC	82	57.522	Canis_lupus_dingo
ENSPMGG00000004184	yrdc	86	57.965	ENSCHIG00000007882	YRDC	82	57.965	Capra_hircus
ENSPMGG00000004184	yrdc	65	64.118	ENSTSYG00000005555	YRDC	61	64.118	Carlito_syrichta
ENSPMGG00000004184	yrdc	86	58.407	ENSCPOG00000036144	YRDC	81	58.407	Cavia_porcellus
ENSPMGG00000004184	yrdc	86	57.522	ENSCCAG00000028891	YRDC	81	57.522	Cebus_capucinus
ENSPMGG00000004184	yrdc	86	56.195	ENSCATG00000036928	YRDC	81	57.522	Cercocebus_atys
ENSPMGG00000004184	yrdc	73	65.625	ENSCLAG00000015012	YRDC	81	58.850	Chinchilla_lanigera
ENSPMGG00000004184	yrdc	86	56.195	ENSCSAG00000001116	YRDC	81	57.522	Chlorocebus_sabaeus
ENSPMGG00000004184	yrdc	62	55.625	ENSCHOG00000005500	YRDC	77	55.625	Choloepus_hoffmanni
ENSPMGG00000004184	yrdc	79	61.836	ENSCPBG00000018446	YRDC	88	61.836	Chrysemys_picta_bellii
ENSPMGG00000004184	yrdc	78	51.643	ENSCING00000007564	-	98	51.643	Ciona_intestinalis
ENSPMGG00000004184	yrdc	78	49.524	ENSCSAVG00000009982	-	98	49.524	Ciona_savignyi
ENSPMGG00000004184	yrdc	86	56.637	ENSCANG00000031111	YRDC	81	57.965	Colobus_angolensis_palliatus
ENSPMGG00000004184	yrdc	78	56.373	ENSCGRG00001000829	-	56	56.373	Cricetulus_griseus_chok1gshd
ENSPMGG00000004184	yrdc	82	59.908	ENSCGRG00001014496	-	78	59.908	Cricetulus_griseus_chok1gshd
ENSPMGG00000004184	yrdc	80	80.000	ENSCSEG00000019075	yrdc	91	70.161	Cynoglossus_semilaevis
ENSPMGG00000004184	yrdc	94	75.104	ENSCVAG00000017355	yrdc	99	70.412	Cyprinodon_variegatus
ENSPMGG00000004184	yrdc	91	68.085	ENSDARG00000041428	yrdc	98	68.085	Danio_rerio
ENSPMGG00000004184	yrdc	86	56.637	ENSDNOG00000038789	-	82	56.190	Dasypus_novemcinctus
ENSPMGG00000004184	yrdc	74	46.193	ENSDNOG00000036198	-	97	45.813	Dasypus_novemcinctus
ENSPMGG00000004184	yrdc	72	65.608	ENSDORG00000008788	Yrdc	84	65.608	Dipodomys_ordii
ENSPMGG00000004184	yrdc	88	46.835	FBgn0061361	CG33786	96	46.835	Drosophila_melanogaster
ENSPMGG00000004184	yrdc	86	45.575	ENSETEG00000003442	YRDC	81	45.575	Echinops_telfairi
ENSPMGG00000004184	yrdc	92	51.695	ENSEBUG00000014080	yrdc	99	51.695	Eptatretus_burgeri
ENSPMGG00000004184	yrdc	88	58.515	ENSEASG00005012253	YRDC	81	58.261	Equus_asinus_asinus
ENSPMGG00000004184	yrdc	86	58.850	ENSECAG00000022522	YRDC	81	58.850	Equus_caballus
ENSPMGG00000004184	yrdc	93	75.720	ENSELUG00000018071	yrdc	87	70.189	Esox_lucius
ENSPMGG00000004184	yrdc	86	57.080	ENSFCAG00000011018	YRDC	81	57.080	Felis_catus
ENSPMGG00000004184	yrdc	72	66.667	ENSFALG00000000964	YRDC	88	66.146	Ficedula_albicollis
ENSPMGG00000004184	yrdc	96	71.660	ENSFHEG00000001029	yrdc	94	70.815	Fundulus_heteroclitus
ENSPMGG00000004184	yrdc	80	77.561	ENSGMOG00000015635	yrdc	99	77.561	Gadus_morhua
ENSPMGG00000004184	yrdc	78	64.706	ENSGALG00000029001	YRDC	80	64.706	Gallus_gallus
ENSPMGG00000004184	yrdc	70	30.769	ENSGALG00000025899	-	64	30.769	Gallus_gallus
ENSPMGG00000004184	yrdc	95	74.180	ENSGAFG00000008396	yrdc	95	72.047	Gambusia_affinis
ENSPMGG00000004184	yrdc	91	77.637	ENSGACG00000013878	yrdc	98	77.637	Gasterosteus_aculeatus
ENSPMGG00000004184	yrdc	87	60.793	ENSGAGG00000014968	YRDC	98	60.793	Gopherus_agassizii
ENSPMGG00000004184	yrdc	86	57.965	ENSGGOG00000007619	YRDC	81	57.965	Gorilla_gorilla
ENSPMGG00000004184	yrdc	94	78.926	ENSHBUG00000009298	yrdc	93	77.291	Haplochromis_burtoni
ENSPMGG00000004184	yrdc	86	58.407	ENSHGLG00000014075	YRDC	81	58.407	Heterocephalus_glaber_female
ENSPMGG00000004184	yrdc	77	62.562	ENSHGLG00100002734	YRDC	73	62.562	Heterocephalus_glaber_male
ENSPMGG00000004184	yrdc	92	70.763	ENSHCOG00000006598	yrdc	92	70.763	Hippocampus_comes
ENSPMGG00000004184	yrdc	91	73.617	ENSIPUG00000014985	yrdc	97	73.617	Ictalurus_punctatus
ENSPMGG00000004184	yrdc	86	59.735	ENSSTOG00000001643	YRDC	81	59.735	Ictidomys_tridecemlineatus
ENSPMGG00000004184	yrdc	95	76.639	ENSKMAG00000013468	yrdc	99	72.453	Kryptolebias_marmoratus
ENSPMGG00000004184	yrdc	96	79.757	ENSLBEG00000027501	yrdc	99	75.564	Labrus_bergylta
ENSPMGG00000004184	yrdc	95	57.422	ENSLACG00000010689	YRDC	96	64.423	Latimeria_chalumnae
ENSPMGG00000004184	yrdc	69	33.679	ENSLACG00000017624	si:ch211-153b23.3	58	33.679	Latimeria_chalumnae
ENSPMGG00000004184	yrdc	90	66.949	ENSLOCG00000003321	yrdc	97	66.949	Lepisosteus_oculatus
ENSPMGG00000004184	yrdc	78	61.765	ENSLAFG00000017556	YRDC	73	61.765	Loxodonta_africana
ENSPMGG00000004184	yrdc	78	59.804	ENSMFAG00000003487	YRDC	96	61.275	Macaca_fascicularis
ENSPMGG00000004184	yrdc	86	56.195	ENSMMUG00000005372	YRDC	60	57.522	Macaca_mulatta
ENSPMGG00000004184	yrdc	86	56.195	ENSMNEG00000029348	YRDC	81	57.522	Macaca_nemestrina
ENSPMGG00000004184	yrdc	54	64.085	ENSMLEG00000041122	YRDC	94	66.197	Mandrillus_leucophaeus
ENSPMGG00000004184	yrdc	96	76.518	ENSMAMG00000007315	yrdc	97	73.946	Mastacembelus_armatus
ENSPMGG00000004184	yrdc	96	77.328	ENSMZEG00005006948	yrdc	93	76.892	Maylandia_zebra
ENSPMGG00000004184	yrdc	75	66.667	ENSMGAG00000002833	YRDC	97	66.667	Meleagris_gallopavo
ENSPMGG00000004184	yrdc	86	58.850	ENSMICG00000031688	YRDC	81	58.850	Microcebus_murinus
ENSPMGG00000004184	yrdc	60	55.844	ENSMOCG00000000164	-	60	55.844	Microtus_ochrogaster
ENSPMGG00000004184	yrdc	96	75.709	ENSMMOG00000002119	yrdc	98	72.519	Mola_mola
ENSPMGG00000004184	yrdc	81	63.679	ENSMODG00000017750	YRDC	74	63.679	Monodelphis_domestica
ENSPMGG00000004184	yrdc	95	77.049	ENSMALG00000012471	yrdc	97	73.745	Monopterus_albus
ENSPMGG00000004184	yrdc	72	62.766	MGP_CAROLIEiJ_G0026453	Yrdc	98	67.961	Mus_caroli
ENSPMGG00000004184	yrdc	78	62.255	ENSMUSG00000028889	Yrdc	100	68.571	Mus_musculus
ENSPMGG00000004184	yrdc	88	58.261	MGP_PahariEiJ_G0028784	Yrdc	100	68.571	Mus_pahari
ENSPMGG00000004184	yrdc	78	62.255	MGP_SPRETEiJ_G0027432	Yrdc	73	62.255	Mus_spretus
ENSPMGG00000004184	yrdc	77	61.881	ENSMPUG00000014542	YRDC	81	61.881	Mustela_putorius_furo
ENSPMGG00000004184	yrdc	86	59.292	ENSMLUG00000000955	-	81	59.292	Myotis_lucifugus
ENSPMGG00000004184	yrdc	78	53.431	ENSMLUG00000028796	-	73	53.431	Myotis_lucifugus
ENSPMGG00000004184	yrdc	75	59.898	ENSMLUG00000024310	-	97	59.898	Myotis_lucifugus
ENSPMGG00000004184	yrdc	79	61.058	ENSNGAG00000019099	Yrdc	74	61.058	Nannospalax_galili
ENSPMGG00000004184	yrdc	96	77.733	ENSNBRG00000009475	yrdc	94	77.689	Neolamprologus_brichardi
ENSPMGG00000004184	yrdc	80	60.766	ENSNLEG00000011665	YRDC	75	60.766	Nomascus_leucogenys
ENSPMGG00000004184	yrdc	81	62.736	ENSMEUG00000005068	YRDC	97	62.736	Notamacropus_eugenii
ENSPMGG00000004184	yrdc	88	59.389	ENSODEG00000007401	YRDC	100	68.571	Octodon_degus
ENSPMGG00000004184	yrdc	91	82.479	ENSONIG00000016213	yrdc	98	82.479	Oreochromis_niloticus
ENSPMGG00000004184	yrdc	87	58.150	ENSOCUG00000005384	YRDC	77	58.150	Oryctolagus_cuniculus
ENSPMGG00000004184	yrdc	93	74.793	ENSORLG00000014393	yrdc	99	69.888	Oryzias_latipes
ENSPMGG00000004184	yrdc	94	75.104	ENSORLG00020019663	yrdc	99	70.412	Oryzias_latipes_hni
ENSPMGG00000004184	yrdc	93	75.000	ENSORLG00015004625	yrdc	99	70.037	Oryzias_latipes_hsok
ENSPMGG00000004184	yrdc	93	76.250	ENSOMEG00000018550	yrdc	99	71.805	Oryzias_melastigma
ENSPMGG00000004184	yrdc	86	59.735	ENSOGAG00000030474	YRDC	82	59.735	Otolemur_garnettii
ENSPMGG00000004184	yrdc	86	57.965	ENSOARG00000019873	YRDC	81	57.965	Ovis_aries
ENSPMGG00000004184	yrdc	53	67.376	ENSPPAG00000039722	-	95	67.376	Pan_paniscus
ENSPMGG00000004184	yrdc	86	57.080	ENSPPRG00000007752	YRDC	81	57.080	Panthera_pardus
ENSPMGG00000004184	yrdc	77	50.467	ENSPTIG00000019821	YRDC	91	50.467	Panthera_tigris_altaica
ENSPMGG00000004184	yrdc	86	57.965	ENSPTRG00000000557	YRDC	81	57.965	Pan_troglodytes
ENSPMGG00000004184	yrdc	86	56.195	ENSPANG00000006487	YRDC	61	57.522	Papio_anubis
ENSPMGG00000004184	yrdc	92	69.874	ENSPKIG00000004574	yrdc	87	69.874	Paramormyrops_kingsleyae
ENSPMGG00000004184	yrdc	79	62.319	ENSPSIG00000006483	YRDC	73	62.319	Pelodiscus_sinensis
ENSPMGG00000004184	yrdc	65	62.791	ENSPEMG00000016985	Yrdc	75	62.791	Peromyscus_maniculatus_bairdii
ENSPMGG00000004184	yrdc	69	54.945	ENSPMAG00000002905	yrdc	98	54.945	Petromyzon_marinus
ENSPMGG00000004184	yrdc	81	60.377	ENSPCIG00000025731	YRDC	75	60.377	Phascolarctos_cinereus
ENSPMGG00000004184	yrdc	95	75.820	ENSPFOG00000023097	yrdc	95	73.622	Poecilia_formosa
ENSPMGG00000004184	yrdc	95	75.410	ENSPLAG00000020882	yrdc	95	73.228	Poecilia_latipinna
ENSPMGG00000004184	yrdc	95	75.820	ENSPMEG00000013237	yrdc	95	73.622	Poecilia_mexicana
ENSPMGG00000004184	yrdc	95	75.410	ENSPREG00000005285	yrdc	95	73.228	Poecilia_reticulata
ENSPMGG00000004184	yrdc	78	61.765	ENSPPYG00000001523	-	84	61.765	Pongo_abelii
ENSPMGG00000004184	yrdc	86	57.965	ENSPCAG00000016850	YRDC	81	57.965	Procavia_capensis
ENSPMGG00000004184	yrdc	86	58.850	ENSPCOG00000013214	YRDC	81	58.850	Propithecus_coquereli
ENSPMGG00000004184	yrdc	78	61.765	ENSPVAG00000010147	YRDC	73	61.765	Pteropus_vampyrus
ENSPMGG00000004184	yrdc	94	79.339	ENSPNYG00000013956	yrdc	93	77.689	Pundamilia_nyererei
ENSPMGG00000004184	yrdc	91	70.661	ENSPNAG00000015625	yrdc	99	70.661	Pygocentrus_nattereri
ENSPMGG00000004184	yrdc	78	61.765	ENSRNOG00000025424	Yrdc	73	61.765	Rattus_norvegicus
ENSPMGG00000004184	yrdc	86	56.195	ENSRBIG00000032289	YRDC	81	57.522	Rhinopithecus_bieti
ENSPMGG00000004184	yrdc	80	59.330	ENSRROG00000039370	YRDC	71	60.766	Rhinopithecus_roxellana
ENSPMGG00000004184	yrdc	75	62.437	ENSSBOG00000018937	YRDC	87	60.784	Saimiri_boliviensis_boliviensis
ENSPMGG00000004184	yrdc	56	69.128	ENSSHAG00000013957	-	99	69.128	Sarcophilus_harrisii
ENSPMGG00000004184	yrdc	81	70.283	ENSSFOG00015006128	yrdc	91	70.283	Scleropages_formosus
ENSPMGG00000004184	yrdc	92	80.508	ENSSMAG00000005195	yrdc	98	76.357	Scophthalmus_maximus
ENSPMGG00000004184	yrdc	52	34.559	ENSSDUG00000006631	-	66	34.559	Seriola_dumerili
ENSPMGG00000004184	yrdc	54	36.170	ENSSDUG00000006736	-	75	36.054	Seriola_dumerili
ENSPMGG00000004184	yrdc	95	78.279	ENSSDUG00000009775	yrdc	98	74.427	Seriola_dumerili
ENSPMGG00000004184	yrdc	52	34.559	ENSSLDG00000008694	-	65	34.559	Seriola_lalandi_dorsalis
ENSPMGG00000004184	yrdc	95	78.279	ENSSLDG00000003196	yrdc	98	74.427	Seriola_lalandi_dorsalis
ENSPMGG00000004184	yrdc	87	63.158	ENSSPUG00000003946	YRDC	86	63.158	Sphenodon_punctatus
ENSPMGG00000004184	yrdc	92	79.237	ENSSPAG00000012559	yrdc	95	75.197	Stegastes_partitus
ENSPMGG00000004184	yrdc	86	58.407	ENSSSCG00000040425	YRDC	81	58.407	Sus_scrofa
ENSPMGG00000004184	yrdc	54	69.014	ENSTGUG00000001507	YRDC	97	69.014	Taeniopygia_guttata
ENSPMGG00000004184	yrdc	95	70.683	ENSTRUG00000005923	yrdc	97	69.434	Takifugu_rubripes
ENSPMGG00000004184	yrdc	59	63.871	ENSTBEG00000008863	YRDC	99	63.871	Tupaia_belangeri
ENSPMGG00000004184	yrdc	53	68.085	ENSTTRG00000013538	-	95	68.085	Tursiops_truncatus
ENSPMGG00000004184	yrdc	76	63.317	ENSUAMG00000006150	YRDC	98	63.317	Ursus_americanus
ENSPMGG00000004184	yrdc	82	46.759	ENSVPAG00000006642	YRDC	93	46.759	Vicugna_pacos
ENSPMGG00000004184	yrdc	84	59.829	ENSXETG00000014420	yrdc	98	59.829	Xenopus_tropicalis
ENSPMGG00000004184	yrdc	91	74.468	ENSXCOG00000000829	yrdc	98	74.468	Xiphophorus_couchianus
ENSPMGG00000004184	yrdc	95	73.361	ENSXMAG00000014606	yrdc	96	68.864	Xiphophorus_maculatus