EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMGG00000004246 (Gene tree)
Gene ID: -
Gene Symbol: sbds
Alias: -
Full Name: SBDS%2C ribosome maturation factor
Gene Type: protein_coding
Species: Periophthalmus_magnuspinnatus
Status: putative
Strand: Plus strand
Length: 1260 bases
Position: chrKN461928.1:248704-249963
Accession: ZDB-GENE-040426-1116
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMGP00000005034	SBDS	PF01172.18	3.4e-34	1	1
ENSPMGP00000005034	SBDS_C	PF09377.10	1.6e-40	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMGT00000005341	-	750	-	ENSPMGP00000005034	249 (aa)	-	-

Gene Model

Click here to download ENSPMGG00000004246's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMGG00000004246's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMGG00000004246	sbds	100	81.928	ENSG00000126524	SBDS	97	89.157	Homo_sapiens
ENSPMGG00000004246	sbds	100	97.189	ENSAPOG00000014285	sbds	100	97.189	Acanthochromis_polyacanthus
ENSPMGG00000004246	sbds	100	81.928	ENSAMEG00000018167	SBDS	99	81.928	Ailuropoda_melanoleuca
ENSPMGG00000004246	sbds	100	96.032	ENSACIG00000007308	sbds	100	96.032	Amphilophus_citrinellus
ENSPMGG00000004246	sbds	100	97.189	ENSAOCG00000016770	sbds	100	97.189	Amphiprion_ocellaris
ENSPMGG00000004246	sbds	100	97.590	ENSAPEG00000015897	sbds	100	97.590	Amphiprion_percula
ENSPMGG00000004246	sbds	100	96.787	ENSATEG00000006901	sbds	100	96.787	Anabas_testudineus
ENSPMGG00000004246	sbds	93	75.325	ENSANAG00000024342	-	95	79.518	Aotus_nancymaae
ENSPMGG00000004246	sbds	83	80.583	ENSANAG00000037501	-	99	80.583	Aotus_nancymaae
ENSPMGG00000004246	sbds	100	97.189	ENSACLG00000018750	sbds	100	97.189	Astatotilapia_calliptera
ENSPMGG00000004246	sbds	100	89.157	ENSAMXG00000005361	sbds	99	89.157	Astyanax_mexicanus
ENSPMGG00000004246	sbds	100	81.928	ENSBTAG00000004051	SBDS	99	81.928	Bos_taurus
ENSPMGG00000004246	sbds	98	58.537	WBGene00021063	sbds-1	97	58.537	Caenorhabditis_elegans
ENSPMGG00000004246	sbds	100	81.928	ENSCJAG00000041007	SBDS	99	81.928	Callithrix_jacchus
ENSPMGG00000004246	sbds	100	80.080	ENSCAFG00000010797	SBDS	99	80.080	Canis_familiaris
ENSPMGG00000004246	sbds	100	81.928	ENSCAFG00020005357	SBDS	99	81.928	Canis_lupus_dingo
ENSPMGG00000004246	sbds	100	81.928	ENSCHIG00000026854	SBDS	99	81.928	Capra_hircus
ENSPMGG00000004246	sbds	100	81.928	ENSTSYG00000033822	SBDS	99	81.928	Carlito_syrichta
ENSPMGG00000004246	sbds	65	79.141	ENSCAPG00000006634	SBDS	99	79.141	Cavia_aperea
ENSPMGG00000004246	sbds	100	82.731	ENSCPOG00000036143	SBDS	99	82.731	Cavia_porcellus
ENSPMGG00000004246	sbds	100	81.928	ENSCCAG00000020671	SBDS	93	89.157	Cebus_capucinus
ENSPMGG00000004246	sbds	100	81.928	ENSCATG00000039026	SBDS	99	81.928	Cercocebus_atys
ENSPMGG00000004246	sbds	100	83.133	ENSCLAG00000005721	-	99	83.133	Chinchilla_lanigera
ENSPMGG00000004246	sbds	99	58.871	ENSCLAG00000002113	-	99	58.871	Chinchilla_lanigera
ENSPMGG00000004246	sbds	100	81.928	ENSCSAG00000018275	SBDS	99	81.928	Chlorocebus_sabaeus
ENSPMGG00000004246	sbds	100	77.510	ENSCHOG00000003795	SBDS	99	77.510	Choloepus_hoffmanni
ENSPMGG00000004246	sbds	100	84.739	ENSCPBG00000014893	SBDS	99	84.739	Chrysemys_picta_bellii
ENSPMGG00000004246	sbds	99	67.339	ENSCSAVG00000011811	-	99	67.339	Ciona_savignyi
ENSPMGG00000004246	sbds	100	81.526	ENSCANG00000032368	SBDS	99	81.526	Colobus_angolensis_palliatus
ENSPMGG00000004246	sbds	65	79.141	ENSCGRG00001019886	Sbds	99	79.141	Cricetulus_griseus_chok1gshd
ENSPMGG00000004246	sbds	83	81.553	ENSCGRG00000009211	Sbds	99	81.553	Cricetulus_griseus_crigri
ENSPMGG00000004246	sbds	100	95.181	ENSCSEG00000005798	sbds	100	95.181	Cynoglossus_semilaevis
ENSPMGG00000004246	sbds	100	93.574	ENSCVAG00000001053	sbds	100	93.574	Cyprinodon_variegatus
ENSPMGG00000004246	sbds	100	87.952	ENSDARG00000027803	sbds	99	87.952	Danio_rerio
ENSPMGG00000004246	sbds	100	81.928	ENSDNOG00000041174	SBDS	99	81.928	Dasypus_novemcinctus
ENSPMGG00000004246	sbds	100	83.936	ENSDORG00000026218	Sbds	99	83.936	Dipodomys_ordii
ENSPMGG00000004246	sbds	91	63.158	FBgn0035714	CG8549	98	62.753	Drosophila_melanogaster
ENSPMGG00000004246	sbds	93	58.190	ENSEBUG00000015780	sbds	99	58.190	Eptatretus_burgeri
ENSPMGG00000004246	sbds	100	81.928	ENSEASG00005008821	SBDS	99	81.928	Equus_asinus_asinus
ENSPMGG00000004246	sbds	100	81.928	ENSECAG00000008202	SBDS	99	81.928	Equus_caballus
ENSPMGG00000004246	sbds	84	62.500	ENSEEUG00000004768	SBDS	100	62.500	Erinaceus_europaeus
ENSPMGG00000004246	sbds	100	90.763	ENSELUG00000008382	sbds	99	90.763	Esox_lucius
ENSPMGG00000004246	sbds	100	81.928	ENSFCAG00000022142	SBDS	99	81.928	Felis_catus
ENSPMGG00000004246	sbds	100	86.345	ENSFALG00000013808	SBDS	99	86.345	Ficedula_albicollis
ENSPMGG00000004246	sbds	100	82.731	ENSFDAG00000018947	-	99	82.731	Fukomys_damarensis
ENSPMGG00000004246	sbds	100	91.165	ENSFHEG00000000708	sbds	100	91.165	Fundulus_heteroclitus
ENSPMGG00000004246	sbds	100	90.361	ENSGMOG00000018356	sbds	99	90.361	Gadus_morhua
ENSPMGG00000004246	sbds	100	83.133	ENSGALG00000027989	SBDS	99	83.133	Gallus_gallus
ENSPMGG00000004246	sbds	92	92.174	ENSGAFG00000014204	sbds	100	92.174	Gambusia_affinis
ENSPMGG00000004246	sbds	100	91.566	ENSGACG00000012697	sbds	100	91.566	Gasterosteus_aculeatus
ENSPMGG00000004246	sbds	86	84.977	ENSGAGG00000022402	SBDS	99	84.977	Gopherus_agassizii
ENSPMGG00000004246	sbds	96	63.333	ENSGGOG00000040023	-	92	63.333	Gorilla_gorilla
ENSPMGG00000004246	sbds	100	97.189	ENSHBUG00000002660	sbds	100	97.189	Haplochromis_burtoni
ENSPMGG00000004246	sbds	100	81.124	ENSHGLG00000009671	SBDS	99	81.124	Heterocephalus_glaber_female
ENSPMGG00000004246	sbds	100	81.124	ENSHGLG00100011332	SBDS	99	81.124	Heterocephalus_glaber_male
ENSPMGG00000004246	sbds	100	90.763	ENSHCOG00000018606	sbds	100	90.763	Hippocampus_comes
ENSPMGG00000004246	sbds	100	88.755	ENSIPUG00000006536	sbds	99	88.755	Ictalurus_punctatus
ENSPMGG00000004246	sbds	100	59.524	ENSJJAG00000003934	-	99	60.800	Jaculus_jaculus
ENSPMGG00000004246	sbds	99	80.567	ENSJJAG00000012033	-	99	80.567	Jaculus_jaculus
ENSPMGG00000004246	sbds	100	95.181	ENSKMAG00000018542	sbds	100	95.181	Kryptolebias_marmoratus
ENSPMGG00000004246	sbds	100	93.574	ENSLBEG00000016687	sbds	100	93.574	Labrus_bergylta
ENSPMGG00000004246	sbds	100	73.123	ENSLACG00000018916	SBDS	99	73.123	Latimeria_chalumnae
ENSPMGG00000004246	sbds	100	89.157	ENSLOCG00000004073	sbds	99	89.157	Lepisosteus_oculatus
ENSPMGG00000004246	sbds	100	82.329	ENSLAFG00000008763	SBDS	99	82.329	Loxodonta_africana
ENSPMGG00000004246	sbds	100	81.928	ENSMFAG00000032620	SBDS	99	81.928	Macaca_fascicularis
ENSPMGG00000004246	sbds	100	81.928	ENSMMUG00000045653	SBDS	99	81.928	Macaca_mulatta
ENSPMGG00000004246	sbds	100	81.928	ENSMNEG00000031523	SBDS	99	81.928	Macaca_nemestrina
ENSPMGG00000004246	sbds	100	65.613	ENSMLEG00000036826	SBDS	99	65.613	Mandrillus_leucophaeus
ENSPMGG00000004246	sbds	100	97.189	ENSMAMG00000016062	sbds	100	97.189	Mastacembelus_armatus
ENSPMGG00000004246	sbds	100	97.189	ENSMZEG00005024385	sbds	100	97.189	Maylandia_zebra
ENSPMGG00000004246	sbds	100	83.133	ENSMGAG00000002119	SBDS	99	83.133	Meleagris_gallopavo
ENSPMGG00000004246	sbds	100	67.871	ENSMAUG00000022214	-	100	67.871	Mesocricetus_auratus
ENSPMGG00000004246	sbds	100	81.928	ENSMICG00000014366	SBDS	99	81.928	Microcebus_murinus
ENSPMGG00000004246	sbds	100	82.329	ENSMOCG00000011739	Sbds	99	82.329	Microtus_ochrogaster
ENSPMGG00000004246	sbds	100	85.200	ENSMMOG00000005061	sbds	100	85.600	Mola_mola
ENSPMGG00000004246	sbds	100	83.133	ENSMODG00000006644	SBDS	99	83.133	Monodelphis_domestica
ENSPMGG00000004246	sbds	100	91.566	ENSMALG00000010219	sbds	100	91.566	Monopterus_albus
ENSPMGG00000004246	sbds	100	83.133	MGP_CAROLIEiJ_G0027800	Sbds	98	92.857	Mus_caroli
ENSPMGG00000004246	sbds	100	83.534	ENSMUSG00000025337	Sbds	98	92.857	Mus_musculus
ENSPMGG00000004246	sbds	100	83.133	MGP_PahariEiJ_G0024384	Sbds	98	92.857	Mus_pahari
ENSPMGG00000004246	sbds	100	83.534	MGP_SPRETEiJ_G0028798	Sbds	98	92.857	Mus_spretus
ENSPMGG00000004246	sbds	67	82.036	ENSMPUG00000016192	SBDS	96	82.036	Mustela_putorius_furo
ENSPMGG00000004246	sbds	73	76.796	ENSMLUG00000013575	SBDS	99	76.796	Myotis_lucifugus
ENSPMGG00000004246	sbds	100	83.133	ENSNGAG00000012093	Sbds	99	83.133	Nannospalax_galili
ENSPMGG00000004246	sbds	100	97.189	ENSNBRG00000017027	sbds	100	97.189	Neolamprologus_brichardi
ENSPMGG00000004246	sbds	100	81.928	ENSNLEG00000013288	SBDS	99	81.928	Nomascus_leucogenys
ENSPMGG00000004246	sbds	100	83.133	ENSOPRG00000008721	SBDS	99	83.133	Ochotona_princeps
ENSPMGG00000004246	sbds	100	64.659	ENSODEG00000000137	-	84	65.060	Octodon_degus
ENSPMGG00000004246	sbds	100	65.060	ENSODEG00000001116	-	99	65.060	Octodon_degus
ENSPMGG00000004246	sbds	100	74.297	ENSODEG00000019253	-	84	74.297	Octodon_degus
ENSPMGG00000004246	sbds	100	97.189	ENSONIG00000005874	sbds	100	97.189	Oreochromis_niloticus
ENSPMGG00000004246	sbds	83	81.068	ENSOANG00000007674	-	99	81.863	Ornithorhynchus_anatinus
ENSPMGG00000004246	sbds	100	83.936	ENSOCUG00000003170	SBDS	99	83.936	Oryctolagus_cuniculus
ENSPMGG00000004246	sbds	100	91.165	ENSORLG00000023489	sbds	100	91.165	Oryzias_latipes
ENSPMGG00000004246	sbds	100	91.566	ENSORLG00020019282	sbds	100	91.566	Oryzias_latipes_hni
ENSPMGG00000004246	sbds	100	91.566	ENSORLG00015008005	sbds	100	91.566	Oryzias_latipes_hsok
ENSPMGG00000004246	sbds	100	92.771	ENSOMEG00000022747	sbds	100	92.771	Oryzias_melastigma
ENSPMGG00000004246	sbds	100	82.329	ENSOGAG00000009011	-	99	82.329	Otolemur_garnettii
ENSPMGG00000004246	sbds	100	70.281	ENSOGAG00000015036	-	99	70.281	Otolemur_garnettii
ENSPMGG00000004246	sbds	100	81.928	ENSOARG00000010609	SBDS	99	81.928	Ovis_aries
ENSPMGG00000004246	sbds	100	81.124	ENSPPAG00000043889	-	99	81.124	Pan_paniscus
ENSPMGG00000004246	sbds	100	81.928	ENSPPRG00000002307	SBDS	99	81.928	Panthera_pardus
ENSPMGG00000004246	sbds	100	81.928	ENSPTIG00000021308	SBDS	99	81.928	Panthera_tigris_altaica
ENSPMGG00000004246	sbds	100	81.928	ENSPTRG00000019254	SBDS	99	81.928	Pan_troglodytes
ENSPMGG00000004246	sbds	100	68.273	ENSPTRG00000050835	-	99	68.273	Pan_troglodytes
ENSPMGG00000004246	sbds	84	82.297	ENSPTRG00000048174	-	93	82.297	Pan_troglodytes
ENSPMGG00000004246	sbds	100	68.273	ENSPTRG00000047744	-	99	68.273	Pan_troglodytes
ENSPMGG00000004246	sbds	100	81.928	ENSPANG00000004078	SBDS	99	81.928	Papio_anubis
ENSPMGG00000004246	sbds	100	91.566	ENSPKIG00000006489	sbds	99	91.566	Paramormyrops_kingsleyae
ENSPMGG00000004246	sbds	83	82.609	ENSPSIG00000014603	SBDS	99	82.609	Pelodiscus_sinensis
ENSPMGG00000004246	sbds	100	83.133	ENSPEMG00000008728	Sbds	99	83.133	Peromyscus_maniculatus_bairdii
ENSPMGG00000004246	sbds	100	83.534	ENSPCIG00000029718	SBDS	99	83.534	Phascolarctos_cinereus
ENSPMGG00000004246	sbds	100	93.574	ENSPFOG00000015837	sbds	100	93.574	Poecilia_formosa
ENSPMGG00000004246	sbds	100	93.976	ENSPLAG00000003641	sbds	100	93.976	Poecilia_latipinna
ENSPMGG00000004246	sbds	100	93.574	ENSPMEG00000019483	sbds	100	93.574	Poecilia_mexicana
ENSPMGG00000004246	sbds	100	93.976	ENSPREG00000018758	sbds	100	93.976	Poecilia_reticulata
ENSPMGG00000004246	sbds	100	81.928	ENSPPYG00000017513	SBDS	99	81.928	Pongo_abelii
ENSPMGG00000004246	sbds	100	81.526	ENSPCOG00000021098	SBDS	99	81.526	Propithecus_coquereli
ENSPMGG00000004246	sbds	100	82.329	ENSPVAG00000009369	SBDS	99	82.329	Pteropus_vampyrus
ENSPMGG00000004246	sbds	100	96.787	ENSPNYG00000022403	sbds	100	96.787	Pundamilia_nyererei
ENSPMGG00000004246	sbds	100	91.968	ENSPNAG00000001120	sbds	99	91.968	Pygocentrus_nattereri
ENSPMGG00000004246	sbds	100	83.133	ENSRNOG00000000888	Sbds	99	83.133	Rattus_norvegicus
ENSPMGG00000004246	sbds	100	81.928	ENSRBIG00000035557	SBDS	99	81.928	Rhinopithecus_bieti
ENSPMGG00000004246	sbds	100	67.470	ENSRROG00000041986	-	99	67.470	Rhinopithecus_roxellana
ENSPMGG00000004246	sbds	100	81.928	ENSRROG00000040842	-	99	81.928	Rhinopithecus_roxellana
ENSPMGG00000004246	sbds	96	43.902	YLR022C	-	96	43.902	Saccharomyces_cerevisiae
ENSPMGG00000004246	sbds	93	80.087	ENSSBOG00000022460	SBDS	99	80.087	Saimiri_boliviensis_boliviensis
ENSPMGG00000004246	sbds	100	71.486	ENSSHAG00000010263	SBDS	99	71.486	Sarcophilus_harrisii
ENSPMGG00000004246	sbds	100	91.566	ENSSFOG00015001108	sbds	99	91.566	Scleropages_formosus
ENSPMGG00000004246	sbds	100	95.582	ENSSMAG00000020506	sbds	100	95.582	Scophthalmus_maximus
ENSPMGG00000004246	sbds	100	95.984	ENSSDUG00000001528	sbds	100	95.984	Seriola_dumerili
ENSPMGG00000004246	sbds	100	95.582	ENSSLDG00000003659	sbds	100	95.582	Seriola_lalandi_dorsalis
ENSPMGG00000004246	sbds	61	88.235	ENSSARG00000013132	-	100	88.235	Sorex_araneus
ENSPMGG00000004246	sbds	73	90.698	ENSSARG00000001899	-	73	90.698	Sorex_araneus
ENSPMGG00000004246	sbds	100	83.133	ENSSPUG00000002699	SBDS	99	83.133	Sphenodon_punctatus
ENSPMGG00000004246	sbds	100	97.590	ENSSPAG00000016419	sbds	100	89.600	Stegastes_partitus
ENSPMGG00000004246	sbds	100	81.928	ENSSSCG00000007732	SBDS	99	81.928	Sus_scrofa
ENSPMGG00000004246	sbds	66	84.756	ENSTGUG00000003426	SBDS	99	84.756	Taeniopygia_guttata
ENSPMGG00000004246	sbds	100	95.582	ENSTRUG00000021443	sbds	100	95.582	Takifugu_rubripes
ENSPMGG00000004246	sbds	100	95.582	ENSTNIG00000019000	sbds	100	95.582	Tetraodon_nigroviridis
ENSPMGG00000004246	sbds	84	70.192	ENSTBEG00000001178	SBDS	100	70.192	Tupaia_belangeri
ENSPMGG00000004246	sbds	100	64.257	ENSTTRG00000003921	SBDS	99	64.257	Tursiops_truncatus
ENSPMGG00000004246	sbds	100	81.928	ENSUAMG00000001326	SBDS	99	81.928	Ursus_americanus
ENSPMGG00000004246	sbds	100	81.928	ENSUMAG00000015353	SBDS	99	81.928	Ursus_maritimus
ENSPMGG00000004246	sbds	100	81.928	ENSVVUG00000016478	SBDS	99	81.928	Vulpes_vulpes
ENSPMGG00000004246	sbds	100	84.739	ENSXETG00000010093	sbds	99	84.739	Xenopus_tropicalis
ENSPMGG00000004246	sbds	100	82.731	ENSXCOG00000010639	sbds	100	82.731	Xiphophorus_couchianus
ENSPMGG00000004246	sbds	100	93.976	ENSXMAG00000006065	sbds	100	93.976	Xiphophorus_maculatus