EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMGG00000004275 (Gene tree)
Gene ID: -
Gene Symbol: cth1
Alias: -
Full Name: cysteine three histidine 1
Gene Type: protein_coding
Species: Periophthalmus_magnuspinnatus
Status: putative
Strand: Minus strand
Length: 969 bases
Position: chrKN467062.1:17379-18347
Accession: ZDB-GENE-990806-20
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMGP00000005069	zf-CCCH	PF00642.24	1.3e-28	1	4
ENSPMGP00000005069	zf-CCCH	PF00642.24	1.3e-28	2	4
ENSPMGP00000005069	zf-CCCH	PF00642.24	1.3e-28	3	4
ENSPMGP00000005069	zf-CCCH	PF00642.24	1.3e-28	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMGT00000005376	-	969	-	ENSPMGP00000005069	322 (aa)	-	-

Gene Model

Click here to download ENSPMGG00000004275's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMGG00000004275's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMGG00000004275	cth1	91	67.687	ENSAPOG00000012552	cth1	95	69.360	Acanthochromis_polyacanthus
ENSPMGG00000004275	cth1	89	62.847	ENSACIG00000016026	cth1	99	62.270	Amphilophus_citrinellus
ENSPMGG00000004275	cth1	100	71.517	ENSAOCG00000001644	cth1	99	72.393	Amphiprion_ocellaris
ENSPMGG00000004275	cth1	100	71.517	ENSAPEG00000008930	cth1	99	72.393	Amphiprion_percula
ENSPMGG00000004275	cth1	99	74.618	ENSATEG00000002281	cth1	96	73.394	Anabas_testudineus
ENSPMGG00000004275	cth1	91	58.362	ENSACLG00000015353	cth1	95	59.727	Astatotilapia_calliptera
ENSPMGG00000004275	cth1	96	56.698	ENSAMXG00000025717	cth1	91	54.747	Astyanax_mexicanus
ENSPMGG00000004275	cth1	100	68.308	ENSCSEG00000014617	cth1	99	71.254	Cynoglossus_semilaevis
ENSPMGG00000004275	cth1	100	57.407	ENSCVAG00000001680	cth1	65	58.333	Cyprinodon_variegatus
ENSPMGG00000004275	cth1	91	55.960	ENSDARG00000057328	cth1	89	55.975	Danio_rerio
ENSPMGG00000004275	cth1	99	57.101	ENSELUG00000012738	cth1	68	62.447	Esox_lucius
ENSPMGG00000004275	cth1	99	61.682	ENSFHEG00000022665	cth1	98	59.502	Fundulus_heteroclitus
ENSPMGG00000004275	cth1	100	63.830	ENSGMOG00000007360	cth1	99	62.614	Gadus_morhua
ENSPMGG00000004275	cth1	100	60.000	ENSGAFG00000019288	cth1	99	60.494	Gambusia_affinis
ENSPMGG00000004275	cth1	100	65.635	ENSGACG00000000802	cth1	99	64.396	Gasterosteus_aculeatus
ENSPMGG00000004275	cth1	100	60.248	ENSHBUG00000014400	cth1	99	61.491	Haplochromis_burtoni
ENSPMGG00000004275	cth1	99	51.242	ENSHCOG00000010276	cth1	98	50.311	Hippocampus_comes
ENSPMGG00000004275	cth1	96	56.707	ENSIPUG00000018040	cth1	89	57.426	Ictalurus_punctatus
ENSPMGG00000004275	cth1	100	63.777	ENSKMAG00000005944	cth1	99	61.261	Kryptolebias_marmoratus
ENSPMGG00000004275	cth1	100	74.847	ENSLBEG00000019253	cth1	99	74.923	Labrus_bergylta
ENSPMGG00000004275	cth1	67	49.315	ENSLOCG00000002047	cth1	96	49.315	Lepisosteus_oculatus
ENSPMGG00000004275	cth1	99	60.267	ENSMAMG00000001525	cth1	63	69.456	Mastacembelus_armatus
ENSPMGG00000004275	cth1	100	60.248	ENSMZEG00005022335	cth1	99	61.491	Maylandia_zebra
ENSPMGG00000004275	cth1	96	71.521	ENSMMOG00000020518	cth1	100	71.521	Mola_mola
ENSPMGG00000004275	cth1	100	59.786	ENSMALG00000020738	cth1	60	67.811	Monopterus_albus
ENSPMGG00000004275	cth1	90	58.131	ENSNBRG00000022789	cth1	88	59.516	Neolamprologus_brichardi
ENSPMGG00000004275	cth1	100	61.728	ENSONIG00000021318	cth1	99	62.654	Oreochromis_niloticus
ENSPMGG00000004275	cth1	96	57.878	ENSORLG00000022847	cth1	99	56.667	Oryzias_latipes
ENSPMGG00000004275	cth1	96	59.105	ENSORLG00020011979	cth1	99	57.055	Oryzias_latipes_hni
ENSPMGG00000004275	cth1	96	58.842	ENSORLG00015013084	cth1	99	56.970	Oryzias_latipes_hsok
ENSPMGG00000004275	cth1	92	59.933	ENSOMEG00000005809	cth1	79	59.603	Oryzias_melastigma
ENSPMGG00000004275	cth1	94	51.829	ENSPKIG00000015883	cth1	66	53.814	Paramormyrops_kingsleyae
ENSPMGG00000004275	cth1	100	58.967	ENSPFOG00000013583	cth1	93	58.133	Poecilia_formosa
ENSPMGG00000004275	cth1	100	58.133	ENSPLAG00000018158	cth1	93	57.958	Poecilia_latipinna
ENSPMGG00000004275	cth1	100	58.133	ENSPMEG00000005744	cth1	99	58.434	Poecilia_mexicana
ENSPMGG00000004275	cth1	100	60.185	ENSPREG00000004099	cth1	99	59.878	Poecilia_reticulata
ENSPMGG00000004275	cth1	92	57.432	ENSPNYG00000016705	cth1	85	58.545	Pundamilia_nyererei
ENSPMGG00000004275	cth1	87	56.291	ENSPNAG00000013147	cth1	59	64.390	Pygocentrus_nattereri
ENSPMGG00000004275	cth1	93	50.000	ENSSFOG00015017190	cth1	69	54.978	Scleropages_formosus
ENSPMGG00000004275	cth1	100	75.309	ENSSMAG00000007977	cth1	99	75.309	Scophthalmus_maximus
ENSPMGG00000004275	cth1	100	73.333	ENSSDUG00000004321	cth1	99	73.939	Seriola_dumerili
ENSPMGG00000004275	cth1	99	72.727	ENSSLDG00000010023	-	99	73.636	Seriola_lalandi_dorsalis
ENSPMGG00000004275	cth1	100	72.508	ENSSLDG00000004516	-	99	73.414	Seriola_lalandi_dorsalis
ENSPMGG00000004275	cth1	100	72.508	ENSSLDG00000012760	cth1	99	73.414	Seriola_lalandi_dorsalis
ENSPMGG00000004275	cth1	99	72.360	ENSSPAG00000018659	cth1	99	71.605	Stegastes_partitus
ENSPMGG00000004275	cth1	100	63.272	ENSTRUG00000012770	cth1	99	63.272	Takifugu_rubripes
ENSPMGG00000004275	cth1	100	61.515	ENSTNIG00000000740	cth1	99	61.111	Tetraodon_nigroviridis
ENSPMGG00000004275	cth1	84	54.815	ENSXCOG00000003710	cth1	82	52.941	Xiphophorus_couchianus
ENSPMGG00000004275	cth1	100	61.538	ENSXMAG00000023885	cth1	99	59.327	Xiphophorus_maculatus