EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMGG00000004330 (Gene tree)
Gene ID: -
Gene Symbol: sf3b1
Alias: -
Full Name: splicing factor 3b%2C subunit 1
Gene Type: protein_coding
Species: Periophthalmus_magnuspinnatus
Status: putative
Strand: Plus strand
Length: 8751 bases
Position: chrKN468668.1:31923-40673
Accession: ZDB-GENE-040827-3
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMGP00000005155	SF3b1	PF08920.10	1e-47	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMGT00000005467	-	3597	-	ENSPMGP00000005155	1198 (aa)	-	-

Gene Model

Click here to download ENSPMGG00000004330's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMGG00000004330's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMGG00000004330	sf3b1	99	93.850	ENSG00000115524	SF3B1	90	94.019	Homo_sapiens
ENSPMGG00000004330	sf3b1	99	97.567	ENSAPOG00000011894	sf3b1	96	96.924	Acanthochromis_polyacanthus
ENSPMGG00000004330	sf3b1	98	93.723	ENSAMEG00000013809	SF3B1	90	93.893	Ailuropoda_melanoleuca
ENSPMGG00000004330	sf3b1	99	97.051	ENSACIG00000020910	sf3b1	88	97.051	Amphilophus_citrinellus
ENSPMGG00000004330	sf3b1	99	97.567	ENSAOCG00000004478	sf3b1	91	97.567	Amphiprion_ocellaris
ENSPMGG00000004330	sf3b1	99	97.567	ENSAPEG00000012937	sf3b1	91	97.567	Amphiprion_percula
ENSPMGG00000004330	sf3b1	99	97.649	ENSATEG00000020435	sf3b1	91	97.649	Anabas_testudineus
ENSPMGG00000004330	sf3b1	98	94.133	ENSAPLG00000003993	SF3B1	90	94.133	Anas_platyrhynchos
ENSPMGG00000004330	sf3b1	99	93.845	ENSACAG00000009612	SF3B1	90	93.845	Anolis_carolinensis
ENSPMGG00000004330	sf3b1	99	93.850	ENSANAG00000021577	SF3B1	89	95.761	Aotus_nancymaae
ENSPMGG00000004330	sf3b1	99	96.390	ENSACLG00000023470	sf3b1	91	96.390	Astatotilapia_calliptera
ENSPMGG00000004330	sf3b1	99	96.479	ENSAMXG00000002219	sf3b1	91	96.479	Astyanax_mexicanus
ENSPMGG00000004330	sf3b1	99	93.850	ENSBTAG00000008915	SF3B1	90	94.019	Bos_taurus
ENSPMGG00000004330	sf3b1	97	65.633	WBGene00011605	sftb-1	89	65.551	Caenorhabditis_elegans
ENSPMGG00000004330	sf3b1	99	93.850	ENSCJAG00000003902	SF3B1	90	94.019	Callithrix_jacchus
ENSPMGG00000004330	sf3b1	99	93.850	ENSCAFG00000010826	SF3B1	90	94.019	Canis_familiaris
ENSPMGG00000004330	sf3b1	99	93.850	ENSCAFG00020004750	SF3B1	90	94.019	Canis_lupus_dingo
ENSPMGG00000004330	sf3b1	99	93.850	ENSCHIG00000015226	SF3B1	90	94.019	Capra_hircus
ENSPMGG00000004330	sf3b1	99	93.766	ENSTSYG00000009214	SF3B1	90	93.934	Carlito_syrichta
ENSPMGG00000004330	sf3b1	98	93.660	ENSCAPG00000006547	SF3B1	90	93.829	Cavia_aperea
ENSPMGG00000004330	sf3b1	98	93.798	ENSCPOG00000009353	SF3B1	90	93.968	Cavia_porcellus
ENSPMGG00000004330	sf3b1	99	93.850	ENSCCAG00000020506	SF3B1	90	94.019	Cebus_capucinus
ENSPMGG00000004330	sf3b1	99	93.850	ENSCATG00000035735	SF3B1	90	94.019	Cercocebus_atys
ENSPMGG00000004330	sf3b1	98	93.803	ENSCLAG00000014767	SF3B1	90	93.973	Chinchilla_lanigera
ENSPMGG00000004330	sf3b1	99	93.850	ENSCSAG00000011505	SF3B1	90	94.019	Chlorocebus_sabaeus
ENSPMGG00000004330	sf3b1	79	92.702	ENSCHOG00000009860	SF3B1	72	92.702	Choloepus_hoffmanni
ENSPMGG00000004330	sf3b1	99	94.093	ENSCPBG00000021902	SF3B1	98	93.716	Chrysemys_picta_bellii
ENSPMGG00000004330	sf3b1	75	78.485	ENSCING00000002558	-	99	78.801	Ciona_intestinalis
ENSPMGG00000004330	sf3b1	99	80.149	ENSCSAVG00000002559	-	91	80.066	Ciona_savignyi
ENSPMGG00000004330	sf3b1	99	93.850	ENSCANG00000029415	SF3B1	90	94.019	Colobus_angolensis_palliatus
ENSPMGG00000004330	sf3b1	99	93.850	ENSCGRG00001016990	Sf3b1	90	94.019	Cricetulus_griseus_chok1gshd
ENSPMGG00000004330	sf3b1	99	93.850	ENSCGRG00000005301	Sf3b1	90	94.019	Cricetulus_griseus_crigri
ENSPMGG00000004330	sf3b1	99	93.597	ENSCSEG00000003860	sf3b1	90	93.597	Cynoglossus_semilaevis
ENSPMGG00000004330	sf3b1	99	97.397	ENSCVAG00000003680	sf3b1	94	97.397	Cyprinodon_variegatus
ENSPMGG00000004330	sf3b1	99	95.718	ENSDARG00000056138	sf3b1	91	95.718	Danio_rerio
ENSPMGG00000004330	sf3b1	99	93.771	ENSDNOG00000011754	SF3B1	90	93.939	Dasypus_novemcinctus
ENSPMGG00000004330	sf3b1	98	92.014	ENSDORG00000002399	Sf3b1	90	92.014	Dipodomys_ordii
ENSPMGG00000004330	sf3b1	99	76.125	FBgn0031266	Sf3b1	91	76.125	Drosophila_melanogaster
ENSPMGG00000004330	sf3b1	90	92.719	ENSETEG00000009188	SF3B1	100	92.903	Echinops_telfairi
ENSPMGG00000004330	sf3b1	98	86.537	ENSEBUG00000004325	sf3b1	89	89.622	Eptatretus_burgeri
ENSPMGG00000004330	sf3b1	99	93.850	ENSEASG00005020159	SF3B1	88	94.019	Equus_asinus_asinus
ENSPMGG00000004330	sf3b1	99	93.850	ENSECAG00000021657	SF3B1	88	94.019	Equus_caballus
ENSPMGG00000004330	sf3b1	91	99.712	ENSEEUG00000000836	SF3B1	77	99.712	Erinaceus_europaeus
ENSPMGG00000004330	sf3b1	99	95.583	ENSELUG00000005977	sf3b1	89	95.583	Esox_lucius
ENSPMGG00000004330	sf3b1	99	93.850	ENSFCAG00000005038	SF3B1	90	94.019	Felis_catus
ENSPMGG00000004330	sf3b1	98	94.133	ENSFALG00000004281	SF3B1	90	94.133	Ficedula_albicollis
ENSPMGG00000004330	sf3b1	99	93.850	ENSFDAG00000017510	SF3B1	90	94.019	Fukomys_damarensis
ENSPMGG00000004330	sf3b1	99	96.641	ENSFHEG00000014333	sf3b1	91	96.641	Fundulus_heteroclitus
ENSPMGG00000004330	sf3b1	99	96.134	ENSGMOG00000006773	sf3b1	91	96.134	Gadus_morhua
ENSPMGG00000004330	sf3b1	99	94.177	ENSGALG00000008038	SF3B1	90	94.177	Gallus_gallus
ENSPMGG00000004330	sf3b1	99	96.034	ENSGAFG00000000704	sf3b1	90	97.521	Gambusia_affinis
ENSPMGG00000004330	sf3b1	99	96.804	ENSGACG00000008839	sf3b1	91	96.804	Gasterosteus_aculeatus
ENSPMGG00000004330	sf3b1	99	93.384	ENSGAGG00000017478	SF3B1	91	93.384	Gopherus_agassizii
ENSPMGG00000004330	sf3b1	98	88.360	ENSGGOG00000009264	SF3B1	90	88.615	Gorilla_gorilla
ENSPMGG00000004330	sf3b1	99	96.390	ENSHBUG00000007705	sf3b1	91	96.390	Haplochromis_burtoni
ENSPMGG00000004330	sf3b1	98	93.803	ENSHGLG00000008285	-	90	93.973	Heterocephalus_glaber_female
ENSPMGG00000004330	sf3b1	98	93.548	ENSHGLG00100005535	-	91	93.718	Heterocephalus_glaber_male
ENSPMGG00000004330	sf3b1	99	96.578	ENSHCOG00000016775	sf3b1	91	96.578	Hippocampus_comes
ENSPMGG00000004330	sf3b1	99	96.477	ENSIPUG00000013171	sf3b1	91	96.477	Ictalurus_punctatus
ENSPMGG00000004330	sf3b1	99	93.850	ENSSTOG00000011034	SF3B1	90	94.019	Ictidomys_tridecemlineatus
ENSPMGG00000004330	sf3b1	98	93.777	ENSJJAG00000010903	Sf3b1	90	93.947	Jaculus_jaculus
ENSPMGG00000004330	sf3b1	99	96.653	ENSKMAG00000004009	sf3b1	91	96.653	Kryptolebias_marmoratus
ENSPMGG00000004330	sf3b1	99	97.468	ENSLBEG00000022208	sf3b1	91	97.468	Labrus_bergylta
ENSPMGG00000004330	sf3b1	98	90.472	ENSLACG00000014832	SF3B1	90	90.472	Latimeria_chalumnae
ENSPMGG00000004330	sf3b1	99	95.394	ENSLOCG00000003899	sf3b1	91	95.394	Lepisosteus_oculatus
ENSPMGG00000004330	sf3b1	99	93.850	ENSLAFG00000001956	SF3B1	90	94.019	Loxodonta_africana
ENSPMGG00000004330	sf3b1	98	93.803	ENSMMUG00000022430	SF3B1	89	93.973	Macaca_mulatta
ENSPMGG00000004330	sf3b1	99	93.850	ENSMNEG00000042333	SF3B1	89	95.761	Macaca_nemestrina
ENSPMGG00000004330	sf3b1	92	89.019	ENSMLEG00000026141	SF3B1	88	89.658	Mandrillus_leucophaeus
ENSPMGG00000004330	sf3b1	99	97.397	ENSMAMG00000010241	sf3b1	91	97.397	Mastacembelus_armatus
ENSPMGG00000004330	sf3b1	99	96.390	ENSMZEG00005021254	sf3b1	91	96.390	Maylandia_zebra
ENSPMGG00000004330	sf3b1	98	93.452	ENSMGAG00000007017	SF3B1	90	93.452	Meleagris_gallopavo
ENSPMGG00000004330	sf3b1	98	89.134	ENSMAUG00000009071	Sf3b1	89	89.304	Mesocricetus_auratus
ENSPMGG00000004330	sf3b1	99	93.850	ENSMICG00000013879	SF3B1	90	94.019	Microcebus_murinus
ENSPMGG00000004330	sf3b1	98	89.059	ENSMOCG00000000455	Sf3b1	90	89.059	Microtus_ochrogaster
ENSPMGG00000004330	sf3b1	91	97.441	ENSMMOG00000000475	sf3b1	100	97.441	Mola_mola
ENSPMGG00000004330	sf3b1	99	93.260	ENSMODG00000012275	SF3B1	90	93.429	Monodelphis_domestica
ENSPMGG00000004330	sf3b1	99	97.313	ENSMALG00000017211	sf3b1	91	97.313	Monopterus_albus
ENSPMGG00000004330	sf3b1	99	93.850	MGP_CAROLIEiJ_G0014141	Sf3b1	90	94.019	Mus_caroli
ENSPMGG00000004330	sf3b1	99	93.850	ENSMUSG00000025982	Sf3b1	90	94.019	Mus_musculus
ENSPMGG00000004330	sf3b1	99	93.850	MGP_SPRETEiJ_G0014947	Sf3b1	90	94.019	Mus_spretus
ENSPMGG00000004330	sf3b1	99	93.850	ENSMPUG00000007799	SF3B1	90	94.019	Mustela_putorius_furo
ENSPMGG00000004330	sf3b1	99	92.586	ENSMLUG00000000840	SF3B1	90	92.755	Myotis_lucifugus
ENSPMGG00000004330	sf3b1	99	93.491	ENSNGAG00000021884	-	90	93.660	Nannospalax_galili
ENSPMGG00000004330	sf3b1	99	91.604	ENSNBRG00000015816	sf3b1	90	91.751	Neolamprologus_brichardi
ENSPMGG00000004330	sf3b1	99	93.850	ENSNLEG00000006861	SF3B1	90	94.019	Nomascus_leucogenys
ENSPMGG00000004330	sf3b1	68	100.000	ENSMEUG00000015848	-	59	100.000	Notamacropus_eugenii
ENSPMGG00000004330	sf3b1	99	80.263	ENSOPRG00000008596	SF3B1	90	80.263	Ochotona_princeps
ENSPMGG00000004330	sf3b1	99	93.850	ENSODEG00000011153	-	90	94.019	Octodon_degus
ENSPMGG00000004330	sf3b1	99	96.390	ENSONIG00000013758	sf3b1	91	96.390	Oreochromis_niloticus
ENSPMGG00000004330	sf3b1	80	96.250	ENSOCUG00000012722	-	85	96.250	Oryctolagus_cuniculus
ENSPMGG00000004330	sf3b1	99	96.725	ENSORLG00000020219	sf3b1	91	96.725	Oryzias_latipes
ENSPMGG00000004330	sf3b1	99	96.725	ENSORLG00020001746	sf3b1	91	96.725	Oryzias_latipes_hni
ENSPMGG00000004330	sf3b1	70	95.709	ENSORLG00015001759	sf3b1	98	95.709	Oryzias_latipes_hsok
ENSPMGG00000004330	sf3b1	99	96.977	ENSOMEG00000019231	sf3b1	91	96.977	Oryzias_melastigma
ENSPMGG00000004330	sf3b1	53	73.791	ENSOGAG00000000267	-	100	73.947	Otolemur_garnettii
ENSPMGG00000004330	sf3b1	99	93.850	ENSOARG00000015374	SF3B1	90	94.019	Ovis_aries
ENSPMGG00000004330	sf3b1	99	93.850	ENSPPAG00000035007	SF3B1	90	94.019	Pan_paniscus
ENSPMGG00000004330	sf3b1	99	93.850	ENSPPRG00000009090	SF3B1	90	94.019	Panthera_pardus
ENSPMGG00000004330	sf3b1	99	93.850	ENSPTIG00000021557	SF3B1	90	94.019	Panthera_tigris_altaica
ENSPMGG00000004330	sf3b1	98	85.859	ENSPTRG00000012771	SF3B1	90	86.029	Pan_troglodytes
ENSPMGG00000004330	sf3b1	99	93.850	ENSPANG00000013417	SF3B1	90	94.019	Papio_anubis
ENSPMGG00000004330	sf3b1	99	96.218	ENSPKIG00000000784	sf3b1	91	96.218	Paramormyrops_kingsleyae
ENSPMGG00000004330	sf3b1	98	92.766	ENSPSIG00000017222	SF3B1	89	92.766	Pelodiscus_sinensis
ENSPMGG00000004330	sf3b1	98	93.803	ENSPEMG00000010699	Sf3b1	90	93.973	Peromyscus_maniculatus_bairdii
ENSPMGG00000004330	sf3b1	99	89.438	ENSPMAG00000001311	sf3b1	91	89.774	Petromyzon_marinus
ENSPMGG00000004330	sf3b1	99	93.345	ENSPCIG00000010642	SF3B1	90	93.513	Phascolarctos_cinereus
ENSPMGG00000004330	sf3b1	99	97.483	ENSPFOG00000000073	sf3b1	91	97.483	Poecilia_formosa
ENSPMGG00000004330	sf3b1	99	97.565	ENSPLAG00000002293	sf3b1	91	97.565	Poecilia_latipinna
ENSPMGG00000004330	sf3b1	99	97.565	ENSPMEG00000000446	sf3b1	89	97.565	Poecilia_mexicana
ENSPMGG00000004330	sf3b1	99	97.565	ENSPREG00000019652	sf3b1	91	97.565	Poecilia_reticulata
ENSPMGG00000004330	sf3b1	80	97.289	ENSPPYG00000013044	SF3B1	84	97.289	Pongo_abelii
ENSPMGG00000004330	sf3b1	99	93.682	ENSPCAG00000009292	SF3B1	90	93.850	Procavia_capensis
ENSPMGG00000004330	sf3b1	99	93.850	ENSPCOG00000024074	SF3B1	90	94.019	Propithecus_coquereli
ENSPMGG00000004330	sf3b1	99	93.850	ENSPVAG00000008302	SF3B1	90	94.019	Pteropus_vampyrus
ENSPMGG00000004330	sf3b1	99	96.306	ENSPNYG00000014939	sf3b1	91	96.306	Pundamilia_nyererei
ENSPMGG00000004330	sf3b1	99	96.060	ENSPNAG00000008288	sf3b1	91	96.060	Pygocentrus_nattereri
ENSPMGG00000004330	sf3b1	99	93.850	ENSRNOG00000013516	Sf3b1	90	94.019	Rattus_norvegicus
ENSPMGG00000004330	sf3b1	99	89.705	ENSRBIG00000026096	SF3B1	90	89.873	Rhinopithecus_bieti
ENSPMGG00000004330	sf3b1	99	93.850	ENSRROG00000031308	SF3B1	90	94.019	Rhinopithecus_roxellana
ENSPMGG00000004330	sf3b1	99	93.850	ENSSBOG00000020080	SF3B1	90	94.019	Saimiri_boliviensis_boliviensis
ENSPMGG00000004330	sf3b1	99	93.260	ENSSHAG00000017564	SF3B1	90	93.429	Sarcophilus_harrisii
ENSPMGG00000004330	sf3b1	99	95.973	ENSSFOG00015021535	sf3b1	91	95.973	Scleropages_formosus
ENSPMGG00000004330	sf3b1	99	97.076	ENSSMAG00000013977	sf3b1	90	97.076	Scophthalmus_maximus
ENSPMGG00000004330	sf3b1	99	97.397	ENSSDUG00000017422	sf3b1	91	97.397	Seriola_dumerili
ENSPMGG00000004330	sf3b1	99	97.313	ENSSLDG00000019495	sf3b1	91	97.313	Seriola_lalandi_dorsalis
ENSPMGG00000004330	sf3b1	71	99.775	ENSSARG00000007016	SF3B1	66	99.775	Sorex_araneus
ENSPMGG00000004330	sf3b1	99	93.755	ENSSPUG00000000410	SF3B1	90	93.755	Sphenodon_punctatus
ENSPMGG00000004330	sf3b1	99	97.313	ENSSPAG00000010451	sf3b1	89	97.313	Stegastes_partitus
ENSPMGG00000004330	sf3b1	99	93.317	ENSSSCG00000016075	SF3B1	100	93.580	Sus_scrofa
ENSPMGG00000004330	sf3b1	99	94.093	ENSTGUG00000010553	SF3B1	90	94.093	Taeniopygia_guttata
ENSPMGG00000004330	sf3b1	99	97.229	ENSTRUG00000015534	sf3b1	91	97.229	Takifugu_rubripes
ENSPMGG00000004330	sf3b1	92	97.080	ENSTBEG00000008714	SF3B1	92	97.080	Tupaia_belangeri
ENSPMGG00000004330	sf3b1	91	93.103	ENSTTRG00000003414	SF3B1	83	93.103	Tursiops_truncatus
ENSPMGG00000004330	sf3b1	92	84.262	ENSUAMG00000018506	SF3B1	96	98.649	Ursus_americanus
ENSPMGG00000004330	sf3b1	99	93.850	ENSUMAG00000020945	SF3B1	90	94.019	Ursus_maritimus
ENSPMGG00000004330	sf3b1	94	93.230	ENSVPAG00000005798	SF3B1	86	93.230	Vicugna_pacos
ENSPMGG00000004330	sf3b1	99	93.850	ENSVVUG00000025948	SF3B1	86	94.019	Vulpes_vulpes
ENSPMGG00000004330	sf3b1	99	91.912	ENSXETG00000013339	sf3b1	90	91.912	Xenopus_tropicalis
ENSPMGG00000004330	sf3b1	99	92.923	ENSXCOG00000018086	sf3b1	90	93.260	Xiphophorus_couchianus
ENSPMGG00000004330	sf3b1	99	97.481	ENSXMAG00000007369	sf3b1	92	97.481	Xiphophorus_maculatus