EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMGG00000005259 (Gene tree)
Gene ID: -
Gene Symbol: UPF2
Alias: -
Full Name: UPF2%2C regulator of nonsense mediated mRNA decay
Gene Type: protein_coding
Species: Periophthalmus_magnuspinnatus
Status: putative
Strand: Minus strand
Length: 7995 bases
Position: chrKN464377.1:136645-144639
Accession: 17854
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMGP00000006241	Upf2	PF04050.14	2.2e-32	1	1
ENSPMGP00000006241	MIF4G	PF02854.19	1.6e-72	1	2
ENSPMGP00000006241	MIF4G	PF02854.19	1.6e-72	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMGT00000006633	UPF2-201	3759	-	ENSPMGP00000006241	1252 (aa)	-	-

Gene Model

Click here to download ENSPMGG00000005259's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMGG00000005259's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMGG00000005259	UPF2	100	80.377	ENSG00000151461	UPF2	99	79.749	Homo_sapiens
ENSPMGG00000005259	UPF2	100	86.267	ENSAPOG00000015837	UPF2	100	85.478	Acanthochromis_polyacanthus
ENSPMGG00000005259	UPF2	100	81.697	ENSAMEG00000004586	UPF2	99	80.440	Ailuropoda_melanoleuca
ENSPMGG00000005259	UPF2	100	90.204	ENSACIG00000018078	UPF2	100	90.204	Amphilophus_citrinellus
ENSPMGG00000005259	UPF2	100	90.816	ENSAOCG00000016766	UPF2	99	90.816	Amphiprion_ocellaris
ENSPMGG00000005259	UPF2	100	90.895	ENSAPEG00000019084	UPF2	99	90.895	Amphiprion_percula
ENSPMGG00000005259	UPF2	100	89.890	ENSATEG00000021677	UPF2	99	89.890	Anabas_testudineus
ENSPMGG00000005259	UPF2	100	77.500	ENSAPLG00000010287	UPF2	90	82.771	Anas_platyrhynchos
ENSPMGG00000005259	UPF2	100	81.383	ENSACAG00000009259	UPF2	99	81.255	Anolis_carolinensis
ENSPMGG00000005259	UPF2	92	78.095	ENSANAG00000028451	UPF2	93	77.148	Aotus_nancymaae
ENSPMGG00000005259	UPF2	100	90.047	ENSACLG00000012696	UPF2	99	90.047	Astatotilapia_calliptera
ENSPMGG00000005259	UPF2	100	85.513	ENSAMXG00000013700	UPF2	99	85.200	Astyanax_mexicanus
ENSPMGG00000005259	UPF2	100	81.304	ENSBTAG00000000288	UPF2	99	80.361	Bos_taurus
ENSPMGG00000005259	UPF2	100	80.204	ENSCJAG00000020685	UPF2	99	78.633	Callithrix_jacchus
ENSPMGG00000005259	UPF2	100	81.304	ENSCAFG00000004839	UPF2	99	80.518	Canis_familiaris
ENSPMGG00000005259	UPF2	100	78.408	ENSCAFG00020005882	UPF2	98	80.731	Canis_lupus_dingo
ENSPMGG00000005259	UPF2	100	81.304	ENSCHIG00000020359	UPF2	99	80.361	Capra_hircus
ENSPMGG00000005259	UPF2	100	80.911	ENSTSYG00000000935	UPF2	97	83.696	Carlito_syrichta
ENSPMGG00000005259	UPF2	92	72.899	ENSCAPG00000016658	UPF2	95	72.051	Cavia_aperea
ENSPMGG00000005259	UPF2	92	81.304	ENSCPOG00000008809	UPF2	93	80.290	Cavia_porcellus
ENSPMGG00000005259	UPF2	100	73.998	ENSCCAG00000035991	UPF2	99	72.506	Cebus_capucinus
ENSPMGG00000005259	UPF2	100	80.534	ENSCATG00000032679	UPF2	99	79.749	Cercocebus_atys
ENSPMGG00000005259	UPF2	100	79.245	ENSCLAG00000011434	UPF2	99	78.616	Chinchilla_lanigera
ENSPMGG00000005259	UPF2	100	80.455	ENSCSAG00000013372	UPF2	99	79.670	Chlorocebus_sabaeus
ENSPMGG00000005259	UPF2	78	89.202	ENSCHOG00000000422	UPF2	78	90.686	Choloepus_hoffmanni
ENSPMGG00000005259	UPF2	100	80.094	ENSCPBG00000027823	UPF2	100	80.361	Chrysemys_picta_bellii
ENSPMGG00000005259	UPF2	79	48.917	ENSCSAVG00000007772	-	99	48.075	Ciona_savignyi
ENSPMGG00000005259	UPF2	100	75.545	ENSCANG00000040396	UPF2	100	74.766	Colobus_angolensis_palliatus
ENSPMGG00000005259	UPF2	100	80.503	ENSCGRG00001019347	Upf2	99	79.969	Cricetulus_griseus_chok1gshd
ENSPMGG00000005259	UPF2	100	80.503	ENSCGRG00000017993	Upf2	99	79.969	Cricetulus_griseus_crigri
ENSPMGG00000005259	UPF2	99	84.350	ENSCSEG00000003520	UPF2	99	84.029	Cynoglossus_semilaevis
ENSPMGG00000005259	UPF2	99	88.766	ENSCVAG00000006167	UPF2	100	88.687	Cyprinodon_variegatus
ENSPMGG00000005259	UPF2	100	81.068	ENSDNOG00000018160	UPF2	99	80.047	Dasypus_novemcinctus
ENSPMGG00000005259	UPF2	100	80.754	ENSDORG00000002478	Upf2	99	79.811	Dipodomys_ordii
ENSPMGG00000005259	UPF2	90	36.334	FBgn0029992	Upf2	95	36.154	Drosophila_melanogaster
ENSPMGG00000005259	UPF2	73	91.971	ENSETEG00000011583	-	63	91.971	Echinops_telfairi
ENSPMGG00000005259	UPF2	68	70.106	ENSEBUG00000012448	-	87	72.848	Eptatretus_burgeri
ENSPMGG00000005259	UPF2	100	80.031	ENSEASG00005019274	UPF2	99	79.167	Equus_asinus_asinus
ENSPMGG00000005259	UPF2	100	80.031	ENSECAG00000017022	UPF2	99	79.167	Equus_caballus
ENSPMGG00000005259	UPF2	82	75.080	ENSEEUG00000007819	UPF2	70	84.596	Erinaceus_europaeus
ENSPMGG00000005259	UPF2	100	84.676	ENSELUG00000012014	UPF2	99	85.150	Esox_lucius
ENSPMGG00000005259	UPF2	100	83.978	ENSFCAG00000005785	UPF2	99	81.068	Felis_catus
ENSPMGG00000005259	UPF2	100	81.270	ENSFALG00000001889	UPF2	98	81.113	Ficedula_albicollis
ENSPMGG00000005259	UPF2	100	79.324	ENSFDAG00000014348	UPF2	99	78.189	Fukomys_damarensis
ENSPMGG00000005259	UPF2	99	88.986	ENSFHEG00000009826	UPF2	99	88.986	Fundulus_heteroclitus
ENSPMGG00000005259	UPF2	91	86.828	ENSGMOG00000005557	UPF2	100	84.025	Gadus_morhua
ENSPMGG00000005259	UPF2	100	81.947	ENSGALG00000033772	UPF2	99	81.162	Gallus_gallus
ENSPMGG00000005259	UPF2	100	88.452	ENSGAFG00000020867	UPF2	99	88.688	Gambusia_affinis
ENSPMGG00000005259	UPF2	100	87.784	ENSGACG00000001080	UPF2	100	87.940	Gasterosteus_aculeatus
ENSPMGG00000005259	UPF2	100	81.461	ENSGAGG00000002700	UPF2	99	80.549	Gopherus_agassizii
ENSPMGG00000005259	UPF2	100	80.377	ENSGGOG00000001479	UPF2	99	79.749	Gorilla_gorilla
ENSPMGG00000005259	UPF2	100	90.204	ENSHBUG00000004249	UPF2	100	90.204	Haplochromis_burtoni
ENSPMGG00000005259	UPF2	100	79.245	ENSHGLG00000015176	-	99	78.538	Heterocephalus_glaber_female
ENSPMGG00000005259	UPF2	100	70.236	ENSHGLG00000003822	-	99	69.504	Heterocephalus_glaber_female
ENSPMGG00000005259	UPF2	100	76.965	ENSHGLG00100010036	UPF2	100	76.258	Heterocephalus_glaber_male
ENSPMGG00000005259	UPF2	100	87.069	ENSHCOG00000004025	UPF2	99	86.520	Hippocampus_comes
ENSPMGG00000005259	UPF2	100	84.910	ENSIPUG00000015524	UPF2	99	84.832	Ictalurus_punctatus
ENSPMGG00000005259	UPF2	100	81.304	ENSSTOG00000013075	UPF2	99	80.597	Ictidomys_tridecemlineatus
ENSPMGG00000005259	UPF2	100	77.394	ENSJJAG00000004913	Upf2	99	78.836	Jaculus_jaculus
ENSPMGG00000005259	UPF2	99	88.547	ENSKMAG00000001071	UPF2	99	88.468	Kryptolebias_marmoratus
ENSPMGG00000005259	UPF2	80	88.692	ENSLBEG00000000728	-	93	88.692	Labrus_bergylta
ENSPMGG00000005259	UPF2	100	90.439	ENSLBEG00000016394	-	99	90.439	Labrus_bergylta
ENSPMGG00000005259	UPF2	91	76.672	ENSLACG00000015945	UPF2	99	75.235	Latimeria_chalumnae
ENSPMGG00000005259	UPF2	99	84.834	ENSLOCG00000015698	UPF2	99	85.229	Lepisosteus_oculatus
ENSPMGG00000005259	UPF2	100	80.534	ENSMFAG00000043865	UPF2	99	79.749	Macaca_fascicularis
ENSPMGG00000005259	UPF2	100	80.534	ENSMMUG00000008241	UPF2	99	79.749	Macaca_mulatta
ENSPMGG00000005259	UPF2	80	80.966	ENSMNEG00000008062	UPF2	99	79.941	Macaca_nemestrina
ENSPMGG00000005259	UPF2	100	73.705	ENSMLEG00000036120	UPF2	100	77.551	Mandrillus_leucophaeus
ENSPMGG00000005259	UPF2	100	90.439	ENSMAMG00000018276	UPF2	99	89.577	Mastacembelus_armatus
ENSPMGG00000005259	UPF2	100	90.047	ENSMZEG00005021595	UPF2	99	90.047	Maylandia_zebra
ENSPMGG00000005259	UPF2	99	81.768	ENSMGAG00000004573	UPF2	99	81.560	Meleagris_gallopavo
ENSPMGG00000005259	UPF2	100	78.381	ENSMAUG00000016512	Upf2	99	77.848	Mesocricetus_auratus
ENSPMGG00000005259	UPF2	95	83.838	ENSMICG00000001716	UPF2	100	77.463	Microcebus_murinus
ENSPMGG00000005259	UPF2	100	79.150	ENSMOCG00000008263	Upf2	99	78.538	Microtus_ochrogaster
ENSPMGG00000005259	UPF2	100	87.737	ENSMMOG00000006528	UPF2	100	87.658	Mola_mola
ENSPMGG00000005259	UPF2	100	79.811	ENSMODG00000016794	UPF2	99	81.147	Monodelphis_domestica
ENSPMGG00000005259	UPF2	100	90.134	ENSMALG00000002663	UPF2	100	89.582	Monopterus_albus
ENSPMGG00000005259	UPF2	100	80.267	MGP_CAROLIEiJ_G0023157	Upf2	99	82.358	Mus_caroli
ENSPMGG00000005259	UPF2	100	80.189	ENSMUSG00000043241	Upf2	99	82.163	Mus_musculus
ENSPMGG00000005259	UPF2	100	80.110	MGP_PahariEiJ_G0019217	Upf2	99	82.163	Mus_pahari
ENSPMGG00000005259	UPF2	100	80.425	MGP_SPRETEiJ_G0024075	Upf2	99	82.163	Mus_spretus
ENSPMGG00000005259	UPF2	100	81.618	ENSMPUG00000001064	UPF2	99	80.361	Mustela_putorius_furo
ENSPMGG00000005259	UPF2	100	80.471	ENSMLUG00000000228	UPF2	100	80.579	Myotis_lucifugus
ENSPMGG00000005259	UPF2	100	90.204	ENSNBRG00000013629	UPF2	99	90.204	Neolamprologus_brichardi
ENSPMGG00000005259	UPF2	100	80.377	ENSNLEG00000012058	UPF2	99	79.592	Nomascus_leucogenys
ENSPMGG00000005259	UPF2	72	92.958	ENSOPRG00000006801	-	73	92.958	Ochotona_princeps
ENSPMGG00000005259	UPF2	100	78.964	ENSODEG00000001290	UPF2	99	78.145	Octodon_degus
ENSPMGG00000005259	UPF2	100	90.047	ENSONIG00000017991	UPF2	99	90.047	Oreochromis_niloticus
ENSPMGG00000005259	UPF2	100	79.890	ENSOCUG00000006230	UPF2	100	79.499	Oryctolagus_cuniculus
ENSPMGG00000005259	UPF2	100	89.238	ENSORLG00000017189	UPF2	99	88.531	Oryzias_latipes
ENSPMGG00000005259	UPF2	100	89.159	ENSORLG00020005969	UPF2	99	88.452	Oryzias_latipes_hni
ENSPMGG00000005259	UPF2	100	89.238	ENSORLG00015005713	UPF2	99	88.531	Oryzias_latipes_hsok
ENSPMGG00000005259	UPF2	100	86.399	ENSOMEG00000023420	UPF2	98	85.692	Oryzias_melastigma
ENSPMGG00000005259	UPF2	100	80.754	ENSOGAG00000005796	UPF2	99	79.654	Otolemur_garnettii
ENSPMGG00000005259	UPF2	100	81.098	ENSOARG00000014587	UPF2	99	80.157	Ovis_aries
ENSPMGG00000005259	UPF2	100	81.147	ENSPPRG00000000690	UPF2	99	81.068	Panthera_pardus
ENSPMGG00000005259	UPF2	100	81.147	ENSPTIG00000008867	UPF2	99	81.068	Panthera_tigris_altaica
ENSPMGG00000005259	UPF2	100	80.377	ENSPTRG00000002291	UPF2	99	79.749	Pan_troglodytes
ENSPMGG00000005259	UPF2	100	80.691	ENSPANG00000023399	UPF2	99	79.749	Papio_anubis
ENSPMGG00000005259	UPF2	100	84.886	ENSPKIG00000025502	UPF2	99	83.777	Paramormyrops_kingsleyae
ENSPMGG00000005259	UPF2	59	80.132	ENSPSIG00000015158	UPF2	95	79.735	Pelodiscus_sinensis
ENSPMGG00000005259	UPF2	93	74.344	ENSPEMG00000015731	Upf2	99	74.344	Peromyscus_maniculatus_bairdii
ENSPMGG00000005259	UPF2	100	81.725	ENSPCIG00000006656	UPF2	100	80.911	Phascolarctos_cinereus
ENSPMGG00000005259	UPF2	100	88.610	ENSPFOG00000017118	UPF2	99	88.845	Poecilia_formosa
ENSPMGG00000005259	UPF2	100	88.688	ENSPLAG00000005094	UPF2	99	88.924	Poecilia_latipinna
ENSPMGG00000005259	UPF2	100	88.688	ENSPMEG00000017009	UPF2	99	88.924	Poecilia_mexicana
ENSPMGG00000005259	UPF2	100	89.153	ENSPREG00000021880	UPF2	100	89.390	Poecilia_reticulata
ENSPMGG00000005259	UPF2	66	82.697	ENSPPYG00000002089	-	99	81.623	Pongo_abelii
ENSPMGG00000005259	UPF2	86	73.925	ENSPCAG00000000684	UPF2	99	68.028	Procavia_capensis
ENSPMGG00000005259	UPF2	100	74.647	ENSPVAG00000017286	UPF2	99	73.626	Pteropus_vampyrus
ENSPMGG00000005259	UPF2	100	87.618	ENSPNYG00000017096	UPF2	100	87.618	Pundamilia_nyererei
ENSPMGG00000005259	UPF2	100	86.005	ENSPNAG00000009357	UPF2	100	84.815	Pygocentrus_nattereri
ENSPMGG00000005259	UPF2	100	77.248	ENSRNOG00000023593	Upf2	98	92.045	Rattus_norvegicus
ENSPMGG00000005259	UPF2	100	79.497	ENSRBIG00000037780	UPF2	100	78.633	Rhinopithecus_bieti
ENSPMGG00000005259	UPF2	100	80.220	ENSRROG00000043547	UPF2	99	79.592	Rhinopithecus_roxellana
ENSPMGG00000005259	UPF2	100	79.811	ENSSBOG00000020012	UPF2	99	78.397	Saimiri_boliviensis_boliviensis
ENSPMGG00000005259	UPF2	100	83.894	ENSSFOG00015023788	upf2	100	83.464	Scleropages_formosus
ENSPMGG00000005259	UPF2	90	88.619	ENSSMAG00000007637	UPF2	100	86.392	Scophthalmus_maximus
ENSPMGG00000005259	UPF2	100	90.424	ENSSDUG00000017244	UPF2	99	89.874	Seriola_dumerili
ENSPMGG00000005259	UPF2	100	88.328	ENSSLDG00000016866	UPF2	100	88.082	Seriola_lalandi_dorsalis
ENSPMGG00000005259	UPF2	100	80.063	ENSSARG00000008615	UPF2	99	79.576	Sorex_araneus
ENSPMGG00000005259	UPF2	100	79.451	ENSSPUG00000014544	UPF2	99	79.216	Sphenodon_punctatus
ENSPMGG00000005259	UPF2	68	83.103	ENSSSCG00000011117	-	99	81.954	Sus_scrofa
ENSPMGG00000005259	UPF2	99	81.053	ENSTGUG00000002163	-	100	80.848	Taeniopygia_guttata
ENSPMGG00000005259	UPF2	100	88.697	ENSTRUG00000007519	UPF2	99	88.776	Takifugu_rubripes
ENSPMGG00000005259	UPF2	100	85.625	ENSTNIG00000004453	UPF2	99	85.893	Tetraodon_nigroviridis
ENSPMGG00000005259	UPF2	93	72.382	ENSTBEG00000012679	UPF2	93	72.973	Tupaia_belangeri
ENSPMGG00000005259	UPF2	100	80.110	ENSTTRG00000016388	UPF2	99	78.852	Tursiops_truncatus
ENSPMGG00000005259	UPF2	87	92.135	ENSUAMG00000023560	UPF2	99	92.135	Ursus_americanus
ENSPMGG00000005259	UPF2	100	81.618	ENSUMAG00000012953	UPF2	95	80.361	Ursus_maritimus
ENSPMGG00000005259	UPF2	82	93.548	ENSVPAG00000006763	UPF2	86	93.548	Vicugna_pacos
ENSPMGG00000005259	UPF2	100	81.304	ENSVVUG00000006166	UPF2	99	80.518	Vulpes_vulpes
ENSPMGG00000005259	UPF2	100	77.312	ENSXETG00000033103	UPF2	91	81.239	Xenopus_tropicalis
ENSPMGG00000005259	UPF2	100	88.217	ENSXCOG00000011604	UPF2	100	88.610	Xiphophorus_couchianus
ENSPMGG00000005259	UPF2	100	88.688	ENSXMAG00000017209	UPF2	99	88.688	Xiphophorus_maculatus