EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMGG00000005467 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Periophthalmus_magnuspinnatus
Status: putative
Strand: Minus strand
Length: 1555 bases
Position: chrKN464475.1:162781-164335
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMGP00000006696	RRM_1	PF00076.22	1e-33	1	2
ENSPMGP00000006696	RRM_1	PF00076.22	1e-33	2	2
ENSPMGP00000006758	RRM_1	PF00076.22	1.2e-33	1	2
ENSPMGP00000006758	RRM_1	PF00076.22	1.2e-33	2	2
ENSPMGP00000006804	RRM_1	PF00076.22	1.2e-33	1	2
ENSPMGP00000006804	RRM_1	PF00076.22	1.2e-33	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMGT00000007236	-	729	-	ENSPMGP00000006804	242 (aa)	-	-
ENSPMGT00000007189	-	720	-	ENSPMGP00000006758	239 (aa)	-	-
ENSPMGT00000007121	-	696	-	ENSPMGP00000006696	231 (aa)	-	-

Gene Model

Click here to download ENSPMGG00000005467's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMGG00000005467's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMGG00000005467	-	99	85.470	ENSG00000136450	SRSF1	96	91.971	Homo_sapiens
ENSPMGG00000005467	-	77	92.737	ENSAPOG00000008542	-	80	87.895	Acanthochromis_polyacanthus
ENSPMGG00000005467	-	79	87.565	ENSAPOG00000002748	-	96	82.627	Acanthochromis_polyacanthus
ENSPMGG00000005467	-	77	88.827	ENSAMEG00000002635	SRSF1	96	85.837	Ailuropoda_melanoleuca
ENSPMGG00000005467	-	97	78.059	ENSACIG00000008091	srsf1a	85	88.205	Amphilophus_citrinellus
ENSPMGG00000005467	-	77	87.958	ENSAOCG00000000337	-	83	83.981	Amphiprion_ocellaris
ENSPMGG00000005467	-	97	77.731	ENSAOCG00000010671	-	96	83.051	Amphiprion_ocellaris
ENSPMGG00000005467	-	77	87.958	ENSAPEG00000023352	-	82	83.981	Amphiprion_percula
ENSPMGG00000005467	-	97	77.731	ENSAPEG00000009915	-	96	83.051	Amphiprion_percula
ENSPMGG00000005467	-	79	89.005	ENSATEG00000021567	-	81	89.691	Anabas_testudineus
ENSPMGG00000005467	-	79	88.083	ENSATEG00000022403	-	96	83.193	Anabas_testudineus
ENSPMGG00000005467	-	78	83.420	ENSACAG00000005542	-	96	84.100	Anolis_carolinensis
ENSPMGG00000005467	-	79	65.385	ENSANAG00000025417	-	96	66.094	Aotus_nancymaae
ENSPMGG00000005467	-	99	85.470	ENSANAG00000020583	-	94	84.937	Aotus_nancymaae
ENSPMGG00000005467	-	55	72.258	ENSAMXG00000024373	-	90	74.112	Astyanax_mexicanus
ENSPMGG00000005467	-	95	84.348	ENSAMXG00000035996	srsf1a	95	85.417	Astyanax_mexicanus
ENSPMGG00000005467	-	99	85.470	ENSBTAG00000014766	SRSF1	96	84.937	Bos_taurus
ENSPMGG00000005467	-	99	85.470	ENSCJAG00000041713	-	94	84.937	Callithrix_jacchus
ENSPMGG00000005467	-	77	79.348	ENSCJAG00000008111	-	87	79.592	Callithrix_jacchus
ENSPMGG00000005467	-	99	85.470	ENSCAFG00000017430	SRSF1	94	84.937	Canis_familiaris
ENSPMGG00000005467	-	99	85.470	ENSCAFG00020025632	-	94	84.937	Canis_lupus_dingo
ENSPMGG00000005467	-	78	84.456	ENSCHIG00000010787	SRSF1	96	84.937	Capra_hircus
ENSPMGG00000005467	-	99	85.470	ENSTSYG00000013899	-	94	84.937	Carlito_syrichta
ENSPMGG00000005467	-	99	85.470	ENSCPOG00000032681	-	96	84.937	Cavia_porcellus
ENSPMGG00000005467	-	99	85.470	ENSCCAG00000029484	-	96	84.937	Cebus_capucinus
ENSPMGG00000005467	-	99	85.470	ENSCATG00000042294	-	94	84.937	Cercocebus_atys
ENSPMGG00000005467	-	99	85.470	ENSCLAG00000014707	-	96	84.937	Chinchilla_lanigera
ENSPMGG00000005467	-	99	84.615	ENSCSAG00000005642	-	94	84.100	Chlorocebus_sabaeus
ENSPMGG00000005467	-	78	84.456	ENSCHOG00000001899	SRSF1	96	84.937	Choloepus_hoffmanni
ENSPMGG00000005467	-	99	85.043	ENSCPBG00000009851	-	96	84.519	Chrysemys_picta_bellii
ENSPMGG00000005467	-	99	85.470	ENSCANG00000029726	-	94	84.937	Colobus_angolensis_palliatus
ENSPMGG00000005467	-	99	85.470	ENSCGRG00001000670	Srsf1	94	84.937	Cricetulus_griseus_chok1gshd
ENSPMGG00000005467	-	99	85.470	ENSCGRG00000005590	Srsf1	96	84.937	Cricetulus_griseus_crigri
ENSPMGG00000005467	-	78	82.212	ENSCSEG00000009973	-	81	80.189	Cynoglossus_semilaevis
ENSPMGG00000005467	-	79	88.360	ENSCSEG00000014272	-	96	80.172	Cynoglossus_semilaevis
ENSPMGG00000005467	-	77	87.634	ENSCVAG00000005458	-	90	86.264	Cyprinodon_variegatus
ENSPMGG00000005467	-	79	88.083	ENSCVAG00000018617	-	96	83.051	Cyprinodon_variegatus
ENSPMGG00000005467	-	78	81.281	ENSDARG00000057691	srsf1a	99	81.152	Danio_rerio
ENSPMGG00000005467	-	78	85.492	ENSDARG00000017843	srsf1b	80	86.735	Danio_rerio
ENSPMGG00000005467	-	99	85.470	ENSDNOG00000011737	-	94	84.937	Dasypus_novemcinctus
ENSPMGG00000005467	-	99	85.470	ENSDORG00000015082	Srsf1	96	84.937	Dipodomys_ordii
ENSPMGG00000005467	-	73	84.444	ENSETEG00000005349	-	62	85.556	Echinops_telfairi
ENSPMGG00000005467	-	99	85.470	ENSEASG00005002922	-	94	84.937	Equus_asinus_asinus
ENSPMGG00000005467	-	78	84.456	ENSECAG00000016654	SRSF1	96	84.937	Equus_caballus
ENSPMGG00000005467	-	72	86.628	ENSEEUG00000009255	-	62	86.667	Erinaceus_europaeus
ENSPMGG00000005467	-	78	86.458	ENSELUG00000021646	srsf1a	95	77.824	Esox_lucius
ENSPMGG00000005467	-	99	85.470	ENSFCAG00000002250	-	94	84.937	Felis_catus
ENSPMGG00000005467	-	78	91.729	ENSFALG00000005062	-	94	71.130	Ficedula_albicollis
ENSPMGG00000005467	-	99	85.470	ENSFDAG00000010646	-	96	84.937	Fukomys_damarensis
ENSPMGG00000005467	-	97	77.731	ENSFHEG00000003174	srsf1a	96	83.051	Fundulus_heteroclitus
ENSPMGG00000005467	-	93	85.047	ENSGMOG00000014787	-	81	85.263	Gadus_morhua
ENSPMGG00000005467	-	78	83.938	ENSGALG00000005525	SRSF1	96	84.519	Gallus_gallus
ENSPMGG00000005467	-	78	90.374	ENSGACG00000020621	srsf1b	97	83.691	Gasterosteus_aculeatus
ENSPMGG00000005467	-	99	85.043	ENSGAGG00000022965	-	94	84.519	Gopherus_agassizii
ENSPMGG00000005467	-	99	85.470	ENSGGOG00000004386	SRSF1	94	84.937	Gorilla_gorilla
ENSPMGG00000005467	-	97	78.151	ENSHBUG00000016788	srsf1a	96	83.404	Haplochromis_burtoni
ENSPMGG00000005467	-	68	85.366	ENSHGLG00000000600	-	96	87.379	Heterocephalus_glaber_female
ENSPMGG00000005467	-	68	85.366	ENSHGLG00000000669	-	96	87.379	Heterocephalus_glaber_female
ENSPMGG00000005467	-	99	85.470	ENSHGLG00100016906	-	96	84.937	Heterocephalus_glaber_male
ENSPMGG00000005467	-	79	82.412	ENSHCOG00000018918	srsf1a	79	82.673	Hippocampus_comes
ENSPMGG00000005467	-	78	85.417	ENSIPUG00000008750	srsf1b	80	87.179	Ictalurus_punctatus
ENSPMGG00000005467	-	96	82.988	ENSIPUG00000017039	srsf1a	96	84.774	Ictalurus_punctatus
ENSPMGG00000005467	-	99	85.470	ENSSTOG00000000243	-	96	84.937	Ictidomys_tridecemlineatus
ENSPMGG00000005467	-	50	71.429	ENSJJAG00000014464	-	95	74.603	Jaculus_jaculus
ENSPMGG00000005467	-	99	85.470	ENSJJAG00000000102	-	96	84.937	Jaculus_jaculus
ENSPMGG00000005467	-	79	87.113	ENSKMAG00000019232	srsf1a	96	83.122	Kryptolebias_marmoratus
ENSPMGG00000005467	-	77	83.511	ENSLBEG00000015294	-	96	80.165	Labrus_bergylta
ENSPMGG00000005467	-	97	76.891	ENSLBEG00000020864	-	96	82.203	Labrus_bergylta
ENSPMGG00000005467	-	78	84.896	ENSLACG00000014160	srsf1a	88	85.043	Latimeria_chalumnae
ENSPMGG00000005467	-	78	84.375	ENSLOCG00000005994	srsf1a	96	84.874	Lepisosteus_oculatus
ENSPMGG00000005467	-	77	87.151	ENSLAFG00000025743	SRSF1	96	84.937	Loxodonta_africana
ENSPMGG00000005467	-	99	85.470	ENSMFAG00000040003	-	96	84.937	Macaca_fascicularis
ENSPMGG00000005467	-	99	85.470	ENSMMUG00000004725	SRSF1	94	84.937	Macaca_mulatta
ENSPMGG00000005467	-	99	82.479	ENSMMUG00000003260	-	92	83.691	Macaca_mulatta
ENSPMGG00000005467	-	99	82.051	ENSMNEG00000015983	-	92	83.262	Macaca_nemestrina
ENSPMGG00000005467	-	99	85.470	ENSMNEG00000027680	-	94	84.937	Macaca_nemestrina
ENSPMGG00000005467	-	99	83.406	ENSMLEG00000015243	-	94	82.051	Mandrillus_leucophaeus
ENSPMGG00000005467	-	78	84.456	ENSMLEG00000040509	SRSF1	96	84.937	Mandrillus_leucophaeus
ENSPMGG00000005467	-	77	90.217	ENSMAMG00000019691	-	83	86.935	Mastacembelus_armatus
ENSPMGG00000005467	-	79	88.083	ENSMAMG00000018454	-	96	83.051	Mastacembelus_armatus
ENSPMGG00000005467	-	78	93.583	ENSMAMG00000019687	-	81	91.237	Mastacembelus_armatus
ENSPMGG00000005467	-	99	85.470	ENSMAUG00000021845	Srsf1	96	84.937	Mesocricetus_auratus
ENSPMGG00000005467	-	99	85.470	ENSMICG00000013639	-	94	84.937	Microcebus_murinus
ENSPMGG00000005467	-	99	85.470	ENSMOCG00000001996	Srsf1	96	84.937	Microtus_ochrogaster
ENSPMGG00000005467	-	97	76.891	ENSMMOG00000014354	srsf1a	85	86.224	Mola_mola
ENSPMGG00000005467	-	73	86.188	ENSMODG00000014781	-	62	86.740	Monodelphis_domestica
ENSPMGG00000005467	-	81	76.882	ENSMALG00000007763	-	79	78.421	Monopterus_albus
ENSPMGG00000005467	-	79	88.083	ENSMALG00000017129	-	77	88.265	Monopterus_albus
ENSPMGG00000005467	-	99	85.470	MGP_CAROLIEiJ_G0016943	Srsf1	96	84.937	Mus_caroli
ENSPMGG00000005467	-	99	85.470	ENSMUSG00000018379	Srsf1	96	84.937	Mus_musculus
ENSPMGG00000005467	-	99	85.470	MGP_PahariEiJ_G0018074	Srsf1	96	84.937	Mus_pahari
ENSPMGG00000005467	-	99	85.470	MGP_SPRETEiJ_G0017790	Srsf1	96	84.937	Mus_spretus
ENSPMGG00000005467	-	78	84.456	ENSMPUG00000015369	SRSF1	96	84.937	Mustela_putorius_furo
ENSPMGG00000005467	-	80	85.946	ENSMLUG00000023995	-	96	82.833	Myotis_lucifugus
ENSPMGG00000005467	-	78	84.456	ENSMLUG00000011040	SRSF1	96	84.937	Myotis_lucifugus
ENSPMGG00000005467	-	78	84.456	ENSNGAG00000011395	Srsf1	96	84.937	Nannospalax_galili
ENSPMGG00000005467	-	99	75.536	ENSNBRG00000008041	srsf1b	81	75.773	Neolamprologus_brichardi
ENSPMGG00000005467	-	99	85.470	ENSNLEG00000008088	-	94	84.937	Nomascus_leucogenys
ENSPMGG00000005467	-	50	77.165	ENSMEUG00000002783	-	100	75.591	Notamacropus_eugenii
ENSPMGG00000005467	-	55	84.091	ENSOPRG00000001234	-	95	86.207	Ochotona_princeps
ENSPMGG00000005467	-	99	85.470	ENSODEG00000011481	-	95	86.383	Octodon_degus
ENSPMGG00000005467	-	79	88.601	ENSONIG00000013160	-	96	83.475	Oreochromis_niloticus
ENSPMGG00000005467	-	95	85.268	ENSONIG00000004860	-	82	85.930	Oreochromis_niloticus
ENSPMGG00000005467	-	100	65.863	ENSOCUG00000010894	-	79	68.041	Oryctolagus_cuniculus
ENSPMGG00000005467	-	79	88.083	ENSORLG00000004580	srsf1a	96	83.051	Oryzias_latipes
ENSPMGG00000005467	-	97	77.731	ENSORLG00020009456	srsf1a	96	83.051	Oryzias_latipes_hni
ENSPMGG00000005467	-	97	77.731	ENSORLG00015014384	srsf1a	96	82.627	Oryzias_latipes_hsok
ENSPMGG00000005467	-	74	86.782	ENSOMEG00000004106	srsf1a	89	81.106	Oryzias_melastigma
ENSPMGG00000005467	-	92	77.778	ENSOGAG00000025950	-	96	84.937	Otolemur_garnettii
ENSPMGG00000005467	-	77	87.709	ENSOARG00000008323	SRSF1	96	84.549	Ovis_aries
ENSPMGG00000005467	-	99	85.470	ENSPPAG00000043403	-	96	84.937	Pan_paniscus
ENSPMGG00000005467	-	99	85.470	ENSPPRG00000004238	-	96	84.937	Panthera_pardus
ENSPMGG00000005467	-	99	85.470	ENSPTRG00000049077	SRSF1	94	84.937	Pan_troglodytes
ENSPMGG00000005467	-	79	67.368	ENSPANG00000030275	-	72	91.803	Papio_anubis
ENSPMGG00000005467	-	99	85.470	ENSPANG00000022305	-	94	84.937	Papio_anubis
ENSPMGG00000005467	-	79	84.896	ENSPKIG00000007204	srsf1a	96	85.470	Paramormyrops_kingsleyae
ENSPMGG00000005467	-	79	84.264	ENSPKIG00000012857	srsf1b	80	87.179	Paramormyrops_kingsleyae
ENSPMGG00000005467	-	78	76.923	ENSPSIG00000009000	-	96	78.838	Pelodiscus_sinensis
ENSPMGG00000005467	-	97	78.632	ENSPMGG00000013112	-	96	80.247	Periophthalmus_magnuspinnatus
ENSPMGG00000005467	-	99	85.470	ENSPEMG00000021416	Srsf1	96	84.937	Peromyscus_maniculatus_bairdii
ENSPMGG00000005467	-	78	85.052	ENSPCIG00000006076	-	96	84.583	Phascolarctos_cinereus
ENSPMGG00000005467	-	79	87.302	ENSPFOG00000018325	-	71	85.787	Poecilia_formosa
ENSPMGG00000005467	-	79	87.302	ENSPLAG00000008416	srsf1b	80	85.787	Poecilia_latipinna
ENSPMGG00000005467	-	79	87.302	ENSPMEG00000002388	-	80	85.787	Poecilia_mexicana
ENSPMGG00000005467	-	50	82.114	ENSPMEG00000020607	-	99	83.740	Poecilia_mexicana
ENSPMGG00000005467	-	50	82.114	ENSPMEG00000014312	-	99	83.740	Poecilia_mexicana
ENSPMGG00000005467	-	79	88.083	ENSPREG00000009667	srsf1a	96	83.051	Poecilia_reticulata
ENSPMGG00000005467	-	99	85.470	ENSPPYG00000008240	SRSF1	96	84.937	Pongo_abelii
ENSPMGG00000005467	-	78	84.456	ENSPCAG00000005199	SRSF1	96	84.937	Procavia_capensis
ENSPMGG00000005467	-	99	85.470	ENSPCOG00000023654	-	96	84.937	Propithecus_coquereli
ENSPMGG00000005467	-	78	68.367	ENSPCOG00000025736	-	95	69.474	Propithecus_coquereli
ENSPMGG00000005467	-	56	97.143	ENSPVAG00000000519	-	71	92.857	Pteropus_vampyrus
ENSPMGG00000005467	-	95	88.739	ENSPNAG00000022241	srsf1a	95	88.362	Pygocentrus_nattereri
ENSPMGG00000005467	-	77	86.667	ENSPNAG00000014601	srsf1b	81	85.128	Pygocentrus_nattereri
ENSPMGG00000005467	-	78	84.456	ENSRNOG00000050323	Srsf1	96	84.937	Rattus_norvegicus
ENSPMGG00000005467	-	99	85.470	ENSRBIG00000034445	-	94	84.937	Rhinopithecus_bieti
ENSPMGG00000005467	-	99	85.470	ENSRROG00000041506	-	96	84.937	Rhinopithecus_roxellana
ENSPMGG00000005467	-	99	85.470	ENSSBOG00000025377	-	96	84.937	Saimiri_boliviensis_boliviensis
ENSPMGG00000005467	-	78	85.052	ENSSHAG00000002552	-	96	84.583	Sarcophilus_harrisii
ENSPMGG00000005467	-	77	87.978	ENSSFOG00015004800	srsf1a	94	87.124	Scleropages_formosus
ENSPMGG00000005467	-	79	87.565	ENSSMAG00000007018	-	96	82.203	Scophthalmus_maximus
ENSPMGG00000005467	-	78	87.000	ENSSMAG00000009719	-	96	83.740	Scophthalmus_maximus
ENSPMGG00000005467	-	99	71.730	ENSSDUG00000003929	-	85	76.355	Seriola_dumerili
ENSPMGG00000005467	-	97	76.891	ENSSDUG00000011303	-	96	82.203	Seriola_dumerili
ENSPMGG00000005467	-	79	87.047	ENSSLDG00000010543	-	96	82.203	Seriola_lalandi_dorsalis
ENSPMGG00000005467	-	78	81.383	ENSSLDG00000016868	-	79	80.513	Seriola_lalandi_dorsalis
ENSPMGG00000005467	-	95	72.103	ENSSLDG00000016895	-	78	80.645	Seriola_lalandi_dorsalis
ENSPMGG00000005467	-	72	86.628	ENSSARG00000010949	-	62	86.667	Sorex_araneus
ENSPMGG00000005467	-	99	85.043	ENSSPUG00000000804	-	94	84.519	Sphenodon_punctatus
ENSPMGG00000005467	-	79	87.629	ENSSPAG00000022562	-	96	82.700	Stegastes_partitus
ENSPMGG00000005467	-	79	84.466	ENSSPAG00000014152	-	81	82.297	Stegastes_partitus
ENSPMGG00000005467	-	99	85.470	ENSSSCG00000017626	-	96	84.937	Sus_scrofa
ENSPMGG00000005467	-	55	83.459	ENSTGUG00000008416	-	95	85.714	Taeniopygia_guttata
ENSPMGG00000005467	-	79	87.047	ENSTRUG00000003691	srsf1a	96	82.203	Takifugu_rubripes
ENSPMGG00000005467	-	79	87.113	ENSTNIG00000016223	srsf1a	96	82.278	Tetraodon_nigroviridis
ENSPMGG00000005467	-	73	82.778	ENSTBEG00000015378	-	62	85.000	Tupaia_belangeri
ENSPMGG00000005467	-	55	84.091	ENSTTRG00000007310	SRSF1	95	86.207	Tursiops_truncatus
ENSPMGG00000005467	-	78	84.456	ENSUAMG00000009858	SRSF1	96	84.937	Ursus_americanus
ENSPMGG00000005467	-	99	85.470	ENSUMAG00000000455	-	94	84.937	Ursus_maritimus
ENSPMGG00000005467	-	78	83.938	ENSVPAG00000010094	SRSF1	96	84.519	Vicugna_pacos
ENSPMGG00000005467	-	99	85.470	ENSVVUG00000011882	-	94	84.937	Vulpes_vulpes
ENSPMGG00000005467	-	77	90.503	ENSXETG00000008954	srsf1	97	77.519	Xenopus_tropicalis
ENSPMGG00000005467	-	79	88.083	ENSXMAG00000011766	srsf1a	96	83.051	Xiphophorus_maculatus