EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMGG00000005785 (Gene tree)
Gene ID: -
Gene Symbol: chd1
Alias: -
Full Name: chromodomain helicase DNA binding protein 1
Gene Type: protein_coding
Species: Periophthalmus_magnuspinnatus
Status: putative
Strand: Plus strand
Length: 7683 bases
Position: chrKN462367.1:3374864-3382546
Accession: ZDB-GENE-030131-7120
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMGP00000006932	ResIII	PF04851.15	2.5e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMGT00000007368	-	3972	-	ENSPMGP00000006932	1323 (aa)	-	-

Gene Model

Click here to download ENSPMGG00000005785's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMGG00000005785's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMGG00000005785	chd1	93	81.315	ENSG00000153922	CHD1	73	81.315	Homo_sapiens
ENSPMGG00000005785	chd1	85	92.458	ENSAPOG00000005764	chd1	96	92.458	Acanthochromis_polyacanthus
ENSPMGG00000005785	chd1	91	89.893	ENSAOCG00000023105	chd1	77	90.140	Amphiprion_ocellaris
ENSPMGG00000005785	chd1	91	91.379	ENSAPEG00000013544	chd1	77	91.626	Amphiprion_percula
ENSPMGG00000005785	chd1	93	90.256	ENSATEG00000010676	chd1	76	90.647	Anabas_testudineus
ENSPMGG00000005785	chd1	91	87.977	ENSAMXG00000010843	chd1	92	88.329	Astyanax_mexicanus
ENSPMGG00000005785	chd1	93	81.395	ENSCATG00000032035	CHD1	74	81.315	Cercocebus_atys
ENSPMGG00000005785	chd1	93	81.395	ENSCSAG00000015339	CHD1	73	81.315	Chlorocebus_sabaeus
ENSPMGG00000005785	chd1	67	78.635	ENSCPBG00000015831	CHD1	88	78.603	Chrysemys_picta_bellii
ENSPMGG00000005785	chd1	93	78.749	ENSCANG00000036916	CHD1	73	78.428	Colobus_angolensis_palliatus
ENSPMGG00000005785	chd1	93	80.849	ENSCGRG00001023943	Chd1	73	81.155	Cricetulus_griseus_chok1gshd
ENSPMGG00000005785	chd1	93	80.849	ENSCGRG00000008652	Chd1	73	81.155	Cricetulus_griseus_crigri
ENSPMGG00000005785	chd1	91	88.898	ENSCSEG00000009553	chd1	77	88.898	Cynoglossus_semilaevis
ENSPMGG00000005785	chd1	93	81.180	ENSEASG00005016110	CHD1	89	81.425	Equus_asinus_asinus
ENSPMGG00000005785	chd1	92	87.236	ENSELUG00000017677	chd1	75	87.317	Esox_lucius
ENSPMGG00000005785	chd1	91	88.661	ENSFHEG00000021164	chd1	87	89.465	Fundulus_heteroclitus
ENSPMGG00000005785	chd1	99	83.450	ENSGMOG00000001537	chd1	72	85.925	Gadus_morhua
ENSPMGG00000005785	chd1	94	79.338	ENSGALG00000031327	-	76	80.482	Gallus_gallus
ENSPMGG00000005785	chd1	88	91.091	ENSGAFG00000019880	chd1	75	91.091	Gambusia_affinis
ENSPMGG00000005785	chd1	93	77.689	ENSGGOG00000011463	CHD1	73	77.262	Gorilla_gorilla
ENSPMGG00000005785	chd1	91	90.977	ENSHCOG00000014222	chd1	76	90.700	Hippocampus_comes
ENSPMGG00000005785	chd1	90	90.201	ENSIPUG00000001369	chd1	75	90.201	Ictalurus_punctatus
ENSPMGG00000005785	chd1	68	82.444	ENSLAFG00000023183	CHD1	84	82.444	Loxodonta_africana
ENSPMGG00000005785	chd1	93	81.395	ENSMFAG00000031226	CHD1	73	81.315	Macaca_fascicularis
ENSPMGG00000005785	chd1	93	81.476	ENSMMUG00000014090	CHD1	87	81.395	Macaca_mulatta
ENSPMGG00000005785	chd1	93	81.395	ENSMNEG00000045073	CHD1	73	81.315	Macaca_nemestrina
ENSPMGG00000005785	chd1	93	76.003	ENSMLEG00000041096	CHD1	72	76.806	Mandrillus_leucophaeus
ENSPMGG00000005785	chd1	91	92.168	ENSMZEG00005010957	chd1	91	92.168	Maylandia_zebra
ENSPMGG00000005785	chd1	98	76.547	ENSMOCG00000019121	Chd1	71	81.940	Microtus_ochrogaster
ENSPMGG00000005785	chd1	56	81.349	ENSMODG00000019266	-	96	82.787	Monodelphis_domestica
ENSPMGG00000005785	chd1	93	90.120	ENSMALG00000013317	chd1	88	90.248	Monopterus_albus
ENSPMGG00000005785	chd1	93	80.738	MGP_CAROLIEiJ_G0021099	Chd1	84	83.113	Mus_caroli
ENSPMGG00000005785	chd1	93	80.819	ENSMUSG00000023852	Chd1	84	83.223	Mus_musculus
ENSPMGG00000005785	chd1	93	80.884	MGP_PahariEiJ_G0023414	Chd1	84	83.021	Mus_pahari
ENSPMGG00000005785	chd1	91	91.376	ENSNBRG00000006860	chd1	76	91.376	Neolamprologus_brichardi
ENSPMGG00000005785	chd1	93	81.315	ENSNLEG00000014493	CHD1	73	81.315	Nomascus_leucogenys
ENSPMGG00000005785	chd1	94	79.937	ENSOANG00000004891	CHD1	75	84.447	Ornithorhynchus_anatinus
ENSPMGG00000005785	chd1	68	88.035	ENSORLG00015016725	chd1	85	88.106	Oryzias_latipes_hsok
ENSPMGG00000005785	chd1	93	79.761	ENSPPAG00000043367	CHD1	74	79.984	Pan_paniscus
ENSPMGG00000005785	chd1	93	81.395	ENSPTRG00000017103	CHD1	73	81.315	Pan_troglodytes
ENSPMGG00000005785	chd1	93	81.395	ENSPANG00000006387	CHD1	73	81.315	Papio_anubis
ENSPMGG00000005785	chd1	92	79.691	ENSPKIG00000024719	chd1	72	81.004	Paramormyrops_kingsleyae
ENSPMGG00000005785	chd1	93	81.220	ENSPEMG00000015939	Chd1	73	81.155	Peromyscus_maniculatus_bairdii
ENSPMGG00000005785	chd1	55	88.347	ENSPLAG00000006473	-	75	88.331	Poecilia_latipinna
ENSPMGG00000005785	chd1	93	87.370	ENSPREG00000004209	chd1	75	87.440	Poecilia_reticulata
ENSPMGG00000005785	chd1	93	80.723	ENSRNOG00000014434	Chd1	87	80.738	Rattus_norvegicus
ENSPMGG00000005785	chd1	90	82.456	ENSRBIG00000044325	CHD1	72	82.373	Rhinopithecus_bieti
ENSPMGG00000005785	chd1	93	81.476	ENSRROG00000001726	CHD1	73	81.395	Rhinopithecus_roxellana
ENSPMGG00000005785	chd1	93	85.889	ENSSFOG00015007161	chd1	91	85.668	Scleropages_formosus
ENSPMGG00000005785	chd1	93	91.280	ENSSDUG00000018314	chd1	87	91.339	Seriola_dumerili
ENSPMGG00000005785	chd1	68	87.911	ENSSLDG00000017244	chd1	94	87.911	Seriola_lalandi_dorsalis
ENSPMGG00000005785	chd1	93	91.720	ENSSPAG00000007024	chd1	90	91.667	Stegastes_partitus
ENSPMGG00000005785	chd1	93	87.016	ENSTRUG00000010282	chd1	74	87.903	Takifugu_rubripes
ENSPMGG00000005785	chd1	84	88.571	ENSTNIG00000007101	chd1	87	88.998	Tetraodon_nigroviridis
ENSPMGG00000005785	chd1	100	79.970	ENSXCOG00000017184	chd1	73	85.029	Xiphophorus_couchianus
ENSPMGG00000005785	chd1	91	88.642	ENSXMAG00000014538	chd1	89	88.633	Xiphophorus_maculatus