EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMGG00000005836 (Gene tree)
Gene ID: -
Gene Symbol: pum1
Alias: -
Full Name: pumilio RNA-binding family member 1
Gene Type: protein_coding
Species: Periophthalmus_magnuspinnatus
Status: putative
Strand: Plus strand
Length: 11170 bases
Position: chrKN464860.1:802000-813169
Accession: ZDB-GENE-030131-2074
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMGP00000006998	PUF	PF00806.19	5.1e-71	1	8
ENSPMGP00000006998	PUF	PF00806.19	5.1e-71	2	8
ENSPMGP00000006998	PUF	PF00806.19	5.1e-71	3	8
ENSPMGP00000006998	PUF	PF00806.19	5.1e-71	4	8
ENSPMGP00000006998	PUF	PF00806.19	5.1e-71	5	8
ENSPMGP00000006998	PUF	PF00806.19	5.1e-71	6	8
ENSPMGP00000006998	PUF	PF00806.19	5.1e-71	7	8
ENSPMGP00000006998	PUF	PF00806.19	5.1e-71	8	8

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMGT00000007438	-	2769	-	ENSPMGP00000006998	922 (aa)	-	-

Gene Model

Click here to download ENSPMGG00000005836's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMGG00000005836's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMGG00000005836	pum1	100	82.108	ENSG00000134644	PUM1	100	78.439	Homo_sapiens
ENSPMGG00000005836	pum1	100	99.153	ENSAPOG00000021632	pum1	79	99.153	Acanthochromis_polyacanthus
ENSPMGG00000005836	pum1	100	81.807	ENSAMEG00000017656	PUM1	77	79.559	Ailuropoda_melanoleuca
ENSPMGG00000005836	pum1	100	95.209	ENSACIG00000021013	pum1	79	95.209	Amphilophus_citrinellus
ENSPMGG00000005836	pum1	100	99.153	ENSAOCG00000003944	pum1	79	99.153	Amphiprion_ocellaris
ENSPMGG00000005836	pum1	100	99.153	ENSAPEG00000014550	pum1	79	99.153	Amphiprion_percula
ENSPMGG00000005836	pum1	100	99.153	ENSATEG00000016004	pum1	79	99.153	Anabas_testudineus
ENSPMGG00000005836	pum1	100	82.418	ENSAPLG00000009351	PUM1	80	79.927	Anas_platyrhynchos
ENSPMGG00000005836	pum1	100	81.495	ENSACAG00000000682	PUM1	78	81.740	Anolis_carolinensis
ENSPMGG00000005836	pum1	100	81.885	ENSANAG00000027865	PUM1	100	76.715	Aotus_nancymaae
ENSPMGG00000005836	pum1	87	95.332	ENSACLG00000019354	pum1	75	95.916	Astatotilapia_calliptera
ENSPMGG00000005836	pum1	100	79.157	ENSAMXG00000020607	pum1	54	89.513	Astyanax_mexicanus
ENSPMGG00000005836	pum1	100	82.353	ENSBTAG00000018979	PUM1	100	76.947	Bos_taurus
ENSPMGG00000005836	pum1	100	82.130	ENSCJAG00000006035	PUM1	100	76.819	Callithrix_jacchus
ENSPMGG00000005836	pum1	100	80.270	ENSCAFG00000011205	PUM1	57	86.517	Canis_familiaris
ENSPMGG00000005836	pum1	91	82.118	ENSCAFG00020024616	PUM1	98	79.953	Canis_lupus_dingo
ENSPMGG00000005836	pum1	100	82.353	ENSCHIG00000012952	PUM1	78	92.252	Capra_hircus
ENSPMGG00000005836	pum1	100	81.174	ENSTSYG00000008868	PUM1	100	76.923	Carlito_syrichta
ENSPMGG00000005836	pum1	100	81.663	ENSCPOG00000031613	PUM1	100	76.507	Cavia_porcellus
ENSPMGG00000005836	pum1	100	81.907	ENSCATG00000017991	PUM1	100	76.819	Cercocebus_atys
ENSPMGG00000005836	pum1	90	91.525	ENSCLAG00000007662	PUM1	100	76.507	Chinchilla_lanigera
ENSPMGG00000005836	pum1	100	80.241	ENSCSAG00000001028	PUM1	80	78.019	Chlorocebus_sabaeus
ENSPMGG00000005836	pum1	90	72.669	ENSCHOG00000010245	PUM1	73	68.285	Choloepus_hoffmanni
ENSPMGG00000005836	pum1	90	92.494	ENSCPBG00000009288	PUM1	100	77.211	Chrysemys_picta_bellii
ENSPMGG00000005836	pum1	100	82.007	ENSCANG00000042606	PUM1	100	76.819	Colobus_angolensis_palliatus
ENSPMGG00000005836	pum1	100	81.840	ENSCGRG00001024949	Pum1	100	78.193	Cricetulus_griseus_chok1gshd
ENSPMGG00000005836	pum1	100	81.840	ENSCGRG00000014197	Pum1	100	78.193	Cricetulus_griseus_crigri
ENSPMGG00000005836	pum1	87	94.096	ENSCSEG00000015981	pum1	75	94.096	Cynoglossus_semilaevis
ENSPMGG00000005836	pum1	100	99.153	ENSCVAG00000007043	pum1	79	99.153	Cyprinodon_variegatus
ENSPMGG00000005836	pum1	100	87.407	ENSDARG00000099256	pum1	80	84.178	Danio_rerio
ENSPMGG00000005836	pum1	100	82.418	ENSDNOG00000010939	PUM1	80	80.171	Dasypus_novemcinctus
ENSPMGG00000005836	pum1	87	100.000	ENSETEG00000004355	PUM1	64	72.704	Echinops_telfairi
ENSPMGG00000005836	pum1	100	82.029	ENSEASG00005010813	PUM1	80	79.657	Equus_asinus_asinus
ENSPMGG00000005836	pum1	100	82.029	ENSECAG00000021369	PUM1	84	79.657	Equus_caballus
ENSPMGG00000005836	pum1	79	90.444	ENSEEUG00000003871	PUM1	62	90.889	Erinaceus_europaeus
ENSPMGG00000005836	pum1	100	93.220	ENSELUG00000002409	pum1	100	88.203	Esox_lucius
ENSPMGG00000005836	pum1	100	81.973	ENSFCAG00000010374	PUM1	100	76.923	Felis_catus
ENSPMGG00000005836	pum1	100	81.796	ENSFALG00000001214	PUM1	78	81.068	Ficedula_albicollis
ENSPMGG00000005836	pum1	100	81.540	ENSFDAG00000011319	PUM1	100	76.403	Fukomys_damarensis
ENSPMGG00000005836	pum1	71	93.554	ENSGMOG00000010491	pum1	79	91.597	Gadus_morhua
ENSPMGG00000005836	pum1	93	90.369	ENSGALG00000042598	PUM1	77	90.369	Gallus_gallus
ENSPMGG00000005836	pum1	100	96.610	ENSGAFG00000015617	pum1	79	96.610	Gambusia_affinis
ENSPMGG00000005836	pum1	99	96.522	ENSGACG00000005717	pum1	79	96.522	Gasterosteus_aculeatus
ENSPMGG00000005836	pum1	93	90.574	ENSGAGG00000001290	PUM1	77	92.308	Gopherus_agassizii
ENSPMGG00000005836	pum1	100	81.907	ENSGGOG00000011983	PUM1	100	76.819	Gorilla_gorilla
ENSPMGG00000005836	pum1	100	99.153	ENSHBUG00000018718	pum1	79	99.153	Haplochromis_burtoni
ENSPMGG00000005836	pum1	100	81.540	ENSHGLG00000013819	Pum1	100	76.403	Heterocephalus_glaber_female
ENSPMGG00000005836	pum1	100	81.540	ENSHGLG00100008621	Pum1	100	76.403	Heterocephalus_glaber_male
ENSPMGG00000005836	pum1	87	85.767	ENSHCOG00000005149	pum1	75	87.145	Hippocampus_comes
ENSPMGG00000005836	pum1	100	87.639	ENSIPUG00000020421	pum1	80	84.549	Ictalurus_punctatus
ENSPMGG00000005836	pum1	100	81.907	ENSSTOG00000010757	PUM1	100	76.819	Ictidomys_tridecemlineatus
ENSPMGG00000005836	pum1	100	81.907	ENSJJAG00000000530	Pum1	100	76.923	Jaculus_jaculus
ENSPMGG00000005836	pum1	100	97.458	ENSKMAG00000003481	pum1	79	97.458	Kryptolebias_marmoratus
ENSPMGG00000005836	pum1	100	98.305	ENSLBEG00000002527	pum1	79	98.305	Labrus_bergylta
ENSPMGG00000005836	pum1	100	79.684	ENSLACG00000017188	PUM1	79	75.976	Latimeria_chalumnae
ENSPMGG00000005836	pum1	100	86.135	ENSLOCG00000005210	pum1	79	85.276	Lepisosteus_oculatus
ENSPMGG00000005836	pum1	100	81.807	ENSLAFG00000003178	PUM1	80	80.049	Loxodonta_africana
ENSPMGG00000005836	pum1	100	81.907	ENSMFAG00000010291	PUM1	100	76.819	Macaca_fascicularis
ENSPMGG00000005836	pum1	100	81.907	ENSMMUG00000013520	PUM1	100	76.819	Macaca_mulatta
ENSPMGG00000005836	pum1	100	81.907	ENSMNEG00000034639	PUM1	100	76.819	Macaca_nemestrina
ENSPMGG00000005836	pum1	100	82.007	ENSMLEG00000038743	PUM1	100	76.819	Mandrillus_leucophaeus
ENSPMGG00000005836	pum1	100	98.305	ENSMAMG00000011606	pum1	79	98.305	Mastacembelus_armatus
ENSPMGG00000005836	pum1	100	99.153	ENSMZEG00005005834	pum1	79	99.153	Maylandia_zebra
ENSPMGG00000005836	pum1	100	82.641	ENSMGAG00000000724	PUM1	87	80.392	Meleagris_gallopavo
ENSPMGG00000005836	pum1	100	81.618	ENSMAUG00000022090	Pum1	100	78.482	Mesocricetus_auratus
ENSPMGG00000005836	pum1	100	81.663	ENSMICG00000007713	-	100	76.507	Microcebus_murinus
ENSPMGG00000005836	pum1	90	90.821	ENSMICG00000012213	-	78	89.346	Microcebus_murinus
ENSPMGG00000005836	pum1	100	81.763	ENSMOCG00000015463	Pum1	100	78.297	Microtus_ochrogaster
ENSPMGG00000005836	pum1	78	98.789	ENSMMOG00000019817	pum1	77	98.789	Mola_mola
ENSPMGG00000005836	pum1	100	81.197	ENSMODG00000017067	PUM1	80	79.559	Monodelphis_domestica
ENSPMGG00000005836	pum1	100	81.373	MGP_CAROLIEiJ_G0026549	Pum1	100	76.403	Mus_caroli
ENSPMGG00000005836	pum1	100	81.250	ENSMUSG00000028580	Pum1	100	76.403	Mus_musculus
ENSPMGG00000005836	pum1	100	81.250	MGP_PahariEiJ_G0028881	Pum1	100	76.403	Mus_pahari
ENSPMGG00000005836	pum1	100	81.127	MGP_SPRETEiJ_G0027529	Pum1	100	76.403	Mus_spretus
ENSPMGG00000005836	pum1	100	82.152	ENSMPUG00000015454	PUM1	80	79.657	Mustela_putorius_furo
ENSPMGG00000005836	pum1	100	82.130	ENSMLUG00000006490	PUM1	80	79.632	Myotis_lucifugus
ENSPMGG00000005836	pum1	100	81.907	ENSNGAG00000002378	Pum1	100	77.220	Nannospalax_galili
ENSPMGG00000005836	pum1	100	95.208	ENSNBRG00000010689	pum1	100	95.208	Neolamprologus_brichardi
ENSPMGG00000005836	pum1	100	80.416	ENSNLEG00000001151	PUM1	100	75.676	Nomascus_leucogenys
ENSPMGG00000005836	pum1	76	76.361	ENSMEUG00000000976	-	54	78.277	Notamacropus_eugenii
ENSPMGG00000005836	pum1	100	81.907	ENSODEG00000003465	PUM1	100	76.715	Octodon_degus
ENSPMGG00000005836	pum1	100	99.153	ENSONIG00000002290	pum1	79	99.153	Oreochromis_niloticus
ENSPMGG00000005836	pum1	83	66.887	ENSOANG00000004902	-	77	63.782	Ornithorhynchus_anatinus
ENSPMGG00000005836	pum1	99	82.086	ENSOCUG00000008641	PUM1	79	79.705	Oryctolagus_cuniculus
ENSPMGG00000005836	pum1	100	98.305	ENSORLG00000011482	pum1	79	98.305	Oryzias_latipes
ENSPMGG00000005836	pum1	100	98.305	ENSORLG00020019461	pum1	79	98.305	Oryzias_latipes_hni
ENSPMGG00000005836	pum1	100	97.458	ENSORLG00015011375	pum1	79	97.458	Oryzias_latipes_hsok
ENSPMGG00000005836	pum1	78	98.547	ENSOMEG00000009312	pum1	75	98.547	Oryzias_melastigma
ENSPMGG00000005836	pum1	100	77.832	ENSOGAG00000011063	PUM1	80	75.580	Otolemur_garnettii
ENSPMGG00000005836	pum1	90	91.768	ENSOARG00000001899	PUM1	78	92.252	Ovis_aries
ENSPMGG00000005836	pum1	100	81.907	ENSPPAG00000044003	PUM1	100	76.819	Pan_paniscus
ENSPMGG00000005836	pum1	100	82.130	ENSPPRG00000001370	PUM1	100	76.923	Panthera_pardus
ENSPMGG00000005836	pum1	100	82.130	ENSPTIG00000010798	PUM1	100	76.923	Panthera_tigris_altaica
ENSPMGG00000005836	pum1	100	81.907	ENSPTRG00000000453	PUM1	100	76.819	Pan_troglodytes
ENSPMGG00000005836	pum1	100	82.007	ENSPANG00000016338	PUM1	100	76.819	Papio_anubis
ENSPMGG00000005836	pum1	90	92.978	ENSPKIG00000010578	pum1	78	85.501	Paramormyrops_kingsleyae
ENSPMGG00000005836	pum1	100	82.742	ENSPSIG00000014118	PUM1	85	80.123	Pelodiscus_sinensis
ENSPMGG00000005836	pum1	100	81.618	ENSPEMG00000010009	Pum1	100	78.482	Peromyscus_maniculatus_bairdii
ENSPMGG00000005836	pum1	90	91.566	ENSPCIG00000014151	PUM1	100	76.899	Phascolarctos_cinereus
ENSPMGG00000005836	pum1	94	96.667	ENSPFOG00000007289	pum1	99	94.360	Poecilia_formosa
ENSPMGG00000005836	pum1	100	97.458	ENSPLAG00000007256	pum1	86	97.458	Poecilia_latipinna
ENSPMGG00000005836	pum1	92	96.875	ENSPMEG00000019543	pum1	75	96.875	Poecilia_mexicana
ENSPMGG00000005836	pum1	100	97.458	ENSPREG00000005195	pum1	100	94.136	Poecilia_reticulata
ENSPMGG00000005836	pum1	100	81.907	ENSPPYG00000001621	PUM1	78	79.657	Pongo_abelii
ENSPMGG00000005836	pum1	80	93.210	ENSPCAG00000001979	PUM1	61	93.210	Procavia_capensis
ENSPMGG00000005836	pum1	100	81.663	ENSPCOG00000004398	PUM1	100	76.507	Propithecus_coquereli
ENSPMGG00000005836	pum1	100	79.218	ENSPVAG00000005207	PUM1	77	76.961	Pteropus_vampyrus
ENSPMGG00000005836	pum1	100	99.153	ENSPNYG00000009518	pum1	79	99.153	Pundamilia_nyererei
ENSPMGG00000005836	pum1	100	88.628	ENSPNAG00000026728	pum1	80	85.414	Pygocentrus_nattereri
ENSPMGG00000005836	pum1	100	81.863	ENSRNOG00000011709	Pum1	80	79.607	Rattus_norvegicus
ENSPMGG00000005836	pum1	100	81.907	ENSRBIG00000042521	PUM1	100	76.819	Rhinopithecus_bieti
ENSPMGG00000005836	pum1	100	82.108	ENSRROG00000020156	PUM1	100	76.819	Rhinopithecus_roxellana
ENSPMGG00000005836	pum1	100	81.907	ENSSBOG00000032037	PUM1	100	76.819	Saimiri_boliviensis_boliviensis
ENSPMGG00000005836	pum1	100	81.197	ENSSHAG00000010918	PUM1	80	79.559	Sarcophilus_harrisii
ENSPMGG00000005836	pum1	100	97.458	ENSSMAG00000010918	pum1	79	97.458	Scophthalmus_maximus
ENSPMGG00000005836	pum1	100	98.305	ENSSDUG00000009021	pum1	79	98.305	Seriola_dumerili
ENSPMGG00000005836	pum1	100	98.305	ENSSLDG00000009667	pum1	86	98.305	Seriola_lalandi_dorsalis
ENSPMGG00000005836	pum1	97	81.772	ENSSARG00000003055	PUM1	75	79.288	Sorex_araneus
ENSPMGG00000005836	pum1	100	82.396	ENSSPUG00000006267	PUM1	80	79.902	Sphenodon_punctatus
ENSPMGG00000005836	pum1	100	99.153	ENSSPAG00000016636	pum1	79	99.153	Stegastes_partitus
ENSPMGG00000005836	pum1	100	82.029	ENSSSCG00000003591	PUM1	91	79.731	Sus_scrofa
ENSPMGG00000005836	pum1	100	97.458	ENSTRUG00000013121	pum1	100	95.910	Takifugu_rubripes
ENSPMGG00000005836	pum1	100	94.969	ENSTNIG00000016983	pum1	79	95.550	Tetraodon_nigroviridis
ENSPMGG00000005836	pum1	83	91.463	ENSTBEG00000013810	PUM1	68	91.463	Tupaia_belangeri
ENSPMGG00000005836	pum1	91	92.105	ENSTTRG00000007436	PUM1	69	92.105	Tursiops_truncatus
ENSPMGG00000005836	pum1	98	80.337	ENSUAMG00000018262	-	78	77.746	Ursus_americanus
ENSPMGG00000005836	pum1	90	91.325	ENSUMAG00000009211	PUM1	86	91.807	Ursus_maritimus
ENSPMGG00000005836	pum1	100	82.029	ENSVPAG00000005902	PUM1	80	79.779	Vicugna_pacos
ENSPMGG00000005836	pum1	100	81.929	ENSVVUG00000014631	PUM1	78	91.807	Vulpes_vulpes
ENSPMGG00000005836	pum1	100	77.111	ENSXETG00000012904	pum1	79	75.980	Xenopus_tropicalis
ENSPMGG00000005836	pum1	100	96.610	ENSXMAG00000002945	pum1	86	96.610	Xiphophorus_maculatus