EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMGG00000006263 (Gene tree)
Gene ID: -
Gene Symbol: crnkl1
Alias: -
Full Name: crooked neck pre-mRNA splicing factor 1
Gene Type: protein_coding
Species: Periophthalmus_magnuspinnatus
Status: putative
Strand: Plus strand
Length: 14918 bases
Position: chrKN463489.1:45466-60383
Accession: ZDB-GENE-040426-694
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMGP00000007886	HAT	PF02184.16	2e-26	1	2
ENSPMGP00000007886	HAT	PF02184.16	2e-26	2	2
ENSPMGP00000007896	HAT	PF02184.16	4.9e-26	1	2
ENSPMGP00000007896	HAT	PF02184.16	4.9e-26	2	2
ENSPMGP00000007899	HAT	PF02184.16	2.5e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMGT00000008408	-	2043	-	ENSPMGP00000007899	680 (aa)	-	-
ENSPMGT00000008395	-	1986	-	ENSPMGP00000007886	661 (aa)	-	-
ENSPMGT00000008405	-	2100	-	ENSPMGP00000007896	699 (aa)	-	-

Gene Model

Click here to download ENSPMGG00000006263's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMGG00000006263's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMGG00000006263	crnkl1	96	78.971	ENSG00000101343	CRNKL1	99	78.971	Homo_sapiens
ENSPMGG00000006263	crnkl1	99	82.163	ENSAPOG00000009705	crnkl1	99	83.552	Acanthochromis_polyacanthus
ENSPMGG00000006263	crnkl1	95	79.525	ENSAMEG00000000270	CRNKL1	82	79.912	Ailuropoda_melanoleuca
ENSPMGG00000006263	crnkl1	97	83.815	ENSACIG00000015267	crnkl1	92	83.815	Amphilophus_citrinellus
ENSPMGG00000006263	crnkl1	99	81.704	ENSAOCG00000021964	crnkl1	95	81.704	Amphiprion_ocellaris
ENSPMGG00000006263	crnkl1	97	83.671	ENSAPEG00000015041	crnkl1	90	85.778	Amphiprion_percula
ENSPMGG00000006263	crnkl1	96	84.853	ENSATEG00000001068	crnkl1	89	84.853	Anabas_testudineus
ENSPMGG00000006263	crnkl1	96	76.912	ENSAPLG00000013105	CRNKL1	99	76.912	Anas_platyrhynchos
ENSPMGG00000006263	crnkl1	94	80.510	ENSACAG00000005284	CRNKL1	99	79.502	Anolis_carolinensis
ENSPMGG00000006263	crnkl1	89	79.524	ENSANAG00000024889	CRNKL1	99	79.841	Aotus_nancymaae
ENSPMGG00000006263	crnkl1	96	84.911	ENSACLG00000010813	crnkl1	91	84.402	Astatotilapia_calliptera
ENSPMGG00000006263	crnkl1	94	84.662	ENSAMXG00000018334	crnkl1	93	82.948	Astyanax_mexicanus
ENSPMGG00000006263	crnkl1	96	79.589	ENSBTAG00000008472	CRNKL1	98	79.589	Bos_taurus
ENSPMGG00000006263	crnkl1	90	60.094	WBGene00019762	M03F8.3	93	58.781	Caenorhabditis_elegans
ENSPMGG00000006263	crnkl1	96	79.118	ENSCJAG00000005393	CRNKL1	99	79.118	Callithrix_jacchus
ENSPMGG00000006263	crnkl1	95	79.525	ENSCAFG00000005333	CRNKL1	93	79.912	Canis_familiaris
ENSPMGG00000006263	crnkl1	96	79.676	ENSCAFG00020027488	CRNKL1	99	79.912	Canis_lupus_dingo
ENSPMGG00000006263	crnkl1	96	79.001	ENSCHIG00000013171	CRNKL1	99	78.863	Capra_hircus
ENSPMGG00000006263	crnkl1	96	78.940	ENSTSYG00000004197	CRNKL1	99	79.326	Carlito_syrichta
ENSPMGG00000006263	crnkl1	89	76.835	ENSCAPG00000010501	CRNKL1	99	76.835	Cavia_aperea
ENSPMGG00000006263	crnkl1	96	78.676	ENSCPOG00000004418	CRNKL1	99	79.179	Cavia_porcellus
ENSPMGG00000006263	crnkl1	96	78.824	ENSCCAG00000027037	CRNKL1	99	78.824	Cebus_capucinus
ENSPMGG00000006263	crnkl1	96	78.824	ENSCATG00000034247	CRNKL1	99	78.824	Cercocebus_atys
ENSPMGG00000006263	crnkl1	96	79.087	ENSCLAG00000013859	CRNKL1	99	79.619	Chinchilla_lanigera
ENSPMGG00000006263	crnkl1	96	78.824	ENSCSAG00000011434	CRNKL1	99	78.824	Chlorocebus_sabaeus
ENSPMGG00000006263	crnkl1	95	78.932	ENSCHOG00000006371	CRNKL1	83	79.326	Choloepus_hoffmanni
ENSPMGG00000006263	crnkl1	96	80.294	ENSCPBG00000023501	CRNKL1	99	80.294	Chrysemys_picta_bellii
ENSPMGG00000006263	crnkl1	94	65.663	ENSCING00000002709	-	99	64.464	Ciona_intestinalis
ENSPMGG00000006263	crnkl1	96	78.940	ENSCANG00000038789	CRNKL1	99	78.940	Colobus_angolensis_palliatus
ENSPMGG00000006263	crnkl1	96	79.087	ENSCGRG00001000687	-	98	79.472	Cricetulus_griseus_chok1gshd
ENSPMGG00000006263	crnkl1	96	79.087	ENSCGRG00001001115	-	98	79.472	Cricetulus_griseus_chok1gshd
ENSPMGG00000006263	crnkl1	96	79.087	ENSCGRG00000007854	Crnkl1	98	79.472	Cricetulus_griseus_crigri
ENSPMGG00000006263	crnkl1	97	83.528	ENSCSEG00000005594	crnkl1	99	83.838	Cynoglossus_semilaevis
ENSPMGG00000006263	crnkl1	94	86.078	ENSCVAG00000015172	crnkl1	92	84.818	Cyprinodon_variegatus
ENSPMGG00000006263	crnkl1	94	84.314	ENSDARG00000007901	crnkl1	91	83.309	Danio_rerio
ENSPMGG00000006263	crnkl1	96	79.381	ENSDNOG00000016226	CRNKL1	94	79.619	Dasypus_novemcinctus
ENSPMGG00000006263	crnkl1	96	78.102	ENSDORG00000000394	-	99	78.488	Dipodomys_ordii
ENSPMGG00000006263	crnkl1	94	73.724	ENSDORG00000030174	-	99	74.063	Dipodomys_ordii
ENSPMGG00000006263	crnkl1	94	74.436	ENSDORG00000023724	-	98	74.887	Dipodomys_ordii
ENSPMGG00000006263	crnkl1	95	65.639	FBgn0000377	crn	99	64.317	Drosophila_melanogaster
ENSPMGG00000006263	crnkl1	96	71.281	ENSETEG00000003711	CRNKL1	83	71.935	Echinops_telfairi
ENSPMGG00000006263	crnkl1	95	55.804	ENSEBUG00000013461	crnkl1	95	58.942	Eptatretus_burgeri
ENSPMGG00000006263	crnkl1	97	79.124	ENSEASG00005002072	CRNKL1	99	79.912	Equus_asinus_asinus
ENSPMGG00000006263	crnkl1	97	79.124	ENSECAG00000022215	CRNKL1	99	79.912	Equus_caballus
ENSPMGG00000006263	crnkl1	95	76.855	ENSEEUG00000000413	CRNKL1	91	77.273	Erinaceus_europaeus
ENSPMGG00000006263	crnkl1	94	84.108	ENSELUG00000015424	crnkl1	97	83.016	Esox_lucius
ENSPMGG00000006263	crnkl1	96	79.676	ENSFCAG00000000714	CRNKL1	99	79.912	Felis_catus
ENSPMGG00000006263	crnkl1	94	78.326	ENSFALG00000004611	CRNKL1	99	78.326	Ficedula_albicollis
ENSPMGG00000006263	crnkl1	96	79.234	ENSFDAG00000000604	CRNKL1	99	79.619	Fukomys_damarensis
ENSPMGG00000006263	crnkl1	95	86.519	ENSFHEG00000013163	crnkl1	89	85.924	Fundulus_heteroclitus
ENSPMGG00000006263	crnkl1	95	83.582	ENSGMOG00000007609	crnkl1	95	82.945	Gadus_morhua
ENSPMGG00000006263	crnkl1	96	78.676	ENSGALG00000008429	CRNKL1	99	78.676	Gallus_gallus
ENSPMGG00000006263	crnkl1	95	85.842	ENSGAFG00000014249	crnkl1	90	84.862	Gambusia_affinis
ENSPMGG00000006263	crnkl1	96	83.871	ENSGACG00000011852	crnkl1	91	84.334	Gasterosteus_aculeatus
ENSPMGG00000006263	crnkl1	92	78.671	ENSGAGG00000021233	CRNKL1	99	79.385	Gopherus_agassizii
ENSPMGG00000006263	crnkl1	96	78.971	ENSGGOG00000014176	CRNKL1	99	78.971	Gorilla_gorilla
ENSPMGG00000006263	crnkl1	95	84.889	ENSHBUG00000005246	crnkl1	91	84.402	Haplochromis_burtoni
ENSPMGG00000006263	crnkl1	96	79.234	ENSHGLG00000010856	CRNKL1	99	79.472	Heterocephalus_glaber_female
ENSPMGG00000006263	crnkl1	96	79.234	ENSHGLG00100011521	CRNKL1	99	79.472	Heterocephalus_glaber_male
ENSPMGG00000006263	crnkl1	95	82.687	ENSHCOG00000006420	crnkl1	98	81.618	Hippocampus_comes
ENSPMGG00000006263	crnkl1	91	82.897	ENSIPUG00000006751	crnkl1	94	80.769	Ictalurus_punctatus
ENSPMGG00000006263	crnkl1	89	64.465	ENSIPUG00000000315	-	99	65.984	Ictalurus_punctatus
ENSPMGG00000006263	crnkl1	94	71.041	ENSIPUG00000006836	-	99	70.310	Ictalurus_punctatus
ENSPMGG00000006263	crnkl1	96	79.265	ENSSTOG00000014747	CRNKL1	99	79.765	Ictidomys_tridecemlineatus
ENSPMGG00000006263	crnkl1	96	77.698	ENSJJAG00000016926	Crnkl1	99	77.698	Jaculus_jaculus
ENSPMGG00000006263	crnkl1	97	84.211	ENSKMAG00000003620	crnkl1	89	84.006	Kryptolebias_marmoratus
ENSPMGG00000006263	crnkl1	95	75.422	ENSLBEG00000003543	crnkl1	92	75.038	Labrus_bergylta
ENSPMGG00000006263	crnkl1	96	81.029	ENSLACG00000001129	CRNKL1	99	81.858	Latimeria_chalumnae
ENSPMGG00000006263	crnkl1	94	84.060	ENSLOCG00000016889	crnkl1	95	82.653	Lepisosteus_oculatus
ENSPMGG00000006263	crnkl1	96	79.001	ENSLAFG00000004512	CRNKL1	99	79.736	Loxodonta_africana
ENSPMGG00000006263	crnkl1	96	78.824	ENSMFAG00000039893	CRNKL1	99	78.824	Macaca_fascicularis
ENSPMGG00000006263	crnkl1	96	78.824	ENSMMUG00000007709	CRNKL1	99	78.824	Macaca_mulatta
ENSPMGG00000006263	crnkl1	96	78.824	ENSMNEG00000037490	CRNKL1	99	78.824	Macaca_nemestrina
ENSPMGG00000006263	crnkl1	96	78.824	ENSMLEG00000034885	CRNKL1	99	78.824	Mandrillus_leucophaeus
ENSPMGG00000006263	crnkl1	99	81.946	ENSMAMG00000008757	crnkl1	94	81.946	Mastacembelus_armatus
ENSPMGG00000006263	crnkl1	95	84.889	ENSMZEG00005022345	crnkl1	91	84.402	Maylandia_zebra
ENSPMGG00000006263	crnkl1	96	78.592	ENSMGAG00000003452	CRNKL1	94	78.592	Meleagris_gallopavo
ENSPMGG00000006263	crnkl1	96	79.087	ENSMAUG00000020764	Crnkl1	98	79.472	Mesocricetus_auratus
ENSPMGG00000006263	crnkl1	96	78.940	ENSMICG00000006048	CRNKL1	99	79.179	Microcebus_murinus
ENSPMGG00000006263	crnkl1	93	60.062	ENSMOCG00000004179	-	99	59.199	Microtus_ochrogaster
ENSPMGG00000006263	crnkl1	96	71.780	ENSMOCG00000000681	-	98	72.190	Microtus_ochrogaster
ENSPMGG00000006263	crnkl1	89	82.306	ENSMMOG00000017601	crnkl1	97	82.911	Mola_mola
ENSPMGG00000006263	crnkl1	97	73.983	ENSMODG00000010857	-	99	74.453	Monodelphis_domestica
ENSPMGG00000006263	crnkl1	96	77.358	ENSMODG00000005961	-	98	77.988	Monodelphis_domestica
ENSPMGG00000006263	crnkl1	94	69.865	ENSMALG00000011211	crnkl1	89	74.884	Monopterus_albus
ENSPMGG00000006263	crnkl1	96	79.179	MGP_CAROLIEiJ_G0024394	Crnkl1	99	79.179	Mus_caroli
ENSPMGG00000006263	crnkl1	96	79.381	ENSMUSG00000001767	Crnkl1	98	79.765	Mus_musculus
ENSPMGG00000006263	crnkl1	96	78.792	MGP_PahariEiJ_G0025838	Crnkl1	98	79.179	Mus_pahari
ENSPMGG00000006263	crnkl1	96	79.381	MGP_SPRETEiJ_G0025312	Crnkl1	98	79.765	Mus_spretus
ENSPMGG00000006263	crnkl1	96	79.676	ENSMPUG00000001226	CRNKL1	99	79.912	Mustela_putorius_furo
ENSPMGG00000006263	crnkl1	95	79.852	ENSMLUG00000016513	CRNKL1	88	80.234	Myotis_lucifugus
ENSPMGG00000006263	crnkl1	96	77.633	ENSNGAG00000023097	Crnkl1	99	78.129	Nannospalax_galili
ENSPMGG00000006263	crnkl1	95	85.037	ENSNBRG00000007867	crnkl1	90	84.548	Neolamprologus_brichardi
ENSPMGG00000006263	crnkl1	96	76.706	ENSNLEG00000009862	CRNKL1	99	76.706	Nomascus_leucogenys
ENSPMGG00000006263	crnkl1	96	74.853	ENSMEUG00000002361	-	99	74.853	Notamacropus_eugenii
ENSPMGG00000006263	crnkl1	94	79.398	ENSMEUG00000012167	-	99	80.303	Notamacropus_eugenii
ENSPMGG00000006263	crnkl1	71	55.709	ENSOPRG00000009242	-	61	55.906	Ochotona_princeps
ENSPMGG00000006263	crnkl1	96	78.792	ENSODEG00000012175	CRNKL1	99	79.326	Octodon_degus
ENSPMGG00000006263	crnkl1	95	85.185	ENSONIG00000018728	crnkl1	91	84.840	Oreochromis_niloticus
ENSPMGG00000006263	crnkl1	95	78.287	ENSOCUG00000015484	CRNKL1	83	78.955	Oryctolagus_cuniculus
ENSPMGG00000006263	crnkl1	95	84.627	ENSORLG00000017240	crnkl1	98	79.888	Oryzias_latipes
ENSPMGG00000006263	crnkl1	97	83.431	ENSORLG00020001742	crnkl1	90	84.673	Oryzias_latipes_hni
ENSPMGG00000006263	crnkl1	95	83.976	ENSORLG00015019564	crnkl1	91	83.947	Oryzias_latipes_hsok
ENSPMGG00000006263	crnkl1	97	83.043	ENSOMEG00000019895	crnkl1	90	85.119	Oryzias_melastigma
ENSPMGG00000006263	crnkl1	96	78.824	ENSOGAG00000011544	CRNKL1	99	79.179	Otolemur_garnettii
ENSPMGG00000006263	crnkl1	96	79.734	ENSOARG00000002150	CRNKL1	89	79.883	Ovis_aries
ENSPMGG00000006263	crnkl1	95	78.158	ENSPPAG00000027847	CRNKL1	82	78.900	Pan_paniscus
ENSPMGG00000006263	crnkl1	96	79.676	ENSPPRG00000001955	CRNKL1	99	79.912	Panthera_pardus
ENSPMGG00000006263	crnkl1	96	79.676	ENSPTIG00000007393	CRNKL1	99	79.912	Panthera_tigris_altaica
ENSPMGG00000006263	crnkl1	96	78.971	ENSPTRG00000030609	CRNKL1	99	78.971	Pan_troglodytes
ENSPMGG00000006263	crnkl1	96	78.824	ENSPANG00000017420	CRNKL1	99	78.824	Papio_anubis
ENSPMGG00000006263	crnkl1	94	78.829	ENSPKIG00000017093	crnkl1	88	78.498	Paramormyrops_kingsleyae
ENSPMGG00000006263	crnkl1	96	78.730	ENSPSIG00000012705	CRNKL1	98	79.852	Pelodiscus_sinensis
ENSPMGG00000006263	crnkl1	96	79.381	ENSPEMG00000000073	-	98	79.765	Peromyscus_maniculatus_bairdii
ENSPMGG00000006263	crnkl1	98	76.411	ENSPMAG00000002250	crnkl1	99	77.193	Petromyzon_marinus
ENSPMGG00000006263	crnkl1	96	79.676	ENSPCIG00000025825	CRNKL1	99	76.284	Phascolarctos_cinereus
ENSPMGG00000006263	crnkl1	95	85.246	ENSPFOG00000005102	crnkl1	93	84.840	Poecilia_formosa
ENSPMGG00000006263	crnkl1	95	85.246	ENSPLAG00000007288	crnkl1	89	84.716	Poecilia_latipinna
ENSPMGG00000006263	crnkl1	95	85.395	ENSPMEG00000008865	crnkl1	94	84.035	Poecilia_mexicana
ENSPMGG00000006263	crnkl1	96	89.146	ENSPREG00000012615	crnkl1	91	85.628	Poecilia_reticulata
ENSPMGG00000006263	crnkl1	95	78.783	ENSPPYG00000010747	CRNKL1	80	79.407	Pongo_abelii
ENSPMGG00000006263	crnkl1	95	74.370	ENSPCAG00000003296	CRNKL1	83	76.126	Procavia_capensis
ENSPMGG00000006263	crnkl1	95	78.338	ENSPCOG00000017608	CRNKL1	82	78.739	Propithecus_coquereli
ENSPMGG00000006263	crnkl1	95	79.321	ENSPVAG00000006207	CRNKL1	83	79.472	Pteropus_vampyrus
ENSPMGG00000006263	crnkl1	95	84.741	ENSPNYG00000001977	crnkl1	91	84.257	Pundamilia_nyererei
ENSPMGG00000006263	crnkl1	94	84.408	ENSPNAG00000001507	crnkl1	96	82.063	Pygocentrus_nattereri
ENSPMGG00000006263	crnkl1	96	79.381	ENSRNOG00000010587	Crnkl1	98	79.765	Rattus_norvegicus
ENSPMGG00000006263	crnkl1	96	79.087	ENSRNOG00000040045	Crnkl1	98	79.472	Rattus_norvegicus
ENSPMGG00000006263	crnkl1	96	78.824	ENSRBIG00000031770	CRNKL1	99	78.824	Rhinopithecus_bieti
ENSPMGG00000006263	crnkl1	96	78.676	ENSRROG00000040450	CRNKL1	99	78.676	Rhinopithecus_roxellana
ENSPMGG00000006263	crnkl1	92	35.456	YLR117C	CLF1	99	35.549	Saccharomyces_cerevisiae
ENSPMGG00000006263	crnkl1	96	78.971	ENSSBOG00000029672	CRNKL1	99	78.971	Saimiri_boliviensis_boliviensis
ENSPMGG00000006263	crnkl1	93	66.058	ENSSHAG00000011199	CRNKL1	99	66.362	Sarcophilus_harrisii
ENSPMGG00000006263	crnkl1	94	83.861	ENSSFOG00015000946	crnkl1	89	82.647	Scleropages_formosus
ENSPMGG00000006263	crnkl1	96	83.480	ENSSMAG00000007933	crnkl1	91	82.219	Scophthalmus_maximus
ENSPMGG00000006263	crnkl1	97	76.081	ENSSDUG00000012625	crnkl1	89	76.081	Seriola_dumerili
ENSPMGG00000006263	crnkl1	97	83.671	ENSSLDG00000021413	crnkl1	88	84.875	Seriola_lalandi_dorsalis
ENSPMGG00000006263	crnkl1	96	78.792	ENSSARG00000006443	CRNKL1	81	79.032	Sorex_araneus
ENSPMGG00000006263	crnkl1	96	79.148	ENSSPUG00000005254	CRNKL1	99	79.155	Sphenodon_punctatus
ENSPMGG00000006263	crnkl1	99	81.704	ENSSPAG00000016150	crnkl1	93	81.704	Stegastes_partitus
ENSPMGG00000006263	crnkl1	96	79.589	ENSSSCG00000038587	CRNKL1	99	79.536	Sus_scrofa
ENSPMGG00000006263	crnkl1	96	78.540	ENSTGUG00000007645	CRNKL1	98	78.540	Taeniopygia_guttata
ENSPMGG00000006263	crnkl1	97	82.396	ENSTRUG00000015417	crnkl1	98	79.692	Takifugu_rubripes
ENSPMGG00000006263	crnkl1	95	82.861	ENSTNIG00000010710	crnkl1	99	82.085	Tetraodon_nigroviridis
ENSPMGG00000006263	crnkl1	88	78.240	ENSTBEG00000001304	CRNKL1	82	78.730	Tupaia_belangeri
ENSPMGG00000006263	crnkl1	88	76.480	ENSTTRG00000000484	CRNKL1	81	76.984	Tursiops_truncatus
ENSPMGG00000006263	crnkl1	96	79.676	ENSUAMG00000018586	CRNKL1	99	79.912	Ursus_americanus
ENSPMGG00000006263	crnkl1	96	79.676	ENSUMAG00000024957	CRNKL1	99	79.912	Ursus_maritimus
ENSPMGG00000006263	crnkl1	95	79.525	ENSVVUG00000012559	CRNKL1	81	79.912	Vulpes_vulpes
ENSPMGG00000006263	crnkl1	97	79.215	ENSXETG00000009698	crnkl1	99	80.263	Xenopus_tropicalis
ENSPMGG00000006263	crnkl1	95	84.673	ENSXCOG00000000824	crnkl1	92	83.647	Xiphophorus_couchianus
ENSPMGG00000006263	crnkl1	95	85.693	ENSXMAG00000006896	crnkl1	92	84.638	Xiphophorus_maculatus