EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMGG00000006497 (Gene tree)
Gene ID: -
Gene Symbol: tarbp2
Alias: -
Full Name: TAR (HIV) RNA binding protein 2
Gene Type: protein_coding
Species: Periophthalmus_magnuspinnatus
Status: putative
Strand: Plus strand
Length: 4191 bases
Position: chrKN465483.1:175103-179293
Accession: ZDB-GENE-030131-8085
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMGP00000007837	dsrm	PF00035.26	8.5e-36	1	2
ENSPMGP00000007837	dsrm	PF00035.26	8.5e-36	2	2
ENSPMGP00000007844	dsrm	PF00035.26	9.3e-36	1	2
ENSPMGP00000007844	dsrm	PF00035.26	9.3e-36	2	2
ENSPMGP00000007837	DND1_DSRM	PF14709.7	1.4e-13	1	1
ENSPMGP00000007844	DND1_DSRM	PF14709.7	1.7e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMGT00000008343	-	1032	-	ENSPMGP00000007837	343 (aa)	-	-
ENSPMGT00000008350	-	1038	-	ENSPMGP00000007844	345 (aa)	-	-

Gene Model

Click here to download ENSPMGG00000006497's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMGG00000006497's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMGG00000006497	tarbp2	99	65.289	ENSG00000139546	TARBP2	88	92.208	Homo_sapiens
ENSPMGG00000006497	tarbp2	100	91.884	ENSAPOG00000019892	tarbp2	100	91.884	Acanthochromis_polyacanthus
ENSPMGG00000006497	tarbp2	99	65.014	ENSAMEG00000012601	TARBP2	99	65.840	Ailuropoda_melanoleuca
ENSPMGG00000006497	tarbp2	100	89.565	ENSACIG00000016780	tarbp2	100	89.565	Amphilophus_citrinellus
ENSPMGG00000006497	tarbp2	100	91.594	ENSAOCG00000005201	tarbp2	100	91.594	Amphiprion_ocellaris
ENSPMGG00000006497	tarbp2	100	91.594	ENSAPEG00000008376	tarbp2	100	91.594	Amphiprion_percula
ENSPMGG00000006497	tarbp2	100	91.304	ENSATEG00000025012	tarbp2	100	91.304	Anabas_testudineus
ENSPMGG00000006497	tarbp2	96	69.828	ENSACAG00000001100	TARBP2	96	69.828	Anolis_carolinensis
ENSPMGG00000006497	tarbp2	100	65.574	ENSANAG00000034453	TARBP2	94	75.676	Aotus_nancymaae
ENSPMGG00000006497	tarbp2	97	88.358	ENSACLG00000018569	tarbp2	97	88.358	Astatotilapia_calliptera
ENSPMGG00000006497	tarbp2	100	81.073	ENSAMXG00000016665	tarbp2	100	83.815	Astyanax_mexicanus
ENSPMGG00000006497	tarbp2	100	66.393	ENSBTAG00000000435	TARBP2	99	66.942	Bos_taurus
ENSPMGG00000006497	tarbp2	99	65.289	ENSCJAG00000018668	TARBP2	99	66.116	Callithrix_jacchus
ENSPMGG00000006497	tarbp2	100	68.012	ENSCAFG00000006874	TARBP2	100	68.012	Canis_familiaris
ENSPMGG00000006497	tarbp2	99	65.565	ENSCAFG00020020735	TARBP2	100	67.536	Canis_lupus_dingo
ENSPMGG00000006497	tarbp2	96	66.854	ENSCHIG00000026017	TARBP2	99	65.395	Capra_hircus
ENSPMGG00000006497	tarbp2	99	65.565	ENSTSYG00000035683	TARBP2	94	75.676	Carlito_syrichta
ENSPMGG00000006497	tarbp2	65	69.778	ENSCAPG00000008981	TARBP2	100	69.778	Cavia_aperea
ENSPMGG00000006497	tarbp2	100	66.393	ENSCPOG00000001009	TARBP2	99	66.116	Cavia_porcellus
ENSPMGG00000006497	tarbp2	99	65.565	ENSCCAG00000033025	TARBP2	91	92.453	Cebus_capucinus
ENSPMGG00000006497	tarbp2	100	64.754	ENSCATG00000026344	TARBP2	94	75.676	Cercocebus_atys
ENSPMGG00000006497	tarbp2	100	65.847	ENSCLAG00000009175	TARBP2	99	65.840	Chinchilla_lanigera
ENSPMGG00000006497	tarbp2	100	64.754	ENSCSAG00000005479	TARBP2	99	65.565	Chlorocebus_sabaeus
ENSPMGG00000006497	tarbp2	100	68.421	ENSCPBG00000000654	TARBP2	100	70.588	Chrysemys_picta_bellii
ENSPMGG00000006497	tarbp2	100	65.027	ENSCANG00000040415	TARBP2	91	90.566	Colobus_angolensis_palliatus
ENSPMGG00000006497	tarbp2	99	65.193	ENSCGRG00001011856	TARBP2	99	66.022	Cricetulus_griseus_chok1gshd
ENSPMGG00000006497	tarbp2	99	65.193	ENSCGRG00000009088	TARBP2	100	67.901	Cricetulus_griseus_crigri
ENSPMGG00000006497	tarbp2	100	88.406	ENSCSEG00000010631	tarbp2	100	88.406	Cynoglossus_semilaevis
ENSPMGG00000006497	tarbp2	100	88.406	ENSCVAG00000009832	tarbp2	100	88.406	Cyprinodon_variegatus
ENSPMGG00000006497	tarbp2	100	81.034	ENSDARG00000070471	tarbp2	100	81.609	Danio_rerio
ENSPMGG00000006497	tarbp2	99	66.116	ENSDNOG00000002144	TARBP2	99	66.667	Dasypus_novemcinctus
ENSPMGG00000006497	tarbp2	78	58.929	ENSDORG00000001390	Tarbp2	92	69.507	Dipodomys_ordii
ENSPMGG00000006497	tarbp2	86	83.158	ENSETEG00000002458	TARBP2	81	83.158	Echinops_telfairi
ENSPMGG00000006497	tarbp2	95	59.021	ENSEBUG00000002377	tarbp2	98	59.939	Eptatretus_burgeri
ENSPMGG00000006497	tarbp2	99	65.840	ENSEASG00005010030	TARBP2	99	66.942	Equus_asinus_asinus
ENSPMGG00000006497	tarbp2	99	68.391	ENSECAG00000011695	TARBP2	94	75.676	Equus_caballus
ENSPMGG00000006497	tarbp2	83	62.783	ENSEEUG00000001128	-	98	62.783	Erinaceus_europaeus
ENSPMGG00000006497	tarbp2	100	84.195	ENSELUG00000010642	tarbp2	100	86.207	Esox_lucius
ENSPMGG00000006497	tarbp2	99	65.840	ENSFCAG00000007757	TARBP2	99	66.391	Felis_catus
ENSPMGG00000006497	tarbp2	99	65.840	ENSFDAG00000011932	TARBP2	100	68.443	Fukomys_damarensis
ENSPMGG00000006497	tarbp2	94	89.198	ENSFHEG00000016118	tarbp2	100	89.198	Fundulus_heteroclitus
ENSPMGG00000006497	tarbp2	100	85.879	ENSGMOG00000001290	tarbp2	100	85.879	Gadus_morhua
ENSPMGG00000006497	tarbp2	66	69.163	ENSGALG00000038939	-	84	69.820	Gallus_gallus
ENSPMGG00000006497	tarbp2	100	88.986	ENSGAFG00000013341	tarbp2	100	88.986	Gambusia_affinis
ENSPMGG00000006497	tarbp2	100	86.761	ENSGACG00000006645	tarbp2	100	87.042	Gasterosteus_aculeatus
ENSPMGG00000006497	tarbp2	100	68.698	ENSGAGG00000021169	TARBP2	100	68.698	Gopherus_agassizii
ENSPMGG00000006497	tarbp2	99	65.289	ENSGGOG00000012637	TARBP2	90	78.873	Gorilla_gorilla
ENSPMGG00000006497	tarbp2	100	89.855	ENSHBUG00000018639	tarbp2	100	89.855	Haplochromis_burtoni
ENSPMGG00000006497	tarbp2	99	65.840	ENSHGLG00000001284	TARBP2	99	66.116	Heterocephalus_glaber_female
ENSPMGG00000006497	tarbp2	99	65.840	ENSHGLG00100011274	TARBP2	99	66.116	Heterocephalus_glaber_male
ENSPMGG00000006497	tarbp2	100	86.087	ENSHCOG00000001027	tarbp2	100	86.087	Hippocampus_comes
ENSPMGG00000006497	tarbp2	100	81.089	ENSIPUG00000023701	tarbp2	100	81.375	Ictalurus_punctatus
ENSPMGG00000006497	tarbp2	99	66.116	ENSSTOG00000003678	TARBP2	100	68.033	Ictidomys_tridecemlineatus
ENSPMGG00000006497	tarbp2	100	91.884	ENSKMAG00000012142	tarbp2	100	91.884	Kryptolebias_marmoratus
ENSPMGG00000006497	tarbp2	100	87.853	ENSLBEG00000015027	tarbp2	100	87.853	Labrus_bergylta
ENSPMGG00000006497	tarbp2	95	65.138	ENSLACG00000007087	TARBP2	95	65.868	Latimeria_chalumnae
ENSPMGG00000006497	tarbp2	100	80.460	ENSLOCG00000005711	tarbp2	100	80.460	Lepisosteus_oculatus
ENSPMGG00000006497	tarbp2	75	61.957	ENSLAFG00000002620	TARBP2	98	61.232	Loxodonta_africana
ENSPMGG00000006497	tarbp2	100	64.754	ENSMFAG00000013567	TARBP2	94	75.676	Macaca_fascicularis
ENSPMGG00000006497	tarbp2	100	65.027	ENSMMUG00000018492	TARBP2	99	65.840	Macaca_mulatta
ENSPMGG00000006497	tarbp2	100	64.754	ENSMNEG00000036477	TARBP2	94	75.676	Macaca_nemestrina
ENSPMGG00000006497	tarbp2	100	64.754	ENSMLEG00000029583	TARBP2	94	75.676	Mandrillus_leucophaeus
ENSPMGG00000006497	tarbp2	95	87.462	ENSMAMG00000010272	tarbp2	97	86.842	Mastacembelus_armatus
ENSPMGG00000006497	tarbp2	100	90.145	ENSMZEG00005006895	tarbp2	100	90.145	Maylandia_zebra
ENSPMGG00000006497	tarbp2	99	64.917	ENSMAUG00000019805	Tarbp2	99	65.205	Mesocricetus_auratus
ENSPMGG00000006497	tarbp2	94	68.116	ENSMICG00000027441	TARBP2	94	75.676	Microcebus_murinus
ENSPMGG00000006497	tarbp2	99	66.022	ENSMOCG00000003691	Tarbp2	99	66.022	Microtus_ochrogaster
ENSPMGG00000006497	tarbp2	94	86.970	ENSMMOG00000010374	tarbp2	100	86.970	Mola_mola
ENSPMGG00000006497	tarbp2	100	89.855	ENSMALG00000009773	tarbp2	100	89.855	Monopterus_albus
ENSPMGG00000006497	tarbp2	99	64.917	MGP_CAROLIEiJ_G0020356	Tarbp2	91	92.453	Mus_caroli
ENSPMGG00000006497	tarbp2	99	64.917	ENSMUSG00000023051	Tarbp2	91	92.453	Mus_musculus
ENSPMGG00000006497	tarbp2	99	64.641	MGP_PahariEiJ_G0020355	Tarbp2	91	92.453	Mus_pahari
ENSPMGG00000006497	tarbp2	99	64.917	MGP_SPRETEiJ_G0021249	Tarbp2	91	92.453	Mus_spretus
ENSPMGG00000006497	tarbp2	99	66.851	ENSMPUG00000005944	TARBP2	99	66.851	Mustela_putorius_furo
ENSPMGG00000006497	tarbp2	99	65.840	ENSMLUG00000010035	TARBP2	99	66.942	Myotis_lucifugus
ENSPMGG00000006497	tarbp2	57	86.813	ENSNBRG00000011845	-	84	92.045	Neolamprologus_brichardi
ENSPMGG00000006497	tarbp2	99	65.289	ENSNLEG00000017690	TARBP2	94	75.676	Nomascus_leucogenys
ENSPMGG00000006497	tarbp2	96	71.687	ENSMEUG00000001916	TARBP2	96	71.687	Notamacropus_eugenii
ENSPMGG00000006497	tarbp2	65	71.556	ENSOPRG00000011397	TARBP2	100	71.556	Ochotona_princeps
ENSPMGG00000006497	tarbp2	60	70.354	ENSODEG00000013413	TARBP2	100	70.354	Octodon_degus
ENSPMGG00000006497	tarbp2	95	85.632	ENSONIG00000005115	tarbp2	96	85.632	Oreochromis_niloticus
ENSPMGG00000006497	tarbp2	98	67.409	ENSOCUG00000005700	TARBP2	98	67.409	Oryctolagus_cuniculus
ENSPMGG00000006497	tarbp2	100	87.536	ENSORLG00000005209	tarbp2	100	87.536	Oryzias_latipes
ENSPMGG00000006497	tarbp2	100	87.536	ENSORLG00020017755	tarbp2	100	87.536	Oryzias_latipes_hni
ENSPMGG00000006497	tarbp2	100	87.536	ENSORLG00015013237	tarbp2	100	87.536	Oryzias_latipes_hsok
ENSPMGG00000006497	tarbp2	100	88.406	ENSOMEG00000018860	tarbp2	100	88.406	Oryzias_melastigma
ENSPMGG00000006497	tarbp2	99	65.289	ENSOGAG00000001744	TARBP2	99	66.391	Otolemur_garnettii
ENSPMGG00000006497	tarbp2	99	65.840	ENSOARG00000016437	TARBP2	99	66.667	Ovis_aries
ENSPMGG00000006497	tarbp2	99	65.289	ENSPPAG00000030429	TARBP2	94	75.676	Pan_paniscus
ENSPMGG00000006497	tarbp2	99	65.565	ENSPPRG00000000189	TARBP2	99	66.116	Panthera_pardus
ENSPMGG00000006497	tarbp2	100	67.039	ENSPTIG00000007859	TARBP2	99	67.514	Panthera_tigris_altaica
ENSPMGG00000006497	tarbp2	99	65.289	ENSPTRG00000005020	TARBP2	94	75.676	Pan_troglodytes
ENSPMGG00000006497	tarbp2	100	64.754	ENSPANG00000010689	TARBP2	94	75.676	Papio_anubis
ENSPMGG00000006497	tarbp2	100	79.775	ENSPKIG00000002455	tarbp2	100	79.775	Paramormyrops_kingsleyae
ENSPMGG00000006497	tarbp2	99	65.470	ENSPEMG00000014285	Tarbp2	99	65.470	Peromyscus_maniculatus_bairdii
ENSPMGG00000006497	tarbp2	92	63.438	ENSPMAG00000000105	tarbp2	99	63.438	Petromyzon_marinus
ENSPMGG00000006497	tarbp2	96	71.988	ENSPCIG00000006672	TARBP2	89	71.988	Phascolarctos_cinereus
ENSPMGG00000006497	tarbp2	100	89.855	ENSPFOG00000007586	tarbp2	100	89.855	Poecilia_formosa
ENSPMGG00000006497	tarbp2	100	89.565	ENSPLAG00000017659	tarbp2	100	89.565	Poecilia_latipinna
ENSPMGG00000006497	tarbp2	100	89.855	ENSPMEG00000007775	tarbp2	100	89.855	Poecilia_mexicana
ENSPMGG00000006497	tarbp2	100	88.986	ENSPREG00000007815	tarbp2	100	88.986	Poecilia_reticulata
ENSPMGG00000006497	tarbp2	97	66.272	ENSPPYG00000004583	TARBP2	97	66.765	Pongo_abelii
ENSPMGG00000006497	tarbp2	78	63.574	ENSPCAG00000005352	TARBP2	63	69.869	Procavia_capensis
ENSPMGG00000006497	tarbp2	99	65.289	ENSPCOG00000013102	TARBP2	94	75.676	Propithecus_coquereli
ENSPMGG00000006497	tarbp2	99	65.565	ENSPVAG00000012286	TARBP2	99	65.565	Pteropus_vampyrus
ENSPMGG00000006497	tarbp2	100	89.855	ENSPNYG00000014125	tarbp2	100	89.855	Pundamilia_nyererei
ENSPMGG00000006497	tarbp2	100	84.104	ENSPNAG00000011128	tarbp2	100	84.682	Pygocentrus_nattereri
ENSPMGG00000006497	tarbp2	99	64.088	ENSRNOG00000042355	Tarbp2	99	64.641	Rattus_norvegicus
ENSPMGG00000006497	tarbp2	100	65.027	ENSRBIG00000027150	TARBP2	94	75.676	Rhinopithecus_bieti
ENSPMGG00000006497	tarbp2	100	65.027	ENSRROG00000044783	TARBP2	94	75.676	Rhinopithecus_roxellana
ENSPMGG00000006497	tarbp2	100	65.574	ENSSBOG00000027305	TARBP2	94	75.676	Saimiri_boliviensis_boliviensis
ENSPMGG00000006497	tarbp2	94	72.136	ENSSHAG00000007064	TARBP2	100	72.136	Sarcophilus_harrisii
ENSPMGG00000006497	tarbp2	100	78.771	ENSSFOG00015010784	tarbp2	100	78.771	Scleropages_formosus
ENSPMGG00000006497	tarbp2	100	88.889	ENSSMAG00000012769	tarbp2	100	88.889	Scophthalmus_maximus
ENSPMGG00000006497	tarbp2	100	91.594	ENSSDUG00000018818	tarbp2	100	91.594	Seriola_dumerili
ENSPMGG00000006497	tarbp2	100	91.304	ENSSLDG00000001835	tarbp2	100	91.304	Seriola_lalandi_dorsalis
ENSPMGG00000006497	tarbp2	76	67.164	ENSSARG00000001010	TARBP2	73	67.164	Sorex_araneus
ENSPMGG00000006497	tarbp2	95	53.333	ENSSPUG00000005895	TARBP2	94	53.453	Sphenodon_punctatus
ENSPMGG00000006497	tarbp2	100	91.884	ENSSPAG00000022797	tarbp2	100	91.884	Stegastes_partitus
ENSPMGG00000006497	tarbp2	99	66.667	ENSSSCG00000000276	TARBP2	100	68.406	Sus_scrofa
ENSPMGG00000006497	tarbp2	71	56.420	ENSTGUG00000017031	TARBP2	100	56.420	Taeniopygia_guttata
ENSPMGG00000006497	tarbp2	100	89.565	ENSTRUG00000014379	tarbp2	100	89.565	Takifugu_rubripes
ENSPMGG00000006497	tarbp2	100	89.565	ENSTNIG00000007065	tarbp2	100	89.565	Tetraodon_nigroviridis
ENSPMGG00000006497	tarbp2	50	68.208	ENSTBEG00000012751	-	55	68.208	Tupaia_belangeri
ENSPMGG00000006497	tarbp2	100	66.393	ENSTTRG00000017177	TARBP2	99	66.667	Tursiops_truncatus
ENSPMGG00000006497	tarbp2	99	65.565	ENSUAMG00000009011	TARBP2	99	66.391	Ursus_americanus
ENSPMGG00000006497	tarbp2	99	65.289	ENSUMAG00000010461	TARBP2	99	66.116	Ursus_maritimus
ENSPMGG00000006497	tarbp2	99	65.565	ENSVVUG00000028150	TARBP2	100	67.536	Vulpes_vulpes
ENSPMGG00000006497	tarbp2	97	69.653	ENSXETG00000012644	tarbp2	97	69.653	Xenopus_tropicalis
ENSPMGG00000006497	tarbp2	100	90.435	ENSXMAG00000017836	tarbp2	100	90.435	Xiphophorus_maculatus