EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMGG00000006534 (Gene tree)
Gene ID: -
Gene Symbol: cstf2
Alias: -
Full Name: cleavage stimulation factor%2C 3' pre-RNA%2C subunit 2
Gene Type: protein_coding
Species: Periophthalmus_magnuspinnatus
Status: putative
Strand: Minus strand
Length: 4970 bases
Position: chrKN463867.1:607121-612090
Accession: ZDB-GENE-031118-2
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMGP00000007874	RRM_1	PF00076.22	1e-24	1	1
ENSPMGP00000007873	RRM_1	PF00076.22	1.1e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMGT00000008381	-	1545	-	ENSPMGP00000007873	514 (aa)	-	-
ENSPMGT00000008382	-	1449	-	ENSPMGP00000007874	482 (aa)	-	-

Gene Model

Click here to download ENSPMGG00000006534's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMGG00000006534's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMGG00000006534	cstf2	97	58.814	ENSG00000101811	CSTF2	81	92.308	Homo_sapiens
ENSPMGG00000006534	cstf2	100	89.858	ENSAPOG00000005630	cstf2	100	89.858	Acanthochromis_polyacanthus
ENSPMGG00000006534	cstf2	97	58.442	ENSAMEG00000002082	CSTF2	84	81.743	Ailuropoda_melanoleuca
ENSPMGG00000006534	cstf2	96	86.966	ENSACIG00000012852	cstf2	96	87.393	Amphilophus_citrinellus
ENSPMGG00000006534	cstf2	100	90.631	ENSAOCG00000020905	cstf2	100	90.631	Amphiprion_ocellaris
ENSPMGG00000006534	cstf2	100	90.835	ENSAPEG00000006526	cstf2	100	90.835	Amphiprion_percula
ENSPMGG00000006534	cstf2	96	87.002	ENSATEG00000018186	cstf2	96	86.792	Anabas_testudineus
ENSPMGG00000006534	cstf2	94	59.933	ENSAPLG00000007255	CSTF2	83	83.613	Anas_platyrhynchos
ENSPMGG00000006534	cstf2	97	73.958	ENSANAG00000022342	CSTF2	87	81.743	Aotus_nancymaae
ENSPMGG00000006534	cstf2	100	87.424	ENSACLG00000000779	cstf2	93	88.584	Astatotilapia_calliptera
ENSPMGG00000006534	cstf2	90	90.830	ENSAMXG00000021477	cstf2	96	100.000	Astyanax_mexicanus
ENSPMGG00000006534	cstf2	97	59.966	ENSBTAG00000003547	CSTF2	84	81.328	Bos_taurus
ENSPMGG00000006534	cstf2	97	59.302	ENSCJAG00000004422	CSTF2	99	58.153	Callithrix_jacchus
ENSPMGG00000006534	cstf2	97	58.784	ENSCAFG00000017551	CSTF2	99	58.108	Canis_familiaris
ENSPMGG00000006534	cstf2	97	59.083	ENSCAFG00020007619	CSTF2	84	81.743	Canis_lupus_dingo
ENSPMGG00000006534	cstf2	97	59.794	ENSCHIG00000016994	CSTF2	84	81.328	Capra_hircus
ENSPMGG00000006534	cstf2	97	58.983	ENSTSYG00000006529	CSTF2	99	58.054	Carlito_syrichta
ENSPMGG00000006534	cstf2	97	59.725	ENSCPOG00000015255	CSTF2	84	92.810	Cavia_porcellus
ENSPMGG00000006534	cstf2	97	58.854	ENSCCAG00000032975	CSTF2	99	58.392	Cebus_capucinus
ENSPMGG00000006534	cstf2	97	60.213	ENSCATG00000022835	CSTF2	99	58.392	Cercocebus_atys
ENSPMGG00000006534	cstf2	97	59.725	ENSCLAG00000001904	CSTF2	85	91.026	Chinchilla_lanigera
ENSPMGG00000006534	cstf2	97	58.756	ENSCSAG00000010360	CSTF2	99	58.054	Chlorocebus_sabaeus
ENSPMGG00000006534	cstf2	97	67.898	ENSCPBG00000014293	CSTF2	93	66.370	Chrysemys_picta_bellii
ENSPMGG00000006534	cstf2	97	59.441	ENSCANG00000030612	CSTF2	99	58.392	Colobus_angolensis_palliatus
ENSPMGG00000006534	cstf2	96	58.874	ENSCGRG00001023023	Cstf2	99	61.951	Cricetulus_griseus_chok1gshd
ENSPMGG00000006534	cstf2	96	60.035	ENSCGRG00000003897	Cstf2	99	60.036	Cricetulus_griseus_crigri
ENSPMGG00000006534	cstf2	96	86.316	ENSCVAG00000005731	cstf2	96	85.474	Cyprinodon_variegatus
ENSPMGG00000006534	cstf2	77	100.000	ENSDARG00000090788	cstf2	94	100.000	Danio_rerio
ENSPMGG00000006534	cstf2	97	60.000	ENSDORG00000007195	Cstf2	83	93.377	Dipodomys_ordii
ENSPMGG00000006534	cstf2	75	82.759	ENSETEG00000004931	CSTF2	64	82.759	Echinops_telfairi
ENSPMGG00000006534	cstf2	97	57.351	ENSEASG00005001216	CSTF2	84	82.158	Equus_asinus_asinus
ENSPMGG00000006534	cstf2	97	58.081	ENSECAG00000009325	CSTF2	84	82.158	Equus_caballus
ENSPMGG00000006534	cstf2	97	58.920	ENSFCAG00000007000	CSTF2	84	81.743	Felis_catus
ENSPMGG00000006534	cstf2	89	56.552	ENSFALG00000003859	CSTF2	84	82.381	Ficedula_albicollis
ENSPMGG00000006534	cstf2	97	73.958	ENSFDAG00000002416	CSTF2	87	81.743	Fukomys_damarensis
ENSPMGG00000006534	cstf2	96	82.031	ENSFHEG00000017065	cstf2	93	82.192	Fundulus_heteroclitus
ENSPMGG00000006534	cstf2	95	77.991	ENSGMOG00000005145	cstf2	99	78.936	Gadus_morhua
ENSPMGG00000006534	cstf2	97	61.340	ENSGALG00000006760	CSTF2	99	63.294	Gallus_gallus
ENSPMGG00000006534	cstf2	96	84.792	ENSGAFG00000020027	cstf2	96	84.792	Gambusia_affinis
ENSPMGG00000006534	cstf2	97	79.344	ENSGACG00000017326	cstf2	98	79.884	Gasterosteus_aculeatus
ENSPMGG00000006534	cstf2	97	58.374	ENSGAGG00000006037	CSTF2	88	84.337	Gopherus_agassizii
ENSPMGG00000006534	cstf2	97	59.441	ENSGGOG00000022267	CSTF2	99	58.392	Gorilla_gorilla
ENSPMGG00000006534	cstf2	100	87.475	ENSHBUG00000016183	cstf2	93	88.632	Haplochromis_burtoni
ENSPMGG00000006534	cstf2	96	50.856	ENSHGLG00000013455	-	86	68.880	Heterocephalus_glaber_female
ENSPMGG00000006534	cstf2	97	58.475	ENSHGLG00000000659	-	86	89.506	Heterocephalus_glaber_female
ENSPMGG00000006534	cstf2	97	58.475	ENSHGLG00100001130	-	86	89.506	Heterocephalus_glaber_male
ENSPMGG00000006534	cstf2	96	51.027	ENSHGLG00100015391	-	86	69.295	Heterocephalus_glaber_male
ENSPMGG00000006534	cstf2	96	85.443	ENSHCOG00000005157	cstf2	97	85.021	Hippocampus_comes
ENSPMGG00000006534	cstf2	98	72.106	ENSIPUG00000017839	cstf2	97	67.921	Ictalurus_punctatus
ENSPMGG00000006534	cstf2	97	59.284	ENSSTOG00000023445	CSTF2	85	91.026	Ictidomys_tridecemlineatus
ENSPMGG00000006534	cstf2	96	58.615	ENSJJAG00000020507	Cstf2	85	91.026	Jaculus_jaculus
ENSPMGG00000006534	cstf2	100	84.770	ENSKMAG00000001068	cstf2	96	86.639	Kryptolebias_marmoratus
ENSPMGG00000006534	cstf2	69	96.203	ENSLBEG00000028720	cstf2	100	96.203	Labrus_bergylta
ENSPMGG00000006534	cstf2	97	61.307	ENSLACG00000015927	CSTF2	85	87.917	Latimeria_chalumnae
ENSPMGG00000006534	cstf2	98	86.885	ENSLOCG00000015300	cstf2	80	86.885	Lepisosteus_oculatus
ENSPMGG00000006534	cstf2	97	58.864	ENSLAFG00000000474	CSTF2	87	82.988	Loxodonta_africana
ENSPMGG00000006534	cstf2	97	59.441	ENSMFAG00000043888	CSTF2	99	58.392	Macaca_fascicularis
ENSPMGG00000006534	cstf2	97	59.441	ENSMMUG00000013008	CSTF2	99	58.392	Macaca_mulatta
ENSPMGG00000006534	cstf2	97	59.441	ENSMNEG00000041824	CSTF2	99	58.392	Macaca_nemestrina
ENSPMGG00000006534	cstf2	97	59.441	ENSMLEG00000036870	CSTF2	99	58.392	Mandrillus_leucophaeus
ENSPMGG00000006534	cstf2	94	89.783	ENSMAMG00000020364	cstf2	96	89.783	Mastacembelus_armatus
ENSPMGG00000006534	cstf2	100	87.424	ENSMZEG00005007200	cstf2	96	88.584	Maylandia_zebra
ENSPMGG00000006534	cstf2	89	82.759	ENSMGAG00000004139	CSTF2	85	82.759	Meleagris_gallopavo
ENSPMGG00000006534	cstf2	96	58.020	ENSMAUG00000000965	Cstf2	99	59.856	Mesocricetus_auratus
ENSPMGG00000006534	cstf2	97	59.520	ENSMICG00000014121	CSTF2	87	83.402	Microcebus_murinus
ENSPMGG00000006534	cstf2	96	57.993	ENSMOCG00000008081	Cstf2	99	57.479	Microtus_ochrogaster
ENSPMGG00000006534	cstf2	96	79.870	ENSMMOG00000000538	cstf2	96	80.519	Mola_mola
ENSPMGG00000006534	cstf2	97	60.461	ENSMODG00000011785	CSTF2	99	61.474	Monodelphis_domestica
ENSPMGG00000006534	cstf2	96	74.386	MGP_CAROLIEiJ_G0033383	Cstf2	84	92.258	Mus_caroli
ENSPMGG00000006534	cstf2	96	59.043	ENSMUSG00000031256	Cstf2	84	92.258	Mus_musculus
ENSPMGG00000006534	cstf2	96	74.386	MGP_PahariEiJ_G0031923	Cstf2	80	82.988	Mus_pahari
ENSPMGG00000006534	cstf2	96	74.737	MGP_SPRETEiJ_G0034548	Cstf2	84	92.258	Mus_spretus
ENSPMGG00000006534	cstf2	97	56.056	ENSMPUG00000002339	CSTF2	80	81.743	Mustela_putorius_furo
ENSPMGG00000006534	cstf2	97	57.588	ENSMLUG00000004598	CSTF2	78	82.158	Myotis_lucifugus
ENSPMGG00000006534	cstf2	96	59.316	ENSNGAG00000021985	Cstf2	99	58.537	Nannospalax_galili
ENSPMGG00000006534	cstf2	92	80.828	ENSNBRG00000021694	cstf2	100	82.809	Neolamprologus_brichardi
ENSPMGG00000006534	cstf2	97	59.441	ENSNLEG00000007510	CSTF2	87	81.743	Nomascus_leucogenys
ENSPMGG00000006534	cstf2	87	58.984	ENSMEUG00000014025	-	100	57.815	Notamacropus_eugenii
ENSPMGG00000006534	cstf2	97	59.507	ENSMEUG00000007875	-	99	59.208	Notamacropus_eugenii
ENSPMGG00000006534	cstf2	97	62.081	ENSMEUG00000011186	-	99	60.929	Notamacropus_eugenii
ENSPMGG00000006534	cstf2	87	71.233	ENSOPRG00000003106	CSTF2	81	76.804	Ochotona_princeps
ENSPMGG00000006534	cstf2	97	59.552	ENSODEG00000002059	CSTF2	99	59.169	Octodon_degus
ENSPMGG00000006534	cstf2	79	93.469	ENSONIG00000002631	cstf2	79	77.465	Oreochromis_niloticus
ENSPMGG00000006534	cstf2	85	80.769	ENSOANG00000004208	CSTF2	72	82.759	Ornithorhynchus_anatinus
ENSPMGG00000006534	cstf2	97	58.744	ENSOCUG00000010468	CSTF2	99	59.804	Oryctolagus_cuniculus
ENSPMGG00000006534	cstf2	96	85.714	ENSORLG00000001380	cstf2	96	84.664	Oryzias_latipes
ENSPMGG00000006534	cstf2	96	85.924	ENSORLG00020021917	cstf2	96	84.874	Oryzias_latipes_hni
ENSPMGG00000006534	cstf2	96	85.924	ENSORLG00015011996	cstf2	96	84.874	Oryzias_latipes_hsok
ENSPMGG00000006534	cstf2	96	86.639	ENSOMEG00000015507	cstf2	96	86.611	Oryzias_melastigma
ENSPMGG00000006534	cstf2	97	73.519	ENSOGAG00000011192	CSTF2	80	82.500	Otolemur_garnettii
ENSPMGG00000006534	cstf2	97	59.794	ENSOARG00000001022	CSTF2	84	81.328	Ovis_aries
ENSPMGG00000006534	cstf2	97	59.441	ENSPPAG00000031804	CSTF2	99	58.392	Pan_paniscus
ENSPMGG00000006534	cstf2	97	58.920	ENSPPRG00000022492	CSTF2	84	81.743	Panthera_pardus
ENSPMGG00000006534	cstf2	97	58.592	ENSPTIG00000009922	CSTF2	84	80.913	Panthera_tigris_altaica
ENSPMGG00000006534	cstf2	97	59.441	ENSPTRG00000022090	CSTF2	99	58.392	Pan_troglodytes
ENSPMGG00000006534	cstf2	97	73.611	ENSPANG00000002303	CSTF2	80	81.743	Papio_anubis
ENSPMGG00000006534	cstf2	98	73.913	ENSPKIG00000005033	cstf2	93	73.684	Paramormyrops_kingsleyae
ENSPMGG00000006534	cstf2	96	58.844	ENSPEMG00000019415	Cstf2	99	55.648	Peromyscus_maniculatus_bairdii
ENSPMGG00000006534	cstf2	97	60.656	ENSPCIG00000002989	CSTF2	84	85.950	Phascolarctos_cinereus
ENSPMGG00000006534	cstf2	96	82.857	ENSPLAG00000011176	cstf2	96	83.265	Poecilia_latipinna
ENSPMGG00000006534	cstf2	96	83.197	ENSPMEG00000017743	cstf2	96	83.811	Poecilia_mexicana
ENSPMGG00000006534	cstf2	67	85.131	ENSPREG00000011481	cstf2	97	75.774	Poecilia_reticulata
ENSPMGG00000006534	cstf2	97	58.756	ENSPPYG00000020541	CSTF2	99	58.054	Pongo_abelii
ENSPMGG00000006534	cstf2	97	58.783	ENSPCOG00000027744	CSTF2	99	58.144	Propithecus_coquereli
ENSPMGG00000006534	cstf2	93	47.636	ENSPVAG00000008342	CSTF2	90	55.702	Pteropus_vampyrus
ENSPMGG00000006534	cstf2	100	83.968	ENSPNYG00000010852	cstf2	94	93.151	Pundamilia_nyererei
ENSPMGG00000006534	cstf2	96	73.674	ENSPNAG00000018887	cstf2	97	73.157	Pygocentrus_nattereri
ENSPMGG00000006534	cstf2	96	58.163	ENSRNOG00000048025	Cstf2	99	58.722	Rattus_norvegicus
ENSPMGG00000006534	cstf2	97	59.578	ENSRBIG00000030745	CSTF2	99	58.524	Rhinopithecus_bieti
ENSPMGG00000006534	cstf2	97	59.441	ENSRROG00000045042	CSTF2	99	58.392	Rhinopithecus_roxellana
ENSPMGG00000006534	cstf2	97	73.958	ENSSBOG00000021649	CSTF2	99	58.217	Saimiri_boliviensis_boliviensis
ENSPMGG00000006534	cstf2	88	80.769	ENSSHAG00000003681	CSTF2	77	84.716	Sarcophilus_harrisii
ENSPMGG00000006534	cstf2	96	72.957	ENSSFOG00015006348	cstf2	98	71.536	Scleropages_formosus
ENSPMGG00000006534	cstf2	96	88.675	ENSSMAG00000013463	cstf2	96	89.957	Scophthalmus_maximus
ENSPMGG00000006534	cstf2	97	60.234	ENSSPUG00000005288	-	52	86.008	Sphenodon_punctatus
ENSPMGG00000006534	cstf2	97	59.844	ENSSSCG00000012486	CSTF2	84	81.743	Sus_scrofa
ENSPMGG00000006534	cstf2	97	59.732	ENSTGUG00000002253	CSTF2	87	84.739	Taeniopygia_guttata
ENSPMGG00000006534	cstf2	96	81.000	ENSTNIG00000016860	cstf2	99	81.213	Tetraodon_nigroviridis
ENSPMGG00000006534	cstf2	97	58.983	ENSTTRG00000013556	CSTF2	99	57.601	Tursiops_truncatus
ENSPMGG00000006534	cstf2	97	73.611	ENSUAMG00000026605	CSTF2	84	81.743	Ursus_americanus
ENSPMGG00000006534	cstf2	91	73.264	ENSUMAG00000012417	CSTF2	99	81.328	Ursus_maritimus
ENSPMGG00000006534	cstf2	75	68.481	ENSVPAG00000006466	CSTF2	67	65.527	Vicugna_pacos
ENSPMGG00000006534	cstf2	97	58.953	ENSVVUG00000004717	CSTF2	99	58.108	Vulpes_vulpes
ENSPMGG00000006534	cstf2	89	84.483	ENSXETG00000009642	cstf2	85	84.483	Xenopus_tropicalis
ENSPMGG00000006534	cstf2	67	98.485	ENSXCOG00000016436	cstf2	98	94.186	Xiphophorus_couchianus
ENSPMGG00000006534	cstf2	65	90.997	ENSXMAG00000013524	cstf2	96	80.235	Xiphophorus_maculatus