EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMGG00000007442 (Gene tree)
Gene ID: -
Gene Symbol: smfn
Alias: -
Full Name: small fragment nuclease
Gene Type: protein_coding
Species: Periophthalmus_magnuspinnatus
Status: putative
Strand: Plus strand
Length: 6547 bases
Position: chrKN463212.1:772597-779143
Accession: ZDB-GENE-040426-1709
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMGP00000008998	RNase_T	PF00929.24	1.1e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMGT00000009583	-	567	-	ENSPMGP00000008998	188 (aa)	-	-

Gene Model

Click here to download ENSPMGG00000007442's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMGG00000007442's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMGG00000007442	smfn	100	80.851	ENSG00000076043	REXO2	100	80.851	Homo_sapiens
ENSPMGG00000007442	smfn	61	81.739	ENSAPOG00000011971	smfn	99	81.739	Acanthochromis_polyacanthus
ENSPMGG00000007442	smfn	100	80.851	ENSAMEG00000013263	REXO2	79	80.851	Ailuropoda_melanoleuca
ENSPMGG00000007442	smfn	97	85.246	ENSACIG00000023553	smfn	98	85.246	Amphilophus_citrinellus
ENSPMGG00000007442	smfn	69	83.077	ENSAOCG00000011565	smfn	79	83.077	Amphiprion_ocellaris
ENSPMGG00000007442	smfn	97	84.615	ENSAPEG00000012435	smfn	67	84.615	Amphiprion_percula
ENSPMGG00000007442	smfn	99	82.796	ENSATEG00000015385	smfn	67	82.796	Anabas_testudineus
ENSPMGG00000007442	smfn	100	79.255	ENSAPLG00000005045	REXO2	93	79.255	Anas_platyrhynchos
ENSPMGG00000007442	smfn	93	72.989	ENSACAG00000011631	REXO2	81	72.989	Anolis_carolinensis
ENSPMGG00000007442	smfn	100	81.383	ENSANAG00000020834	REXO2	79	81.383	Aotus_nancymaae
ENSPMGG00000007442	smfn	62	62.069	ENSANAG00000027457	-	98	59.441	Aotus_nancymaae
ENSPMGG00000007442	smfn	97	82.514	ENSACLG00000024566	smfn	95	82.873	Astatotilapia_calliptera
ENSPMGG00000007442	smfn	100	80.851	ENSBTAG00000005843	REXO2	79	80.851	Bos_taurus
ENSPMGG00000007442	smfn	90	47.953	WBGene00007429	C08B6.8	95	52.703	Caenorhabditis_elegans
ENSPMGG00000007442	smfn	100	80.319	ENSCJAG00000012434	REXO2	79	80.319	Callithrix_jacchus
ENSPMGG00000007442	smfn	100	79.787	ENSCAFG00000013511	REXO2	79	79.787	Canis_familiaris
ENSPMGG00000007442	smfn	100	80.851	ENSCAFG00020002513	REXO2	79	80.851	Canis_lupus_dingo
ENSPMGG00000007442	smfn	100	80.851	ENSCHIG00000009264	REXO2	79	80.851	Capra_hircus
ENSPMGG00000007442	smfn	100	71.277	ENSTSYG00000027948	-	96	71.277	Carlito_syrichta
ENSPMGG00000007442	smfn	100	80.851	ENSTSYG00000002237	REXO2	79	80.851	Carlito_syrichta
ENSPMGG00000007442	smfn	100	81.383	ENSCAPG00000006093	REXO2	100	81.383	Cavia_aperea
ENSPMGG00000007442	smfn	100	81.383	ENSCPOG00000010548	REXO2	79	81.383	Cavia_porcellus
ENSPMGG00000007442	smfn	100	81.383	ENSCCAG00000034979	REXO2	79	81.383	Cebus_capucinus
ENSPMGG00000007442	smfn	100	80.851	ENSCATG00000015278	REXO2	79	80.851	Cercocebus_atys
ENSPMGG00000007442	smfn	100	81.383	ENSCLAG00000011195	REXO2	80	81.383	Chinchilla_lanigera
ENSPMGG00000007442	smfn	100	80.851	ENSCSAG00000002754	REXO2	79	80.851	Chlorocebus_sabaeus
ENSPMGG00000007442	smfn	100	79.787	ENSCHOG00000000642	-	79	79.787	Choloepus_hoffmanni
ENSPMGG00000007442	smfn	77	73.793	ENSCPBG00000009359	REXO2	100	73.793	Chrysemys_picta_bellii
ENSPMGG00000007442	smfn	88	59.036	ENSCING00000009858	-	80	59.036	Ciona_intestinalis
ENSPMGG00000007442	smfn	100	80.851	ENSCANG00000034756	REXO2	79	80.851	Colobus_angolensis_palliatus
ENSPMGG00000007442	smfn	100	78.191	ENSCGRG00001010922	-	92	78.191	Cricetulus_griseus_chok1gshd
ENSPMGG00000007442	smfn	100	78.723	ENSCGRG00001013673	-	92	78.723	Cricetulus_griseus_chok1gshd
ENSPMGG00000007442	smfn	100	80.851	ENSCGRG00001019814	-	79	80.851	Cricetulus_griseus_chok1gshd
ENSPMGG00000007442	smfn	100	80.851	ENSCGRG00000006235	Rexo2	79	80.851	Cricetulus_griseus_crigri
ENSPMGG00000007442	smfn	97	89.617	ENSCSEG00000007214	smfn	66	89.617	Cynoglossus_semilaevis
ENSPMGG00000007442	smfn	97	82.514	ENSCVAG00000012008	smfn	99	82.514	Cyprinodon_variegatus
ENSPMGG00000007442	smfn	99	79.679	ENSDARG00000009806	smfn	71	79.679	Danio_rerio
ENSPMGG00000007442	smfn	85	83.750	ENSDNOG00000046533	REXO2	77	83.750	Dasypus_novemcinctus
ENSPMGG00000007442	smfn	100	81.383	ENSDORG00000011255	Rexo2	79	81.383	Dipodomys_ordii
ENSPMGG00000007442	smfn	100	63.298	ENSDORG00000025142	-	81	63.298	Dipodomys_ordii
ENSPMGG00000007442	smfn	89	55.090	FBgn0039115	CG10214	79	55.090	Drosophila_melanogaster
ENSPMGG00000007442	smfn	89	79.762	ENSEBUG00000013964	REXO2	58	79.762	Eptatretus_burgeri
ENSPMGG00000007442	smfn	100	80.851	ENSEASG00005006674	REXO2	79	80.851	Equus_asinus_asinus
ENSPMGG00000007442	smfn	100	80.851	ENSECAG00000005988	REXO2	79	80.851	Equus_caballus
ENSPMGG00000007442	smfn	96	83.978	ENSELUG00000020072	smfn	63	83.978	Esox_lucius
ENSPMGG00000007442	smfn	100	80.851	ENSFCAG00000018632	REXO2	79	80.851	Felis_catus
ENSPMGG00000007442	smfn	100	77.660	ENSFALG00000010044	REXO2	93	77.660	Ficedula_albicollis
ENSPMGG00000007442	smfn	100	81.383	ENSFDAG00000011764	REXO2	79	81.383	Fukomys_damarensis
ENSPMGG00000007442	smfn	92	84.971	ENSGMOG00000006370	smfn	90	84.971	Gadus_morhua
ENSPMGG00000007442	smfn	100	79.787	ENSGALG00000035980	REXO2	81	79.787	Gallus_gallus
ENSPMGG00000007442	smfn	97	82.514	ENSGAFG00000015349	smfn	65	82.514	Gambusia_affinis
ENSPMGG00000007442	smfn	95	81.564	ENSGACG00000020096	smfn	88	81.564	Gasterosteus_aculeatus
ENSPMGG00000007442	smfn	100	78.191	ENSGAGG00000021126	REXO2	82	78.191	Gopherus_agassizii
ENSPMGG00000007442	smfn	100	80.851	ENSGGOG00000023267	REXO2	79	80.851	Gorilla_gorilla
ENSPMGG00000007442	smfn	69	82.171	ENSHBUG00000020097	REXO2	63	82.171	Haplochromis_burtoni
ENSPMGG00000007442	smfn	100	80.851	ENSHGLG00000013556	REXO2	79	80.851	Heterocephalus_glaber_female
ENSPMGG00000007442	smfn	100	81.383	ENSHGLG00100005257	REXO2	79	81.383	Heterocephalus_glaber_male
ENSPMGG00000007442	smfn	96	77.778	ENSHCOG00000007122	smfn	98	77.778	Hippocampus_comes
ENSPMGG00000007442	smfn	96	87.293	ENSIPUG00000020440	rexo2	67	87.293	Ictalurus_punctatus
ENSPMGG00000007442	smfn	100	81.383	ENSSTOG00000012465	REXO2	79	81.383	Ictidomys_tridecemlineatus
ENSPMGG00000007442	smfn	100	81.383	ENSJJAG00000013710	-	79	81.383	Jaculus_jaculus
ENSPMGG00000007442	smfn	100	56.915	ENSJJAG00000022605	-	55	85.714	Jaculus_jaculus
ENSPMGG00000007442	smfn	97	84.699	ENSKMAG00000016795	smfn	65	84.699	Kryptolebias_marmoratus
ENSPMGG00000007442	smfn	97	84.615	ENSLBEG00000006021	smfn	96	84.615	Labrus_bergylta
ENSPMGG00000007442	smfn	100	67.895	ENSLACG00000018623	REXO2	77	67.895	Latimeria_chalumnae
ENSPMGG00000007442	smfn	99	84.492	ENSLOCG00000002389	smfn	89	84.492	Lepisosteus_oculatus
ENSPMGG00000007442	smfn	100	80.851	ENSLAFG00000012451	REXO2	79	80.851	Loxodonta_africana
ENSPMGG00000007442	smfn	100	80.851	ENSMFAG00000041155	REXO2	79	80.851	Macaca_fascicularis
ENSPMGG00000007442	smfn	100	80.851	ENSMMUG00000012269	REXO2	79	80.851	Macaca_mulatta
ENSPMGG00000007442	smfn	100	80.851	ENSMNEG00000033379	REXO2	79	80.851	Macaca_nemestrina
ENSPMGG00000007442	smfn	100	80.851	ENSMLEG00000036571	REXO2	79	80.851	Mandrillus_leucophaeus
ENSPMGG00000007442	smfn	99	83.957	ENSMAMG00000021209	smfn	67	83.957	Mastacembelus_armatus
ENSPMGG00000007442	smfn	97	82.514	ENSMZEG00005023224	-	70	82.514	Maylandia_zebra
ENSPMGG00000007442	smfn	97	82.514	ENSMZEG00005020730	REXO2	70	82.514	Maylandia_zebra
ENSPMGG00000007442	smfn	86	77.914	ENSMGAG00000003026	REXO2	100	77.914	Meleagris_gallopavo
ENSPMGG00000007442	smfn	100	80.851	ENSMAUG00000014576	Rexo2	79	80.851	Mesocricetus_auratus
ENSPMGG00000007442	smfn	100	81.383	ENSMICG00000010094	REXO2	79	81.383	Microcebus_murinus
ENSPMGG00000007442	smfn	100	80.851	ENSMOCG00000009016	Rexo2	79	80.851	Microtus_ochrogaster
ENSPMGG00000007442	smfn	97	80.328	ENSMMOG00000006430	smfn	68	80.328	Mola_mola
ENSPMGG00000007442	smfn	100	80.319	ENSMODG00000013913	REXO2	80	80.319	Monodelphis_domestica
ENSPMGG00000007442	smfn	99	81.183	ENSMALG00000018130	smfn	53	81.183	Monopterus_albus
ENSPMGG00000007442	smfn	100	79.255	MGP_CAROLIEiJ_G0032166	Rexo2	79	79.255	Mus_caroli
ENSPMGG00000007442	smfn	96	81.215	ENSMUSG00000032026	Rexo2	76	81.215	Mus_musculus
ENSPMGG00000007442	smfn	96	81.215	MGP_PahariEiJ_G0015034	Rexo2	76	81.215	Mus_pahari
ENSPMGG00000007442	smfn	96	81.215	MGP_SPRETEiJ_G0033305	Rexo2	76	81.215	Mus_spretus
ENSPMGG00000007442	smfn	100	80.851	ENSMPUG00000003947	REXO2	79	80.851	Mustela_putorius_furo
ENSPMGG00000007442	smfn	100	79.787	ENSMLUG00000009030	REXO2	79	79.787	Myotis_lucifugus
ENSPMGG00000007442	smfn	100	81.383	ENSNGAG00000008819	Rexo2	92	81.383	Nannospalax_galili
ENSPMGG00000007442	smfn	100	80.851	ENSNBRG00000006529	smfn	98	80.851	Neolamprologus_brichardi
ENSPMGG00000007442	smfn	100	80.851	ENSNLEG00000029745	REXO2	79	80.851	Nomascus_leucogenys
ENSPMGG00000007442	smfn	100	79.787	ENSMEUG00000011558	REXO2	86	79.787	Notamacropus_eugenii
ENSPMGG00000007442	smfn	71	76.866	ENSOPRG00000011076	REXO2	57	76.866	Ochotona_princeps
ENSPMGG00000007442	smfn	86	66.460	ENSODEG00000016046	-	79	66.460	Octodon_degus
ENSPMGG00000007442	smfn	100	81.383	ENSODEG00000009750	-	100	81.383	Octodon_degus
ENSPMGG00000007442	smfn	97	84.153	ENSONIG00000001954	smfn	78	84.153	Oreochromis_niloticus
ENSPMGG00000007442	smfn	100	79.255	ENSOANG00000001754	REXO2	79	79.255	Ornithorhynchus_anatinus
ENSPMGG00000007442	smfn	99	81.720	ENSOCUG00000004274	REXO2	74	81.720	Oryctolagus_cuniculus
ENSPMGG00000007442	smfn	98	82.703	ENSORLG00000005119	smfn	60	82.703	Oryzias_latipes
ENSPMGG00000007442	smfn	98	82.703	ENSORLG00020010121	smfn	60	82.703	Oryzias_latipes_hni
ENSPMGG00000007442	smfn	98	83.243	ENSORLG00015015699	smfn	60	83.243	Oryzias_latipes_hsok
ENSPMGG00000007442	smfn	98	78.378	ENSOMEG00000016878	REXO2	68	78.378	Oryzias_melastigma
ENSPMGG00000007442	smfn	76	74.648	ENSOMEG00000008940	-	99	74.648	Oryzias_melastigma
ENSPMGG00000007442	smfn	100	81.383	ENSOGAG00000016860	REXO2	79	81.383	Otolemur_garnettii
ENSPMGG00000007442	smfn	100	80.851	ENSOARG00000001040	REXO2	88	80.851	Ovis_aries
ENSPMGG00000007442	smfn	100	80.851	ENSPPAG00000039849	REXO2	79	80.851	Pan_paniscus
ENSPMGG00000007442	smfn	100	80.851	ENSPPRG00000007255	REXO2	79	80.851	Panthera_pardus
ENSPMGG00000007442	smfn	100	80.851	ENSPTIG00000015578	REXO2	100	80.851	Panthera_tigris_altaica
ENSPMGG00000007442	smfn	100	80.851	ENSPTRG00000004306	REXO2	79	80.851	Pan_troglodytes
ENSPMGG00000007442	smfn	100	80.851	ENSPANG00000010675	REXO2	79	80.851	Papio_anubis
ENSPMGG00000007442	smfn	96	85.083	ENSPKIG00000000911	smfn	77	86.486	Paramormyrops_kingsleyae
ENSPMGG00000007442	smfn	100	79.255	ENSPSIG00000005151	REXO2	68	79.255	Pelodiscus_sinensis
ENSPMGG00000007442	smfn	86	73.292	ENSPEMG00000001421	Rexo2	75	73.292	Peromyscus_maniculatus_bairdii
ENSPMGG00000007442	smfn	62	78.448	ENSPMAG00000001022	REXO2	100	78.448	Petromyzon_marinus
ENSPMGG00000007442	smfn	100	80.319	ENSPCIG00000011227	REXO2	50	80.319	Phascolarctos_cinereus
ENSPMGG00000007442	smfn	99	82.888	ENSPFOG00000017861	smfn	92	82.888	Poecilia_formosa
ENSPMGG00000007442	smfn	87	79.755	ENSPLAG00000007327	REXO2	62	79.755	Poecilia_latipinna
ENSPMGG00000007442	smfn	99	82.796	ENSPMEG00000017343	smfn	66	82.796	Poecilia_mexicana
ENSPMGG00000007442	smfn	97	83.060	ENSPREG00000016438	smfn	65	83.060	Poecilia_reticulata
ENSPMGG00000007442	smfn	100	80.851	ENSPPYG00000003895	REXO2	79	80.851	Pongo_abelii
ENSPMGG00000007442	smfn	100	80.319	ENSPCAG00000005237	REXO2	79	80.319	Procavia_capensis
ENSPMGG00000007442	smfn	78	83.562	ENSPCOG00000027639	REXO2	75	83.562	Propithecus_coquereli
ENSPMGG00000007442	smfn	85	79.375	ENSPVAG00000005295	REXO2	67	79.375	Pteropus_vampyrus
ENSPMGG00000007442	smfn	97	81.967	ENSPNYG00000018401	smfn	70	81.967	Pundamilia_nyererei
ENSPMGG00000007442	smfn	97	85.246	ENSPNAG00000005290	smfn	68	85.246	Pygocentrus_nattereri
ENSPMGG00000007442	smfn	100	79.787	ENSRNOG00000018939	Rexo2	79	79.787	Rattus_norvegicus
ENSPMGG00000007442	smfn	100	80.851	ENSRBIG00000037809	REXO2	79	80.851	Rhinopithecus_bieti
ENSPMGG00000007442	smfn	100	80.851	ENSRROG00000038928	REXO2	79	80.851	Rhinopithecus_roxellana
ENSPMGG00000007442	smfn	91	43.017	YLR059C	REX2	67	43.017	Saccharomyces_cerevisiae
ENSPMGG00000007442	smfn	100	81.383	ENSSBOG00000028651	REXO2	79	81.383	Saimiri_boliviensis_boliviensis
ENSPMGG00000007442	smfn	99	80.645	ENSSHAG00000008008	REXO2	79	80.645	Sarcophilus_harrisii
ENSPMGG00000007442	smfn	98	83.243	ENSSFOG00015022414	smfn	98	83.243	Scleropages_formosus
ENSPMGG00000007442	smfn	98	81.081	ENSSMAG00000003168	smfn	67	81.081	Scophthalmus_maximus
ENSPMGG00000007442	smfn	99	84.946	ENSSDUG00000015624	smfn	65	84.946	Seriola_dumerili
ENSPMGG00000007442	smfn	99	84.946	ENSSLDG00000014005	smfn	65	84.946	Seriola_lalandi_dorsalis
ENSPMGG00000007442	smfn	68	85.827	ENSSARG00000014530	REXO2	100	85.827	Sorex_araneus
ENSPMGG00000007442	smfn	84	75.316	ENSSPUG00000006005	REXO2	85	75.316	Sphenodon_punctatus
ENSPMGG00000007442	smfn	97	87.912	ENSSPAG00000001530	smfn	98	87.912	Stegastes_partitus
ENSPMGG00000007442	smfn	100	80.851	ENSSSCG00000015056	REXO2	79	80.851	Sus_scrofa
ENSPMGG00000007442	smfn	100	76.596	ENSTGUG00000000121	REXO2	80	76.596	Taeniopygia_guttata
ENSPMGG00000007442	smfn	98	80.000	ENSTRUG00000021529	smfn	68	80.000	Takifugu_rubripes
ENSPMGG00000007442	smfn	96	81.215	ENSTNIG00000008588	smfn	80	81.215	Tetraodon_nigroviridis
ENSPMGG00000007442	smfn	100	81.383	ENSTBEG00000017040	REXO2	79	81.383	Tupaia_belangeri
ENSPMGG00000007442	smfn	100	80.319	ENSTTRG00000014928	REXO2	79	80.319	Tursiops_truncatus
ENSPMGG00000007442	smfn	100	74.211	ENSUAMG00000019096	REXO2	75	82.877	Ursus_americanus
ENSPMGG00000007442	smfn	100	80.851	ENSUMAG00000003770	REXO2	79	80.851	Ursus_maritimus
ENSPMGG00000007442	smfn	100	63.298	ENSVPAG00000006301	REXO2	100	63.298	Vicugna_pacos
ENSPMGG00000007442	smfn	100	80.851	ENSVVUG00000025223	REXO2	79	80.851	Vulpes_vulpes
ENSPMGG00000007442	smfn	100	79.787	ENSXETG00000012648	rexo2	77	79.365	Xenopus_tropicalis
ENSPMGG00000007442	smfn	99	81.183	ENSXCOG00000018838	smfn	95	81.183	Xiphophorus_couchianus
ENSPMGG00000007442	smfn	97	81.967	ENSXMAG00000021125	smfn	59	81.967	Xiphophorus_maculatus