EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMGG00000007680 (Gene tree)
Gene ID: -
Gene Symbol: rab13
Alias: -
Full Name: RAB13%2C member RAS oncogene family
Gene Type: protein_coding
Species: Periophthalmus_magnuspinnatus
Status: putative
Strand: Plus strand
Length: 4345 bases
Position: chrKN468701.1:140591-144935
Accession: ZDB-GENE-030826-30
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMGP00000009327	MMR_HSR1	PF01926.23	9.4e-05	1	1
ENSPMGP00000009312	MMR_HSR1	PF01926.23	9.8e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMGT00000009948	-	615	-	ENSPMGP00000009327	204 (aa)	-	-
ENSPMGT00000009932	-	603	-	ENSPMGP00000009312	200 (aa)	-	-

Gene Model

Click here to download ENSPMGG00000007680's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMGG00000007680's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMGG00000007680	rab13	99	75.743	ENSG00000143545	RAB13	99	75.743	Homo_sapiens
ENSPMGG00000007680	rab13	97	87.685	ENSACIG00000008584	rab13	98	87.685	Amphilophus_citrinellus
ENSPMGG00000007680	rab13	99	76.471	ENSANAG00000030247	-	99	76.471	Aotus_nancymaae
ENSPMGG00000007680	rab13	100	89.604	ENSAMXG00000030712	rab13	100	89.604	Astyanax_mexicanus
ENSPMGG00000007680	rab13	99	75.000	ENSBTAG00000017604	RAB13	99	75.000	Bos_taurus
ENSPMGG00000007680	rab13	84	44.970	WBGene00019317	K02E10.1	78	44.970	Caenorhabditis_elegans
ENSPMGG00000007680	rab13	91	81.421	ENSCJAG00000009933	-	99	75.743	Callithrix_jacchus
ENSPMGG00000007680	rab13	99	75.248	ENSCHIG00000022271	-	99	75.248	Capra_hircus
ENSPMGG00000007680	rab13	99	76.733	ENSCPOG00000011491	-	99	76.733	Cavia_porcellus
ENSPMGG00000007680	rab13	99	75.743	ENSCCAG00000028502	-	99	75.743	Cebus_capucinus
ENSPMGG00000007680	rab13	99	75.743	ENSCATG00000041779	-	99	75.743	Cercocebus_atys
ENSPMGG00000007680	rab13	99	75.743	ENSCLAG00000006603	-	99	75.743	Chinchilla_lanigera
ENSPMGG00000007680	rab13	99	75.743	ENSCANG00000036573	-	99	75.743	Colobus_angolensis_palliatus
ENSPMGG00000007680	rab13	99	75.490	ENSCGRG00001021505	Rab13	99	75.490	Cricetulus_griseus_chok1gshd
ENSPMGG00000007680	rab13	99	75.490	ENSCGRG00000012126	Rab13	99	75.490	Cricetulus_griseus_crigri
ENSPMGG00000007680	rab13	100	91.500	ENSCSEG00000002358	rab13	100	91.500	Cynoglossus_semilaevis
ENSPMGG00000007680	rab13	100	89.500	ENSDARG00000034771	rab13	100	89.500	Danio_rerio
ENSPMGG00000007680	rab13	99	78.218	ENSDORG00000001591	Rab13	99	78.218	Dipodomys_ordii
ENSPMGG00000007680	rab13	99	76.238	ENSEASG00005000683	-	99	76.238	Equus_asinus_asinus
ENSPMGG00000007680	rab13	99	76.238	ENSECAG00000016551	RAB13	99	76.238	Equus_caballus
ENSPMGG00000007680	rab13	100	73.399	ENSEEUG00000001233	-	100	73.399	Erinaceus_europaeus
ENSPMGG00000007680	rab13	100	90.000	ENSELUG00000012801	rab13	100	90.000	Esox_lucius
ENSPMGG00000007680	rab13	99	75.248	ENSFCAG00000045269	-	99	75.248	Felis_catus
ENSPMGG00000007680	rab13	66	87.879	ENSFDAG00000014469	-	100	87.879	Fukomys_damarensis
ENSPMGG00000007680	rab13	100	90.000	ENSFHEG00000021221	rab13	100	91.803	Fundulus_heteroclitus
ENSPMGG00000007680	rab13	100	94.000	ENSGACG00000011925	rab13	99	94.000	Gasterosteus_aculeatus
ENSPMGG00000007680	rab13	91	80.874	ENSGAGG00000000742	-	100	76.733	Gopherus_agassizii
ENSPMGG00000007680	rab13	99	75.743	ENSGGOG00000023693	RAB13	99	75.743	Gorilla_gorilla
ENSPMGG00000007680	rab13	99	75.622	ENSHGLG00000008749	RAB13	99	75.622	Heterocephalus_glaber_female
ENSPMGG00000007680	rab13	99	75.622	ENSHGLG00100013608	RAB13	99	75.622	Heterocephalus_glaber_male
ENSPMGG00000007680	rab13	100	88.000	ENSHCOG00000007440	rab13	100	93.956	Hippocampus_comes
ENSPMGG00000007680	rab13	100	88.557	ENSIPUG00000003199	rab13	100	88.557	Ictalurus_punctatus
ENSPMGG00000007680	rab13	99	75.980	ENSSTOG00000011222	-	99	75.980	Ictidomys_tridecemlineatus
ENSPMGG00000007680	rab13	99	77.228	ENSJJAG00000010575	Rab13	99	77.228	Jaculus_jaculus
ENSPMGG00000007680	rab13	100	89.000	ENSKMAG00000001908	rab13	100	89.000	Kryptolebias_marmoratus
ENSPMGG00000007680	rab13	100	93.500	ENSLBEG00000026779	rab13	100	93.500	Labrus_bergylta
ENSPMGG00000007680	rab13	88	76.136	ENSLACG00000008103	-	100	75.843	Latimeria_chalumnae
ENSPMGG00000007680	rab13	99	75.743	ENSMFAG00000041018	RAB13	99	75.743	Macaca_fascicularis
ENSPMGG00000007680	rab13	99	75.743	ENSMNEG00000028951	-	99	75.743	Macaca_nemestrina
ENSPMGG00000007680	rab13	99	75.743	ENSMLEG00000042247	-	99	75.743	Mandrillus_leucophaeus
ENSPMGG00000007680	rab13	100	93.000	ENSMAMG00000014602	rab13	100	93.000	Mastacembelus_armatus
ENSPMGG00000007680	rab13	99	75.980	ENSMAUG00000015713	Rab13	99	75.980	Mesocricetus_auratus
ENSPMGG00000007680	rab13	99	76.617	ENSMICG00000010340	-	99	76.617	Microcebus_murinus
ENSPMGG00000007680	rab13	99	75.743	ENSMOCG00000021448	Rab13	99	75.743	Microtus_ochrogaster
ENSPMGG00000007680	rab13	99	76.617	ENSMODG00000017295	-	84	76.617	Monodelphis_domestica
ENSPMGG00000007680	rab13	99	74.510	MGP_CAROLIEiJ_G0025227	Rab13	99	74.510	Mus_caroli
ENSPMGG00000007680	rab13	99	74.510	ENSMUSG00000027935	Rab13	99	74.510	Mus_musculus
ENSPMGG00000007680	rab13	100	74.146	MGP_PahariEiJ_G0026671	Rab13	100	74.146	Mus_pahari
ENSPMGG00000007680	rab13	99	75.490	ENSNGAG00000010309	Rab13	99	75.490	Nannospalax_galili
ENSPMGG00000007680	rab13	100	92.500	ENSNBRG00000004124	rab13	100	92.500	Neolamprologus_brichardi
ENSPMGG00000007680	rab13	99	75.743	ENSNLEG00000028944	-	99	75.743	Nomascus_leucogenys
ENSPMGG00000007680	rab13	99	78.218	ENSMEUG00000009667	-	99	78.218	Notamacropus_eugenii
ENSPMGG00000007680	rab13	64	88.189	ENSODEG00000012634	-	100	88.189	Octodon_degus
ENSPMGG00000007680	rab13	99	75.743	ENSODEG00000010443	-	99	75.743	Octodon_degus
ENSPMGG00000007680	rab13	100	88.614	ENSONIG00000006340	rab13	100	88.614	Oreochromis_niloticus
ENSPMGG00000007680	rab13	87	84.971	ENSOCUG00000006286	-	99	83.523	Oryctolagus_cuniculus
ENSPMGG00000007680	rab13	100	92.500	ENSOMEG00000008210	rab13	100	92.500	Oryzias_melastigma
ENSPMGG00000007680	rab13	99	74.500	ENSOGAG00000016969	-	99	74.500	Otolemur_garnettii
ENSPMGG00000007680	rab13	99	75.743	ENSPPAG00000028435	-	99	75.743	Pan_paniscus
ENSPMGG00000007680	rab13	99	75.248	ENSPPRG00000008865	-	99	75.248	Panthera_pardus
ENSPMGG00000007680	rab13	99	75.743	ENSPTRG00000001370	RAB13	99	75.743	Pan_troglodytes
ENSPMGG00000007680	rab13	99	75.743	ENSPANG00000004479	-	99	75.743	Papio_anubis
ENSPMGG00000007680	rab13	54	88.889	ENSPEMG00000017353	-	86	84.348	Peromyscus_maniculatus_bairdii
ENSPMGG00000007680	rab13	99	78.218	ENSPCIG00000029350	-	99	78.218	Phascolarctos_cinereus
ENSPMGG00000007680	rab13	88	93.750	ENSPLAG00000005832	RAB13	96	92.778	Poecilia_latipinna
ENSPMGG00000007680	rab13	100	91.000	ENSPREG00000017567	rab13	100	91.000	Poecilia_reticulata
ENSPMGG00000007680	rab13	99	75.743	ENSPPYG00000000790	-	99	75.743	Pongo_abelii
ENSPMGG00000007680	rab13	99	76.961	ENSPCOG00000012189	-	99	76.961	Propithecus_coquereli
ENSPMGG00000007680	rab13	99	77.114	ENSPVAG00000011095	-	99	77.114	Pteropus_vampyrus
ENSPMGG00000007680	rab13	96	87.692	ENSPNAG00000004189	rab13	93	94.886	Pygocentrus_nattereri
ENSPMGG00000007680	rab13	99	74.020	ENSRNOG00000016733	Rab13	99	74.020	Rattus_norvegicus
ENSPMGG00000007680	rab13	99	75.743	ENSRBIG00000008552	-	99	75.743	Rhinopithecus_bieti
ENSPMGG00000007680	rab13	99	75.743	ENSRROG00000036885	-	99	75.743	Rhinopithecus_roxellana
ENSPMGG00000007680	rab13	99	76.617	ENSSBOG00000020342	-	99	76.617	Saimiri_boliviensis_boliviensis
ENSPMGG00000007680	rab13	99	78.218	ENSSHAG00000011866	-	99	78.218	Sarcophilus_harrisii
ENSPMGG00000007680	rab13	99	75.743	ENSSSCG00000006564	-	99	75.743	Sus_scrofa
ENSPMGG00000007680	rab13	100	95.000	ENSTRUG00000024177	rab13	100	95.000	Takifugu_rubripes
ENSPMGG00000007680	rab13	99	77.723	ENSTBEG00000012734	-	99	77.723	Tupaia_belangeri
ENSPMGG00000007680	rab13	99	75.743	ENSTTRG00000011183	-	99	75.743	Tursiops_truncatus
ENSPMGG00000007680	rab13	69	79.710	ENSXETG00000020729	rab13	100	72.500	Xenopus_tropicalis
ENSPMGG00000007680	rab13	92	88.830	ENSXCOG00000019533	rab13	99	88.830	Xiphophorus_couchianus