EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMGG00000008120 (Gene tree)
Gene ID: -
Gene Symbol: snrnp48
Alias: -
Full Name: small nuclear ribonucleoprotein 48 (U11/U12)
Gene Type: protein_coding
Species: Periophthalmus_magnuspinnatus
Status: putative
Strand: Minus strand
Length: 9240 bases
Position: chrKN464499.1:5447-14686
Accession: ZDB-GENE-030131-4482
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMGP00000009824	zf-U11-48K	PF05253.12	9.1e-08	1	1
ENSPMGP00000009832	zf-U11-48K	PF05253.12	9.7e-08	1	1
ENSPMGP00000009804	zf-U11-48K	PF05253.12	1.2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMGT00000010482	-	822	-	ENSPMGP00000009832	273 (aa)	-	-
ENSPMGT00000010474	-	816	-	ENSPMGP00000009824	271 (aa)	-	-
ENSPMGT00000010454	-	957	-	ENSPMGP00000009804	318 (aa)	-	-

Gene Model

Click here to download ENSPMGG00000008120's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMGG00000008120's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMGG00000008120	snrnp48	86	48.571	ENSG00000168566	SNRNP48	72	48.571	Homo_sapiens
ENSPMGG00000008120	snrnp48	94	67.041	ENSAPOG00000021430	snrnp48	77	67.041	Acanthochromis_polyacanthus
ENSPMGG00000008120	snrnp48	86	48.387	ENSAMEG00000017349	SNRNP48	70	48.387	Ailuropoda_melanoleuca
ENSPMGG00000008120	snrnp48	92	65.251	ENSACIG00000002032	snrnp48	76	65.251	Amphilophus_citrinellus
ENSPMGG00000008120	snrnp48	93	66.794	ENSAOCG00000010562	snrnp48	76	66.794	Amphiprion_ocellaris
ENSPMGG00000008120	snrnp48	95	65.543	ENSAPEG00000003231	snrnp48	78	65.543	Amphiprion_percula
ENSPMGG00000008120	snrnp48	91	65.759	ENSATEG00000020210	snrnp48	80	62.774	Anabas_testudineus
ENSPMGG00000008120	snrnp48	73	53.302	ENSACAG00000002811	SNRNP48	64	53.302	Anolis_carolinensis
ENSPMGG00000008120	snrnp48	86	48.980	ENSANAG00000033538	SNRNP48	72	48.980	Aotus_nancymaae
ENSPMGG00000008120	snrnp48	95	55.431	ENSAMXG00000015309	snrnp48	79	55.431	Astyanax_mexicanus
ENSPMGG00000008120	snrnp48	85	46.964	ENSBTAG00000001123	SNRNP48	76	45.926	Bos_taurus
ENSPMGG00000008120	snrnp48	90	48.996	ENSCJAG00000021330	SNRNP48	75	48.996	Callithrix_jacchus
ENSPMGG00000008120	snrnp48	95	46.886	ENSCAFG00000009574	SNRNP48	67	46.739	Canis_familiaris
ENSPMGG00000008120	snrnp48	96	46.377	ENSCAFG00020013203	SNRNP48	79	46.377	Canis_lupus_dingo
ENSPMGG00000008120	snrnp48	85	47.773	ENSCHIG00000015216	SNRNP48	72	48.016	Capra_hircus
ENSPMGG00000008120	snrnp48	86	48.571	ENSTSYG00000000698	SNRNP48	72	48.571	Carlito_syrichta
ENSPMGG00000008120	snrnp48	73	51.442	ENSCAPG00000006768	SNRNP48	91	37.993	Cavia_aperea
ENSPMGG00000008120	snrnp48	86	47.755	ENSCPOG00000007910	SNRNP48	72	48.178	Cavia_porcellus
ENSPMGG00000008120	snrnp48	90	48.276	ENSCCAG00000035652	SNRNP48	76	48.276	Cebus_capucinus
ENSPMGG00000008120	snrnp48	86	48.571	ENSCATG00000033947	SNRNP48	72	48.571	Cercocebus_atys
ENSPMGG00000008120	snrnp48	90	48.249	ENSCLAG00000003765	SNRNP48	75	48.649	Chinchilla_lanigera
ENSPMGG00000008120	snrnp48	86	48.980	ENSCSAG00000007409	SNRNP48	72	48.980	Chlorocebus_sabaeus
ENSPMGG00000008120	snrnp48	78	50.224	ENSCPBG00000019146	SNRNP48	69	50.224	Chrysemys_picta_bellii
ENSPMGG00000008120	snrnp48	86	48.980	ENSCANG00000030017	SNRNP48	72	48.980	Colobus_angolensis_palliatus
ENSPMGG00000008120	snrnp48	90	48.649	ENSCGRG00001001076	-	75	48.649	Cricetulus_griseus_chok1gshd
ENSPMGG00000008120	snrnp48	82	42.797	ENSCGRG00001008805	-	73	42.797	Cricetulus_griseus_chok1gshd
ENSPMGG00000008120	snrnp48	90	48.649	ENSCGRG00000007781	Snrnp48	75	48.649	Cricetulus_griseus_crigri
ENSPMGG00000008120	snrnp48	91	66.279	ENSCSEG00000000722	snrnp48	71	66.279	Cynoglossus_semilaevis
ENSPMGG00000008120	snrnp48	96	65.357	ENSCVAG00000019829	snrnp48	70	65.357	Cyprinodon_variegatus
ENSPMGG00000008120	snrnp48	88	49.600	ENSDARG00000039989	snrnp48	72	49.600	Danio_rerio
ENSPMGG00000008120	snrnp48	92	46.591	ENSDNOG00000014978	SNRNP48	76	46.591	Dasypus_novemcinctus
ENSPMGG00000008120	snrnp48	86	48.387	ENSDORG00000015140	Snrnp48	72	48.387	Dipodomys_ordii
ENSPMGG00000008120	snrnp48	91	47.328	ENSEASG00005012021	SNRNP48	76	47.328	Equus_asinus_asinus
ENSPMGG00000008120	snrnp48	91	47.710	ENSECAG00000026937	SNRNP48	76	47.710	Equus_caballus
ENSPMGG00000008120	snrnp48	86	32.932	ENSEEUG00000015437	SNRNP48	72	32.932	Erinaceus_europaeus
ENSPMGG00000008120	snrnp48	95	56.877	ENSELUG00000009766	snrnp48	75	56.877	Esox_lucius
ENSPMGG00000008120	snrnp48	90	46.743	ENSFCAG00000018853	SNRNP48	72	48.193	Felis_catus
ENSPMGG00000008120	snrnp48	73	54.286	ENSFALG00000007797	SNRNP48	66	54.286	Ficedula_albicollis
ENSPMGG00000008120	snrnp48	86	48.571	ENSFDAG00000009231	SNRNP48	72	48.571	Fukomys_damarensis
ENSPMGG00000008120	snrnp48	71	75.610	ENSFHEG00000014647	snrnp48	76	71.111	Fundulus_heteroclitus
ENSPMGG00000008120	snrnp48	89	61.111	ENSGMOG00000018599	-	78	61.089	Gadus_morhua
ENSPMGG00000008120	snrnp48	73	54.762	ENSGALG00000013005	SNRNP48	70	54.762	Gallus_gallus
ENSPMGG00000008120	snrnp48	99	63.701	ENSGAFG00000021639	snrnp48	75	66.031	Gambusia_affinis
ENSPMGG00000008120	snrnp48	90	64.567	ENSGACG00000017756	-	76	64.341	Gasterosteus_aculeatus
ENSPMGG00000008120	snrnp48	74	50.935	ENSGAGG00000000865	SNRNP48	69	50.935	Gopherus_agassizii
ENSPMGG00000008120	snrnp48	86	48.980	ENSGGOG00000013220	SNRNP48	72	48.980	Gorilla_gorilla
ENSPMGG00000008120	snrnp48	92	66.154	ENSHBUG00000017066	snrnp48	75	66.160	Haplochromis_burtoni
ENSPMGG00000008120	snrnp48	86	48.178	ENSHGLG00000015241	SNRNP48	72	48.178	Heterocephalus_glaber_female
ENSPMGG00000008120	snrnp48	86	48.178	ENSHGLG00100010027	SNRNP48	72	48.178	Heterocephalus_glaber_male
ENSPMGG00000008120	snrnp48	91	63.566	ENSHCOG00000014066	snrnp48	79	60.072	Hippocampus_comes
ENSPMGG00000008120	snrnp48	86	48.980	ENSSTOG00000014635	SNRNP48	72	48.980	Ictidomys_tridecemlineatus
ENSPMGG00000008120	snrnp48	86	48.571	ENSJJAG00000011495	Snrnp48	72	48.571	Jaculus_jaculus
ENSPMGG00000008120	snrnp48	88	68.145	ENSKMAG00000016514	snrnp48	75	65.267	Kryptolebias_marmoratus
ENSPMGG00000008120	snrnp48	93	65.267	ENSLBEG00000026249	snrnp48	76	65.267	Labrus_bergylta
ENSPMGG00000008120	snrnp48	96	49.638	ENSLACG00000003958	SNRNP48	81	49.638	Latimeria_chalumnae
ENSPMGG00000008120	snrnp48	90	54.651	ENSLOCG00000004187	snrnp48	74	54.651	Lepisosteus_oculatus
ENSPMGG00000008120	snrnp48	86	48.193	ENSLAFG00000011152	SNRNP48	72	48.193	Loxodonta_africana
ENSPMGG00000008120	snrnp48	86	48.980	ENSMFAG00000045216	SNRNP48	72	48.980	Macaca_fascicularis
ENSPMGG00000008120	snrnp48	86	48.980	ENSMMUG00000014785	SNRNP48	72	48.980	Macaca_mulatta
ENSPMGG00000008120	snrnp48	86	49.194	ENSMNEG00000042269	SNRNP48	72	48.980	Macaca_nemestrina
ENSPMGG00000008120	snrnp48	86	48.980	ENSMLEG00000034004	SNRNP48	72	48.980	Mandrillus_leucophaeus
ENSPMGG00000008120	snrnp48	93	66.794	ENSMAMG00000018673	snrnp48	67	66.794	Mastacembelus_armatus
ENSPMGG00000008120	snrnp48	71	54.854	ENSMGAG00000006037	SNRNP48	69	54.854	Meleagris_gallopavo
ENSPMGG00000008120	snrnp48	95	46.154	ENSMAUG00000011944	Snrnp48	79	46.154	Mesocricetus_auratus
ENSPMGG00000008120	snrnp48	92	47.547	ENSMICG00000012497	SNRNP48	75	47.547	Microcebus_murinus
ENSPMGG00000008120	snrnp48	86	48.996	ENSMOCG00000015555	Snrnp48	73	48.996	Microtus_ochrogaster
ENSPMGG00000008120	snrnp48	66	73.684	ENSMMOG00000003072	-	60	73.684	Mola_mola
ENSPMGG00000008120	snrnp48	91	47.893	ENSMODG00000009996	SNRNP48	70	47.710	Monodelphis_domestica
ENSPMGG00000008120	snrnp48	93	67.557	ENSMALG00000005725	snrnp48	76	67.557	Monopterus_albus
ENSPMGG00000008120	snrnp48	90	48.249	MGP_CAROLIEiJ_G0018441	Snrnp48	74	48.249	Mus_caroli
ENSPMGG00000008120	snrnp48	90	47.860	ENSMUSG00000021431	Snrnp48	74	47.860	Mus_musculus
ENSPMGG00000008120	snrnp48	90	48.638	MGP_PahariEiJ_G0019509	Snrnp48	74	48.638	Mus_pahari
ENSPMGG00000008120	snrnp48	90	47.860	MGP_SPRETEiJ_G0019321	Snrnp48	74	47.860	Mus_spretus
ENSPMGG00000008120	snrnp48	91	48.263	ENSNGAG00000004849	Snrnp48	76	48.263	Nannospalax_galili
ENSPMGG00000008120	snrnp48	92	66.154	ENSNBRG00000012127	snrnp48	75	66.160	Neolamprologus_brichardi
ENSPMGG00000008120	snrnp48	86	48.980	ENSNLEG00000011667	SNRNP48	72	48.980	Nomascus_leucogenys
ENSPMGG00000008120	snrnp48	97	43.636	ENSOPRG00000015471	SNRNP48	79	45.136	Ochotona_princeps
ENSPMGG00000008120	snrnp48	92	66.154	ENSONIG00000001520	snrnp48	75	66.160	Oreochromis_niloticus
ENSPMGG00000008120	snrnp48	64	35.784	ENSOANG00000019888	-	96	36.318	Ornithorhynchus_anatinus
ENSPMGG00000008120	snrnp48	85	48.163	ENSOCUG00000005168	SNRNP48	80	48.583	Oryctolagus_cuniculus
ENSPMGG00000008120	snrnp48	92	63.320	ENSORLG00000015654	snrnp48	77	62.082	Oryzias_latipes
ENSPMGG00000008120	snrnp48	92	62.162	ENSORLG00020015976	snrnp48	65	60.967	Oryzias_latipes_hni
ENSPMGG00000008120	snrnp48	92	63.707	ENSORLG00015022379	snrnp48	66	62.082	Oryzias_latipes_hsok
ENSPMGG00000008120	snrnp48	92	65.637	ENSOMEG00000022007	snrnp48	77	65.299	Oryzias_melastigma
ENSPMGG00000008120	snrnp48	89	47.266	ENSOGAG00000005275	SNRNP48	74	48.571	Otolemur_garnettii
ENSPMGG00000008120	snrnp48	73	50.235	ENSOARG00000017319	SNRNP48	72	50.235	Ovis_aries
ENSPMGG00000008120	snrnp48	86	50.000	ENSPPAG00000032873	SNRNP48	71	50.000	Pan_paniscus
ENSPMGG00000008120	snrnp48	86	48.387	ENSPPRG00000004283	SNRNP48	72	48.387	Panthera_pardus
ENSPMGG00000008120	snrnp48	73	50.943	ENSPTIG00000013502	SNRNP48	72	50.943	Panthera_tigris_altaica
ENSPMGG00000008120	snrnp48	86	50.000	ENSPTRG00000017703	SNRNP48	71	50.000	Pan_troglodytes
ENSPMGG00000008120	snrnp48	86	48.980	ENSPANG00000000771	SNRNP48	72	48.980	Papio_anubis
ENSPMGG00000008120	snrnp48	89	57.769	ENSPKIG00000013703	snrnp48	53	57.874	Paramormyrops_kingsleyae
ENSPMGG00000008120	snrnp48	73	51.659	ENSPSIG00000002213	SNRNP48	66	51.659	Pelodiscus_sinensis
ENSPMGG00000008120	snrnp48	90	49.035	ENSPEMG00000008872	Snrnp48	75	49.035	Peromyscus_maniculatus_bairdii
ENSPMGG00000008120	snrnp48	94	65.672	ENSPFOG00000003578	snrnp48	76	65.672	Poecilia_formosa
ENSPMGG00000008120	snrnp48	85	65.164	ENSPLAG00000002290	snrnp48	98	58.621	Poecilia_latipinna
ENSPMGG00000008120	snrnp48	94	66.415	ENSPMEG00000018033	snrnp48	76	66.415	Poecilia_mexicana
ENSPMGG00000008120	snrnp48	91	67.442	ENSPREG00000018541	snrnp48	80	64.057	Poecilia_reticulata
ENSPMGG00000008120	snrnp48	86	48.980	ENSPPYG00000016209	SNRNP48	72	48.980	Pongo_abelii
ENSPMGG00000008120	snrnp48	85	36.327	ENSPCAG00000011991	SNRNP48	91	36.400	Procavia_capensis
ENSPMGG00000008120	snrnp48	90	46.538	ENSPVAG00000002854	SNRNP48	75	46.538	Pteropus_vampyrus
ENSPMGG00000008120	snrnp48	92	66.538	ENSPNYG00000015399	snrnp48	82	66.540	Pundamilia_nyererei
ENSPMGG00000008120	snrnp48	90	48.249	ENSRNOG00000013756	Snrnp48	75	48.249	Rattus_norvegicus
ENSPMGG00000008120	snrnp48	86	48.980	ENSRBIG00000043856	SNRNP48	77	48.980	Rhinopithecus_bieti
ENSPMGG00000008120	snrnp48	86	48.980	ENSRROG00000043229	SNRNP48	72	48.980	Rhinopithecus_roxellana
ENSPMGG00000008120	snrnp48	86	49.388	ENSSBOG00000019486	SNRNP48	72	49.388	Saimiri_boliviensis_boliviensis
ENSPMGG00000008120	snrnp48	86	50.201	ENSSHAG00000014483	SNRNP48	71	50.201	Sarcophilus_harrisii
ENSPMGG00000008120	snrnp48	89	55.952	ENSSFOG00015006610	snrnp48	61	56.420	Scleropages_formosus
ENSPMGG00000008120	snrnp48	95	65.169	ENSSDUG00000014953	snrnp48	77	65.169	Seriola_dumerili
ENSPMGG00000008120	snrnp48	95	65.543	ENSSLDG00000005989	snrnp48	77	65.543	Seriola_lalandi_dorsalis
ENSPMGG00000008120	snrnp48	74	53.774	ENSSPUG00000006257	SNRNP48	59	54.245	Sphenodon_punctatus
ENSPMGG00000008120	snrnp48	92	67.568	ENSSPAG00000006454	snrnp48	76	67.557	Stegastes_partitus
ENSPMGG00000008120	snrnp48	73	53.589	ENSTGUG00000007575	SNRNP48	71	49.550	Taeniopygia_guttata
ENSPMGG00000008120	snrnp48	92	63.707	ENSTRUG00000007031	snrnp48	77	63.019	Takifugu_rubripes
ENSPMGG00000008120	snrnp48	92	60.618	ENSTNIG00000012977	-	77	60.618	Tetraodon_nigroviridis
ENSPMGG00000008120	snrnp48	86	47.154	ENSTBEG00000015620	SNRNP48	72	47.154	Tupaia_belangeri
ENSPMGG00000008120	snrnp48	85	47.521	ENSTTRG00000016715	SNRNP48	76	46.512	Tursiops_truncatus
ENSPMGG00000008120	snrnp48	86	48.387	ENSUAMG00000003690	SNRNP48	72	48.387	Ursus_americanus
ENSPMGG00000008120	snrnp48	73	50.952	ENSVPAG00000003557	SNRNP48	72	50.952	Vicugna_pacos
ENSPMGG00000008120	snrnp48	92	47.126	ENSVVUG00000004996	SNRNP48	76	47.893	Vulpes_vulpes
ENSPMGG00000008120	snrnp48	86	50.000	ENSXETG00000020447	snrnp48	71	50.000	Xenopus_tropicalis
ENSPMGG00000008120	snrnp48	85	66.116	ENSXCOG00000004478	snrnp48	73	66.116	Xiphophorus_couchianus
ENSPMGG00000008120	snrnp48	94	66.415	ENSXMAG00000013595	snrnp48	76	66.415	Xiphophorus_maculatus