EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMGG00000008838 (Gene tree)
Gene ID: -
Gene Symbol: shq1
Alias: -
Full Name: SHQ1%2C H/ACA ribonucleoprotein assembly factor
Gene Type: protein_coding
Species: Periophthalmus_magnuspinnatus
Status: putative
Strand: Plus strand
Length: 20110 bases
Position: chrKN463051.1:41570-61679
Accession: ZDB-GENE-070112-1412
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMGP00000010672	SHQ1	PF04925.15	1.2e-56	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMGT00000011379	-	1743	-	ENSPMGP00000010672	580 (aa)	-	-

Gene Model

Click here to download ENSPMGG00000008838's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMGG00000008838's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMGG00000008838	shq1	75	59.193	ENSG00000144736	SHQ1	100	72.000	Homo_sapiens
ENSPMGG00000008838	shq1	98	60.833	ENSAPOG00000000397	shq1	98	62.189	Acanthochromis_polyacanthus
ENSPMGG00000008838	shq1	76	56.828	ENSAMEG00000015140	SHQ1	76	58.486	Ailuropoda_melanoleuca
ENSPMGG00000008838	shq1	98	60.672	ENSACIG00000021249	shq1	98	61.008	Amphilophus_citrinellus
ENSPMGG00000008838	shq1	99	63.132	ENSAOCG00000023311	shq1	99	62.276	Amphiprion_ocellaris
ENSPMGG00000008838	shq1	99	62.993	ENSAPEG00000021686	shq1	99	62.295	Amphiprion_percula
ENSPMGG00000008838	shq1	98	64.177	ENSATEG00000008475	shq1	97	63.667	Anabas_testudineus
ENSPMGG00000008838	shq1	73	58.581	ENSAPLG00000013926	SHQ1	86	59.268	Anas_platyrhynchos
ENSPMGG00000008838	shq1	72	58.837	ENSACAG00000014809	SHQ1	64	60.412	Anolis_carolinensis
ENSPMGG00000008838	shq1	91	39.777	ENSANAG00000030500	-	72	44.578	Aotus_nancymaae
ENSPMGG00000008838	shq1	80	56.263	ENSANAG00000029241	SHQ1	77	58.333	Aotus_nancymaae
ENSPMGG00000008838	shq1	100	60.469	ENSACLG00000023077	shq1	99	57.987	Astatotilapia_calliptera
ENSPMGG00000008838	shq1	72	60.471	ENSAMXG00000043822	shq1	74	60.839	Astyanax_mexicanus
ENSPMGG00000008838	shq1	73	58.503	ENSBTAG00000005436	SHQ1	76	59.453	Bos_taurus
ENSPMGG00000008838	shq1	73	30.524	WBGene00021655	Y48A5A.1	92	30.238	Caenorhabditis_elegans
ENSPMGG00000008838	shq1	75	58.520	ENSCJAG00000015131	SHQ1	77	58.108	Callithrix_jacchus
ENSPMGG00000008838	shq1	91	50.267	ENSCAFG00000006434	SHQ1	75	58.447	Canis_familiaris
ENSPMGG00000008838	shq1	91	50.446	ENSCAFG00020016743	SHQ1	75	58.676	Canis_lupus_dingo
ENSPMGG00000008838	shq1	73	59.681	ENSCHIG00000012271	SHQ1	69	59.681	Capra_hircus
ENSPMGG00000008838	shq1	74	57.895	ENSTSYG00000014439	SHQ1	77	57.895	Carlito_syrichta
ENSPMGG00000008838	shq1	83	46.217	ENSCAPG00000009343	SHQ1	64	70.238	Cavia_aperea
ENSPMGG00000008838	shq1	76	56.416	ENSCPOG00000011443	SHQ1	75	57.534	Cavia_porcellus
ENSPMGG00000008838	shq1	75	51.345	ENSCCAG00000027080	SHQ1	75	50.901	Cebus_capucinus
ENSPMGG00000008838	shq1	89	39.771	ENSCCAG00000036087	-	73	44.000	Cebus_capucinus
ENSPMGG00000008838	shq1	75	59.865	ENSCATG00000041238	SHQ1	76	59.459	Cercocebus_atys
ENSPMGG00000008838	shq1	75	57.238	ENSCLAG00000004206	SHQ1	76	57.692	Chinchilla_lanigera
ENSPMGG00000008838	shq1	59	57.983	ENSCSAG00000011514	SHQ1	72	57.465	Chlorocebus_sabaeus
ENSPMGG00000008838	shq1	57	45.797	ENSCHOG00000003273	-	99	45.797	Choloepus_hoffmanni
ENSPMGG00000008838	shq1	73	60.274	ENSCPBG00000006441	SHQ1	71	61.187	Chrysemys_picta_bellii
ENSPMGG00000008838	shq1	66	41.476	ENSCING00000008013	-	95	40.596	Ciona_intestinalis
ENSPMGG00000008838	shq1	66	39.231	ENSCSAVG00000002332	-	98	39.443	Ciona_savignyi
ENSPMGG00000008838	shq1	91	52.035	ENSCANG00000039295	SHQ1	77	59.685	Colobus_angolensis_palliatus
ENSPMGG00000008838	shq1	76	57.489	ENSCGRG00001012583	Shq1	78	57.528	Cricetulus_griseus_chok1gshd
ENSPMGG00000008838	shq1	76	57.489	ENSCGRG00000009849	Shq1	78	57.528	Cricetulus_griseus_crigri
ENSPMGG00000008838	shq1	70	71.394	ENSCSEG00000007829	shq1	99	57.749	Cynoglossus_semilaevis
ENSPMGG00000008838	shq1	98	59.829	ENSCVAG00000020049	shq1	98	59.727	Cyprinodon_variegatus
ENSPMGG00000008838	shq1	73	64.486	ENSDARG00000058522	shq1	73	64.802	Danio_rerio
ENSPMGG00000008838	shq1	91	51.444	ENSDNOG00000033937	SHQ1	77	58.108	Dasypus_novemcinctus
ENSPMGG00000008838	shq1	75	53.007	ENSETEG00000005766	SHQ1	76	52.982	Echinops_telfairi
ENSPMGG00000008838	shq1	63	40.431	ENSEBUG00000005445	shq1	73	42.415	Eptatretus_burgeri
ENSPMGG00000008838	shq1	75	58.744	ENSEASG00005002237	SHQ1	77	58.916	Equus_asinus_asinus
ENSPMGG00000008838	shq1	75	58.969	ENSECAG00000015673	SHQ1	75	59.142	Equus_caballus
ENSPMGG00000008838	shq1	75	58.296	ENSEEUG00000010568	SHQ1	77	58.333	Erinaceus_europaeus
ENSPMGG00000008838	shq1	98	56.155	ENSELUG00000003476	shq1	99	56.931	Esox_lucius
ENSPMGG00000008838	shq1	83	54.217	ENSFCAG00000012781	SHQ1	77	58.314	Felis_catus
ENSPMGG00000008838	shq1	99	49.919	ENSFALG00000013428	SHQ1	100	49.268	Ficedula_albicollis
ENSPMGG00000008838	shq1	75	56.125	ENSFDAG00000005595	SHQ1	67	56.751	Fukomys_damarensis
ENSPMGG00000008838	shq1	98	61.591	ENSFHEG00000017552	shq1	99	60.473	Fundulus_heteroclitus
ENSPMGG00000008838	shq1	66	68.041	ENSGMOG00000007350	shq1	100	68.041	Gadus_morhua
ENSPMGG00000008838	shq1	73	59.404	ENSGALG00000007798	SHQ1	71	59.404	Gallus_gallus
ENSPMGG00000008838	shq1	66	71.392	ENSGACG00000011797	shq1	100	71.392	Gasterosteus_aculeatus
ENSPMGG00000008838	shq1	75	58.969	ENSGGOG00000034818	SHQ1	76	58.559	Gorilla_gorilla
ENSPMGG00000008838	shq1	100	59.701	ENSHBUG00000010857	shq1	99	60.906	Haplochromis_burtoni
ENSPMGG00000008838	shq1	77	55.580	ENSHGLG00000003637	SHQ1	68	56.979	Heterocephalus_glaber_female
ENSPMGG00000008838	shq1	77	55.580	ENSHGLG00100011957	SHQ1	68	56.979	Heterocephalus_glaber_male
ENSPMGG00000008838	shq1	98	59.516	ENSHCOG00000010799	shq1	98	59.931	Hippocampus_comes
ENSPMGG00000008838	shq1	73	63.721	ENSIPUG00000001247	shq1	74	63.953	Ictalurus_punctatus
ENSPMGG00000008838	shq1	92	50.977	ENSSTOG00000010043	SHQ1	98	50.532	Ictidomys_tridecemlineatus
ENSPMGG00000008838	shq1	75	57.271	ENSJJAG00000017611	Shq1	68	70.787	Jaculus_jaculus
ENSPMGG00000008838	shq1	98	61.263	ENSKMAG00000004457	shq1	98	61.054	Kryptolebias_marmoratus
ENSPMGG00000008838	shq1	75	57.173	ENSLACG00000014243	SHQ1	70	56.745	Latimeria_chalumnae
ENSPMGG00000008838	shq1	99	51.746	ENSLOCG00000009970	shq1	76	63.073	Lepisosteus_oculatus
ENSPMGG00000008838	shq1	75	59.641	ENSMFAG00000039148	SHQ1	76	59.234	Macaca_fascicularis
ENSPMGG00000008838	shq1	75	41.497	ENSMFAG00000037396	-	75	40.826	Macaca_fascicularis
ENSPMGG00000008838	shq1	66	57.789	ENSMMUG00000009571	SHQ1	71	57.468	Macaca_mulatta
ENSPMGG00000008838	shq1	75	41.497	ENSMMUG00000021761	-	75	40.826	Macaca_mulatta
ENSPMGG00000008838	shq1	75	59.641	ENSMNEG00000032667	SHQ1	76	59.234	Macaca_nemestrina
ENSPMGG00000008838	shq1	75	59.417	ENSMLEG00000038493	SHQ1	76	59.009	Mandrillus_leucophaeus
ENSPMGG00000008838	shq1	99	60.743	ENSMAMG00000023432	shq1	95	60.743	Mastacembelus_armatus
ENSPMGG00000008838	shq1	100	59.370	ENSMZEG00005008649	shq1	99	60.570	Maylandia_zebra
ENSPMGG00000008838	shq1	99	47.987	ENSMGAG00000009640	SHQ1	72	59.039	Meleagris_gallopavo
ENSPMGG00000008838	shq1	73	59.589	ENSMAUG00000022030	Shq1	72	69.048	Mesocricetus_auratus
ENSPMGG00000008838	shq1	78	56.559	ENSMICG00000009224	SHQ1	75	58.447	Microcebus_murinus
ENSPMGG00000008838	shq1	76	57.428	ENSMOCG00000017836	Shq1	79	57.753	Microtus_ochrogaster
ENSPMGG00000008838	shq1	98	60.102	ENSMMOG00000010569	shq1	99	62.051	Mola_mola
ENSPMGG00000008838	shq1	84	51.961	ENSMODG00000003926	SHQ1	78	56.849	Monodelphis_domestica
ENSPMGG00000008838	shq1	99	63.455	ENSMALG00000008870	shq1	99	63.123	Monopterus_albus
ENSPMGG00000008838	shq1	75	56.222	MGP_CAROLIEiJ_G0028689	Shq1	67	67.857	Mus_caroli
ENSPMGG00000008838	shq1	75	57.494	ENSMUSG00000035378	Shq1	78	57.753	Mus_musculus
ENSPMGG00000008838	shq1	73	58.219	MGP_PahariEiJ_G0022440	Shq1	77	58.314	Mus_pahari
ENSPMGG00000008838	shq1	79	55.187	MGP_SPRETEiJ_G0029717	Shq1	67	70.238	Mus_spretus
ENSPMGG00000008838	shq1	76	57.048	ENSMPUG00000017006	SHQ1	75	58.014	Mustela_putorius_furo
ENSPMGG00000008838	shq1	74	50.790	ENSMLUG00000013539	SHQ1	75	53.788	Myotis_lucifugus
ENSPMGG00000008838	shq1	80	49.257	ENSNGAG00000023317	Shq1	76	52.235	Nannospalax_galili
ENSPMGG00000008838	shq1	83	56.040	ENSNBRG00000024004	shq1	97	57.430	Neolamprologus_brichardi
ENSPMGG00000008838	shq1	91	52.613	ENSNLEG00000002731	SHQ1	76	58.916	Nomascus_leucogenys
ENSPMGG00000008838	shq1	80	37.708	ENSMEUG00000009350	-	80	39.220	Notamacropus_eugenii
ENSPMGG00000008838	shq1	77	56.579	ENSODEG00000009192	SHQ1	71	71.264	Octodon_degus
ENSPMGG00000008838	shq1	100	61.307	ENSONIG00000020264	shq1	98	62.415	Oreochromis_niloticus
ENSPMGG00000008838	shq1	90	50.899	ENSOCUG00000016695	SHQ1	74	58.257	Oryctolagus_cuniculus
ENSPMGG00000008838	shq1	97	59.123	ENSORLG00000023538	shq1	97	58.947	Oryzias_latipes
ENSPMGG00000008838	shq1	97	59.123	ENSORLG00020003697	shq1	97	59.123	Oryzias_latipes_hni
ENSPMGG00000008838	shq1	97	58.596	ENSORLG00015021040	shq1	79	69.284	Oryzias_latipes_hsok
ENSPMGG00000008838	shq1	96	61.032	ENSOMEG00000001225	shq1	97	60.854	Oryzias_melastigma
ENSPMGG00000008838	shq1	91	50.808	ENSOGAG00000003898	SHQ1	77	57.823	Otolemur_garnettii
ENSPMGG00000008838	shq1	73	58.465	ENSOARG00000009547	SHQ1	76	58.239	Ovis_aries
ENSPMGG00000008838	shq1	75	59.417	ENSPPAG00000027714	SHQ1	76	59.142	Pan_paniscus
ENSPMGG00000008838	shq1	91	39.455	ENSPPAG00000043263	-	75	42.955	Pan_paniscus
ENSPMGG00000008838	shq1	78	55.765	ENSPPRG00000004769	SHQ1	76	58.314	Panthera_pardus
ENSPMGG00000008838	shq1	78	54.025	ENSPTIG00000011478	SHQ1	75	56.452	Panthera_tigris_altaica
ENSPMGG00000008838	shq1	91	38.727	ENSPTRG00000048303	-	74	42.045	Pan_troglodytes
ENSPMGG00000008838	shq1	75	59.417	ENSPTRG00000015106	SHQ1	76	59.142	Pan_troglodytes
ENSPMGG00000008838	shq1	75	59.193	ENSPANG00000002881	SHQ1	76	59.459	Papio_anubis
ENSPMGG00000008838	shq1	72	64.941	ENSPKIG00000021517	shq1	76	64.516	Paramormyrops_kingsleyae
ENSPMGG00000008838	shq1	73	59.817	ENSPSIG00000005536	SHQ1	72	59.817	Pelodiscus_sinensis
ENSPMGG00000008838	shq1	73	59.361	ENSPEMG00000000251	Shq1	66	72.289	Peromyscus_maniculatus_bairdii
ENSPMGG00000008838	shq1	73	54.091	ENSPMAG00000005372	shq1	99	53.864	Petromyzon_marinus
ENSPMGG00000008838	shq1	92	60.073	ENSPFOG00000003118	shq1	98	59.672	Poecilia_formosa
ENSPMGG00000008838	shq1	77	56.579	ENSPMEG00000011076	shq1	98	55.677	Poecilia_mexicana
ENSPMGG00000008838	shq1	84	59.759	ENSPREG00000000591	shq1	93	58.669	Poecilia_reticulata
ENSPMGG00000008838	shq1	91	51.681	ENSPPYG00000013717	SHQ1	76	59.368	Pongo_abelii
ENSPMGG00000008838	shq1	76	57.802	ENSPCAG00000009035	SHQ1	77	58.676	Procavia_capensis
ENSPMGG00000008838	shq1	75	57.366	ENSPCOG00000008415	SHQ1	76	58.072	Propithecus_coquereli
ENSPMGG00000008838	shq1	76	56.550	ENSPVAG00000017392	SHQ1	77	57.336	Pteropus_vampyrus
ENSPMGG00000008838	shq1	100	60.302	ENSPNYG00000003878	shq1	99	59.464	Pundamilia_nyererei
ENSPMGG00000008838	shq1	72	65.882	ENSPNAG00000026840	shq1	98	53.542	Pygocentrus_nattereri
ENSPMGG00000008838	shq1	73	58.314	ENSRNOG00000005433	Shq1	73	58.542	Rattus_norvegicus
ENSPMGG00000008838	shq1	91	51.899	ENSRBIG00000026280	SHQ1	76	59.722	Rhinopithecus_bieti
ENSPMGG00000008838	shq1	91	52.035	ENSRROG00000034126	SHQ1	77	59.685	Rhinopithecus_roxellana
ENSPMGG00000008838	shq1	75	53.139	ENSSBOG00000021038	SHQ1	75	52.027	Saimiri_boliviensis_boliviensis
ENSPMGG00000008838	shq1	73	57.666	ENSSHAG00000015077	SHQ1	77	57.437	Sarcophilus_harrisii
ENSPMGG00000008838	shq1	75	65.986	ENSSFOG00015016241	shq1	99	53.638	Scleropages_formosus
ENSPMGG00000008838	shq1	99	63.333	ENSSMAG00000016151	shq1	99	62.833	Scophthalmus_maximus
ENSPMGG00000008838	shq1	99	61.349	ENSSDUG00000011986	shq1	99	61.538	Seriola_dumerili
ENSPMGG00000008838	shq1	99	61.258	ENSSLDG00000013908	shq1	99	61.614	Seriola_lalandi_dorsalis
ENSPMGG00000008838	shq1	95	43.937	ENSSARG00000007119	SHQ1	78	48.299	Sorex_araneus
ENSPMGG00000008838	shq1	58	57.880	ENSSPUG00000011526	-	65	57.880	Sphenodon_punctatus
ENSPMGG00000008838	shq1	73	59.453	ENSSSCG00000011518	SHQ1	76	59.184	Sus_scrofa
ENSPMGG00000008838	shq1	73	61.224	ENSTGUG00000009933	SHQ1	76	61.224	Taeniopygia_guttata
ENSPMGG00000008838	shq1	98	62.544	ENSTRUG00000009446	shq1	98	61.847	Takifugu_rubripes
ENSPMGG00000008838	shq1	69	67.233	ENSTNIG00000007354	shq1	97	65.101	Tetraodon_nigroviridis
ENSPMGG00000008838	shq1	73	58.314	ENSTTRG00000005320	SHQ1	76	58.314	Tursiops_truncatus
ENSPMGG00000008838	shq1	76	58.202	ENSUMAG00000024031	SHQ1	74	59.953	Ursus_maritimus
ENSPMGG00000008838	shq1	70	48.837	ENSVPAG00000004880	SHQ1	73	50.384	Vicugna_pacos
ENSPMGG00000008838	shq1	91	49.911	ENSVVUG00000013906	SHQ1	76	57.788	Vulpes_vulpes
ENSPMGG00000008838	shq1	73	59.259	ENSXETG00000032215	shq1	98	48.241	Xenopus_tropicalis