EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMGG00000008867 (Gene tree)
Gene ID: -
Gene Symbol: prdm12b
Alias: -
Full Name: PR domain containing 12b
Gene Type: protein_coding
Species: Periophthalmus_magnuspinnatus
Status: putative
Strand: Minus strand
Length: 2809 bases
Position: chrKN467987.1:146955-149763
Accession: ZDB-GENE-041114-172
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMGP00000010706	zf-C2H2	PF00096.26	5.3e-13	1	2
ENSPMGP00000010706	zf-C2H2	PF00096.26	5.3e-13	2	2
ENSPMGP00000010706	zf-met	PF12874.7	6.5e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMGT00000011413	-	1107	-	ENSPMGP00000010706	368 (aa)	-	-

Gene Model

Click here to download ENSPMGG00000008867's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMGG00000008867's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMGG00000008867	prdm12b	92	81.924	ENSG00000130711	PRDM12	100	76.330	Homo_sapiens
ENSPMGG00000008867	prdm12b	99	88.542	ENSAPOG00000016051	prdm12b	100	88.281	Acanthochromis_polyacanthus
ENSPMGG00000008867	prdm12b	99	66.048	ENSAPOG00000018234	-	100	65.517	Acanthochromis_polyacanthus
ENSPMGG00000008867	prdm12b	89	83.232	ENSAMEG00000016234	PRDM12	99	83.232	Ailuropoda_melanoleuca
ENSPMGG00000008867	prdm12b	99	89.096	ENSACIG00000019578	prdm12b	100	89.096	Amphilophus_citrinellus
ENSPMGG00000008867	prdm12b	99	78.182	ENSACIG00000005193	-	100	78.385	Amphilophus_citrinellus
ENSPMGG00000008867	prdm12b	99	89.655	ENSAOCG00000015040	prdm12b	100	89.390	Amphiprion_ocellaris
ENSPMGG00000008867	prdm12b	100	73.265	ENSAPEG00000022849	-	100	73.902	Amphiprion_percula
ENSPMGG00000008867	prdm12b	99	90.374	ENSAPEG00000015092	prdm12b	100	90.374	Amphiprion_percula
ENSPMGG00000008867	prdm12b	99	77.519	ENSATEG00000014595	-	96	83.939	Anabas_testudineus
ENSPMGG00000008867	prdm12b	94	81.089	ENSANAG00000020616	PRDM12	97	82.544	Aotus_nancymaae
ENSPMGG00000008867	prdm12b	99	74.937	ENSACLG00000007631	-	100	75.888	Astatotilapia_calliptera
ENSPMGG00000008867	prdm12b	99	87.500	ENSACLG00000011876	prdm12b	100	87.500	Astatotilapia_calliptera
ENSPMGG00000008867	prdm12b	99	81.793	ENSAMXG00000008540	PRDM12	100	80.381	Astyanax_mexicanus
ENSPMGG00000008867	prdm12b	99	82.842	ENSAMXG00000033665	prdm12b	100	82.842	Astyanax_mexicanus
ENSPMGG00000008867	prdm12b	92	82.799	ENSBTAG00000023797	PRDM12	100	77.719	Bos_taurus
ENSPMGG00000008867	prdm12b	92	81.924	ENSCJAG00000020540	PRDM12	100	77.128	Callithrix_jacchus
ENSPMGG00000008867	prdm12b	80	83.333	ENSCAFG00000023076	PRDM12	99	77.576	Canis_familiaris
ENSPMGG00000008867	prdm12b	92	82.507	ENSCAFG00020024046	PRDM12	100	77.480	Canis_lupus_dingo
ENSPMGG00000008867	prdm12b	92	82.507	ENSCHIG00000025005	PRDM12	100	77.249	Capra_hircus
ENSPMGG00000008867	prdm12b	86	83.230	ENSCPOG00000005901	PRDM12	95	83.230	Cavia_porcellus
ENSPMGG00000008867	prdm12b	92	81.924	ENSCCAG00000037485	PRDM12	100	77.688	Cebus_capucinus
ENSPMGG00000008867	prdm12b	92	81.924	ENSCATG00000020327	PRDM12	100	77.688	Cercocebus_atys
ENSPMGG00000008867	prdm12b	91	82.544	ENSCLAG00000005499	PRDM12	90	82.544	Chinchilla_lanigera
ENSPMGG00000008867	prdm12b	92	81.924	ENSCSAG00000014756	PRDM12	100	76.944	Chlorocebus_sabaeus
ENSPMGG00000008867	prdm12b	100	79.891	ENSCPBG00000022628	PRDM12	100	79.348	Chrysemys_picta_bellii
ENSPMGG00000008867	prdm12b	92	82.799	ENSCGRG00001015005	Prdm12	100	76.702	Cricetulus_griseus_chok1gshd
ENSPMGG00000008867	prdm12b	99	87.668	ENSCVAG00000017166	prdm12b	100	88.740	Cyprinodon_variegatus
ENSPMGG00000008867	prdm12b	99	76.410	ENSCVAG00000000944	-	100	77.041	Cyprinodon_variegatus
ENSPMGG00000008867	prdm12b	99	83.871	ENSDARG00000007430	prdm12b	100	83.288	Danio_rerio
ENSPMGG00000008867	prdm12b	92	82.507	ENSDNOG00000042302	PRDM12	99	77.957	Dasypus_novemcinctus
ENSPMGG00000008867	prdm12b	83	65.559	ENSEBUG00000016780	prdm12b	74	66.467	Eptatretus_burgeri
ENSPMGG00000008867	prdm12b	94	81.662	ENSEASG00005008472	PRDM12	100	77.249	Equus_asinus_asinus
ENSPMGG00000008867	prdm12b	94	81.662	ENSECAG00000005933	PRDM12	100	77.249	Equus_caballus
ENSPMGG00000008867	prdm12b	99	83.106	ENSELUG00000013674	PRDM12	100	83.113	Esox_lucius
ENSPMGG00000008867	prdm12b	99	82.620	ENSELUG00000009905	prdm12b	100	81.720	Esox_lucius
ENSPMGG00000008867	prdm12b	92	82.507	ENSFCAG00000043086	PRDM12	100	78.226	Felis_catus
ENSPMGG00000008867	prdm12b	100	79.891	ENSFALG00000001445	PRDM12	89	79.348	Ficedula_albicollis
ENSPMGG00000008867	prdm12b	99	76.531	ENSFHEG00000007746	-	100	74.872	Fundulus_heteroclitus
ENSPMGG00000008867	prdm12b	99	86.400	ENSFHEG00000003944	prdm12b	100	87.467	Fundulus_heteroclitus
ENSPMGG00000008867	prdm12b	99	83.245	ENSGMOG00000011797	prdm12b	100	82.713	Gadus_morhua
ENSPMGG00000008867	prdm12b	100	79.891	ENSGALG00000003895	PRDM12	100	79.348	Gallus_gallus
ENSPMGG00000008867	prdm12b	100	86.508	ENSGAFG00000010827	prdm12b	100	86.170	Gambusia_affinis
ENSPMGG00000008867	prdm12b	100	89.008	ENSGACG00000016713	prdm12b	100	88.472	Gasterosteus_aculeatus
ENSPMGG00000008867	prdm12b	100	79.891	ENSGAGG00000014083	PRDM12	100	79.348	Gopherus_agassizii
ENSPMGG00000008867	prdm12b	92	81.633	ENSGGOG00000010568	PRDM12	100	75.654	Gorilla_gorilla
ENSPMGG00000008867	prdm12b	99	89.037	ENSHBUG00000022878	prdm12b	100	89.037	Haplochromis_burtoni
ENSPMGG00000008867	prdm12b	100	74.747	ENSHBUG00000022537	-	93	75.696	Haplochromis_burtoni
ENSPMGG00000008867	prdm12b	91	82.840	ENSHGLG00000013939	PRDM12	100	77.273	Heterocephalus_glaber_female
ENSPMGG00000008867	prdm12b	89	85.756	ENSHCOG00000003663	prdm12b	100	78.934	Hippocampus_comes
ENSPMGG00000008867	prdm12b	99	74.263	ENSHCOG00000021167	-	100	72.340	Hippocampus_comes
ENSPMGG00000008867	prdm12b	99	83.558	ENSIPUG00000017053	prdm12b	100	83.288	Ictalurus_punctatus
ENSPMGG00000008867	prdm12b	99	79.837	ENSIPUG00000019544	PRDM12	100	79.837	Ictalurus_punctatus
ENSPMGG00000008867	prdm12b	95	81.303	ENSSTOG00000005986	PRDM12	86	83.136	Ictidomys_tridecemlineatus
ENSPMGG00000008867	prdm12b	91	83.136	ENSJJAG00000005424	Prdm12	99	83.136	Jaculus_jaculus
ENSPMGG00000008867	prdm12b	99	79.361	ENSKMAG00000016921	prdm12b	100	79.506	Kryptolebias_marmoratus
ENSPMGG00000008867	prdm12b	94	80.460	ENSKMAG00000021205	-	94	78.977	Kryptolebias_marmoratus
ENSPMGG00000008867	prdm12b	99	88.391	ENSLBEG00000017769	prdm12b	100	88.391	Labrus_bergylta
ENSPMGG00000008867	prdm12b	99	77.023	ENSLBEG00000007776	-	100	77.285	Labrus_bergylta
ENSPMGG00000008867	prdm12b	99	79.837	ENSLACG00000017560	PRDM12	99	78.474	Latimeria_chalumnae
ENSPMGG00000008867	prdm12b	99	81.671	ENSLOCG00000005429	prdm12b	99	81.132	Lepisosteus_oculatus
ENSPMGG00000008867	prdm12b	91	83.680	ENSLAFG00000006979	PRDM12	90	83.086	Loxodonta_africana
ENSPMGG00000008867	prdm12b	100	76.596	ENSMFAG00000040322	PRDM12	100	76.330	Macaca_fascicularis
ENSPMGG00000008867	prdm12b	92	81.924	ENSMNEG00000037234	PRDM12	100	77.688	Macaca_nemestrina
ENSPMGG00000008867	prdm12b	99	90.691	ENSMAMG00000013212	prdm12b	100	90.691	Mastacembelus_armatus
ENSPMGG00000008867	prdm12b	99	72.637	ENSMAMG00000018988	-	100	74.300	Mastacembelus_armatus
ENSPMGG00000008867	prdm12b	99	74.559	ENSMZEG00005000415	PRDM12	100	74.747	Maylandia_zebra
ENSPMGG00000008867	prdm12b	98	79.558	ENSMGAG00000005438	PRDM12	92	85.152	Meleagris_gallopavo
ENSPMGG00000008867	prdm12b	100	78.342	ENSMAUG00000013040	Prdm12	100	78.075	Mesocricetus_auratus
ENSPMGG00000008867	prdm12b	93	81.844	ENSMICG00000015480	PRDM12	91	83.136	Microcebus_murinus
ENSPMGG00000008867	prdm12b	100	78.495	ENSMOCG00000021026	Prdm12	90	83.728	Microtus_ochrogaster
ENSPMGG00000008867	prdm12b	100	78.820	ENSMODG00000012108	PRDM12	100	76.781	Monodelphis_domestica
ENSPMGG00000008867	prdm12b	99	76.613	ENSMALG00000021901	prdm12b	99	76.075	Monopterus_albus
ENSPMGG00000008867	prdm12b	92	82.799	MGP_CAROLIEiJ_G0023414	Prdm12	100	76.903	Mus_caroli
ENSPMGG00000008867	prdm12b	92	82.799	ENSMUSG00000079466	Prdm12	100	76.903	Mus_musculus
ENSPMGG00000008867	prdm12b	92	82.799	MGP_PahariEiJ_G0024871	Prdm12	100	76.903	Mus_pahari
ENSPMGG00000008867	prdm12b	92	82.799	MGP_SPRETEiJ_G0024331	Prdm12	100	76.903	Mus_spretus
ENSPMGG00000008867	prdm12b	90	84.132	ENSNGAG00000018480	Prdm12	100	76.882	Nannospalax_galili
ENSPMGG00000008867	prdm12b	99	73.936	ENSNBRG00000024312	-	100	73.670	Neolamprologus_brichardi
ENSPMGG00000008867	prdm12b	99	88.859	ENSNBRG00000006727	prdm12b	100	88.859	Neolamprologus_brichardi
ENSPMGG00000008867	prdm12b	100	70.430	ENSMEUG00000003828	PRDM12	100	68.519	Notamacropus_eugenii
ENSPMGG00000008867	prdm12b	91	83.136	ENSOPRG00000008680	PRDM12	99	82.840	Ochotona_princeps
ENSPMGG00000008867	prdm12b	94	81.089	ENSODEG00000016282	PRDM12	62	82.840	Octodon_degus
ENSPMGG00000008867	prdm12b	63	77.778	ENSOANG00000001043	PRDM12	100	76.496	Ornithorhynchus_anatinus
ENSPMGG00000008867	prdm12b	83	84.091	ENSOCUG00000008241	PRDM12	96	83.766	Oryctolagus_cuniculus
ENSPMGG00000008867	prdm12b	100	86.089	ENSORLG00000007114	prdm12b	100	85.263	Oryzias_latipes
ENSPMGG00000008867	prdm12b	99	76.471	ENSORLG00000017558	-	100	76.154	Oryzias_latipes
ENSPMGG00000008867	prdm12b	100	86.089	ENSORLG00020019565	prdm12b	100	86.089	Oryzias_latipes_hni
ENSPMGG00000008867	prdm12b	99	76.276	ENSORLG00020013167	-	100	75.959	Oryzias_latipes_hni
ENSPMGG00000008867	prdm12b	99	76.471	ENSORLG00015003435	-	100	76.154	Oryzias_latipes_hsok
ENSPMGG00000008867	prdm12b	100	85.789	ENSORLG00015007621	prdm12b	100	85.789	Oryzias_latipes_hsok
ENSPMGG00000008867	prdm12b	99	77.143	ENSOMEG00000007762	-	100	76.623	Oryzias_melastigma
ENSPMGG00000008867	prdm12b	100	85.714	ENSOMEG00000004134	prdm12b	100	85.379	Oryzias_melastigma
ENSPMGG00000008867	prdm12b	91	83.432	ENSOGAG00000007557	PRDM12	99	83.136	Otolemur_garnettii
ENSPMGG00000008867	prdm12b	79	81.757	ENSPPAG00000031506	-	99	80.464	Pan_paniscus
ENSPMGG00000008867	prdm12b	100	72.043	ENSPPRG00000023024	PRDM12	92	71.774	Panthera_pardus
ENSPMGG00000008867	prdm12b	92	81.924	ENSPTRG00000043324	-	100	75.916	Pan_troglodytes
ENSPMGG00000008867	prdm12b	92	81.924	ENSPTRG00000021475	PRDM12	100	75.916	Pan_troglodytes
ENSPMGG00000008867	prdm12b	92	81.924	ENSPANG00000025967	PRDM12	100	77.688	Papio_anubis
ENSPMGG00000008867	prdm12b	99	82.888	ENSPKIG00000007228	prdm12b	100	82.353	Paramormyrops_kingsleyae
ENSPMGG00000008867	prdm12b	90	81.682	ENSPKIG00000004305	PRDM12	95	81.682	Paramormyrops_kingsleyae
ENSPMGG00000008867	prdm12b	100	80.163	ENSPSIG00000006739	PRDM12	100	79.620	Pelodiscus_sinensis
ENSPMGG00000008867	prdm12b	99	75.515	ENSPMGG00000002356	-	100	75.773	Periophthalmus_magnuspinnatus
ENSPMGG00000008867	prdm12b	92	83.626	ENSPEMG00000009969	Prdm12	90	83.432	Peromyscus_maniculatus_bairdii
ENSPMGG00000008867	prdm12b	100	78.820	ENSPCIG00000024119	PRDM12	100	76.781	Phascolarctos_cinereus
ENSPMGG00000008867	prdm12b	99	87.200	ENSPFOG00000019841	prdm12b	100	85.867	Poecilia_formosa
ENSPMGG00000008867	prdm12b	100	86.544	ENSPLAG00000016626	prdm12b	100	86.016	Poecilia_latipinna
ENSPMGG00000008867	prdm12b	96	86.612	ENSPMEG00000016698	prdm12b	99	86.264	Poecilia_mexicana
ENSPMGG00000008867	prdm12b	95	75.419	ENSPREG00000003211	-	94	74.022	Poecilia_reticulata
ENSPMGG00000008867	prdm12b	100	87.105	ENSPREG00000015073	prdm12b	100	85.789	Poecilia_reticulata
ENSPMGG00000008867	prdm12b	95	80.000	ENSPPYG00000019694	PRDM12	93	82.789	Pongo_abelii
ENSPMGG00000008867	prdm12b	92	82.507	ENSPCOG00000022255	PRDM12	100	77.333	Propithecus_coquereli
ENSPMGG00000008867	prdm12b	92	82.216	ENSPVAG00000001511	PRDM12	100	76.533	Pteropus_vampyrus
ENSPMGG00000008867	prdm12b	99	74.559	ENSPNYG00000013589	-	100	74.747	Pundamilia_nyererei
ENSPMGG00000008867	prdm12b	99	88.564	ENSPNYG00000009607	prdm12b	100	88.564	Pundamilia_nyererei
ENSPMGG00000008867	prdm12b	99	80.000	ENSPNAG00000013396	PRDM12	100	80.267	Pygocentrus_nattereri
ENSPMGG00000008867	prdm12b	99	83.288	ENSPNAG00000024532	prdm12b	100	83.019	Pygocentrus_nattereri
ENSPMGG00000008867	prdm12b	92	82.799	ENSRNOG00000009218	Prdm12	100	76.903	Rattus_norvegicus
ENSPMGG00000008867	prdm12b	88	83.742	ENSRBIG00000042712	PRDM12	91	81.525	Rhinopithecus_bieti
ENSPMGG00000008867	prdm12b	89	83.939	ENSRROG00000043554	PRDM12	100	83.636	Rhinopithecus_roxellana
ENSPMGG00000008867	prdm12b	100	78.610	ENSSHAG00000015972	PRDM12	100	76.579	Sarcophilus_harrisii
ENSPMGG00000008867	prdm12b	99	85.604	ENSSMAG00000003754	prdm12b	100	85.861	Scophthalmus_maximus
ENSPMGG00000008867	prdm12b	99	78.295	ENSSDUG00000019071	-	100	79.221	Seriola_dumerili
ENSPMGG00000008867	prdm12b	99	89.239	ENSSDUG00000023498	prdm12b	100	88.976	Seriola_dumerili
ENSPMGG00000008867	prdm12b	99	89.239	ENSSLDG00000009557	prdm12b	100	88.976	Seriola_lalandi_dorsalis
ENSPMGG00000008867	prdm12b	99	78.049	ENSSLDG00000013562	-	100	77.507	Seriola_lalandi_dorsalis
ENSPMGG00000008867	prdm12b	100	79.891	ENSSPUG00000013424	PRDM12	100	79.891	Sphenodon_punctatus
ENSPMGG00000008867	prdm12b	99	88.889	ENSSPAG00000018824	prdm12b	100	88.889	Stegastes_partitus
ENSPMGG00000008867	prdm12b	99	69.271	ENSSPAG00000022420	-	100	70.573	Stegastes_partitus
ENSPMGG00000008867	prdm12b	92	82.507	ENSSSCG00000005703	PRDM12	100	77.480	Sus_scrofa
ENSPMGG00000008867	prdm12b	99	79.032	ENSTRUG00000013239	-	100	79.032	Takifugu_rubripes
ENSPMGG00000008867	prdm12b	99	88.618	ENSTRUG00000018659	prdm12b	100	88.347	Takifugu_rubripes
ENSPMGG00000008867	prdm12b	100	76.075	ENSTNIG00000005859	-	100	75.806	Tetraodon_nigroviridis
ENSPMGG00000008867	prdm12b	99	87.772	ENSTNIG00000009020	prdm12b	99	87.772	Tetraodon_nigroviridis
ENSPMGG00000008867	prdm12b	92	82.507	ENSUAMG00000009653	PRDM12	91	83.136	Ursus_americanus
ENSPMGG00000008867	prdm12b	91	83.432	ENSVVUG00000027662	PRDM12	78	83.136	Vulpes_vulpes
ENSPMGG00000008867	prdm12b	100	87.166	ENSXCOG00000002836	prdm12b	100	86.631	Xiphophorus_couchianus
ENSPMGG00000008867	prdm12b	99	86.436	ENSXMAG00000005537	prdm12b	100	85.904	Xiphophorus_maculatus
ENSPMGG00000008867	prdm12b	99	74.425	ENSXMAG00000028012	-	100	72.886	Xiphophorus_maculatus