EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMGG00000008925 (Gene tree)
Gene ID: -
Gene Symbol: prpf6
Alias: -
Full Name: PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae)
Gene Type: protein_coding
Species: Periophthalmus_magnuspinnatus
Status: putative
Strand: Minus strand
Length: 6936 bases
Position: chrKN468003.1:144993-151928
Accession: ZDB-GENE-030131-2575
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMGP00000010765	PRP1_N	PF06424.12	6e-52	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMGT00000011477	-	2880	-	ENSPMGP00000010765	959 (aa)	-	-

Gene Model

Click here to download ENSPMGG00000008925's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMGG00000008925's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMGG00000008925	prpf6	96	89.915	ENSG00000101161	PRPF6	100	89.703	Homo_sapiens
ENSPMGG00000008925	prpf6	99	95.661	ENSAPOG00000010395	prpf6	99	95.661	Acanthochromis_polyacanthus
ENSPMGG00000008925	prpf6	96	89.396	ENSAMEG00000001916	PRPF6	99	89.183	Ailuropoda_melanoleuca
ENSPMGG00000008925	prpf6	99	94.318	ENSACIG00000019862	prpf6	99	95.041	Amphilophus_citrinellus
ENSPMGG00000008925	prpf6	99	95.764	ENSAOCG00000012988	prpf6	99	95.764	Amphiprion_ocellaris
ENSPMGG00000008925	prpf6	96	89.570	ENSAPEG00000008301	prpf6	100	90.323	Amphiprion_percula
ENSPMGG00000008925	prpf6	99	95.868	ENSATEG00000005581	prpf6	99	95.868	Anabas_testudineus
ENSPMGG00000008925	prpf6	96	89.915	ENSACAG00000006464	PRPF6	99	86.823	Anolis_carolinensis
ENSPMGG00000008925	prpf6	96	89.915	ENSANAG00000012661	PRPF6	100	89.703	Aotus_nancymaae
ENSPMGG00000008925	prpf6	99	93.905	ENSACLG00000025875	prpf6	99	94.628	Astatotilapia_calliptera
ENSPMGG00000008925	prpf6	97	92.381	ENSAMXG00000001929	prpf6	99	91.385	Astyanax_mexicanus
ENSPMGG00000008925	prpf6	96	90.234	ENSBTAG00000011656	PRPF6	100	90.021	Bos_taurus
ENSPMGG00000008925	prpf6	96	89.915	ENSCJAG00000010616	PRPF6	100	89.703	Callithrix_jacchus
ENSPMGG00000008925	prpf6	96	90.340	ENSCAFG00000013165	PRPF6	100	90.127	Canis_familiaris
ENSPMGG00000008925	prpf6	96	90.340	ENSCAFG00020002050	PRPF6	100	90.127	Canis_lupus_dingo
ENSPMGG00000008925	prpf6	96	90.234	ENSCHIG00000018187	PRPF6	100	90.021	Capra_hircus
ENSPMGG00000008925	prpf6	96	90.127	ENSTSYG00000007814	PRPF6	100	89.915	Carlito_syrichta
ENSPMGG00000008925	prpf6	94	90.622	ENSCAPG00000015077	PRPF6	100	89.858	Cavia_aperea
ENSPMGG00000008925	prpf6	96	90.552	ENSCPOG00000007518	PRPF6	100	90.340	Cavia_porcellus
ENSPMGG00000008925	prpf6	96	87.234	ENSCCAG00000024564	PRPF6	100	87.021	Cebus_capucinus
ENSPMGG00000008925	prpf6	96	90.021	ENSCATG00000037473	PRPF6	100	89.809	Cercocebus_atys
ENSPMGG00000008925	prpf6	96	86.624	ENSCLAG00000003854	PRPF6	100	86.412	Chinchilla_lanigera
ENSPMGG00000008925	prpf6	96	85.338	ENSCSAG00000016742	PRPF6	100	85.127	Chlorocebus_sabaeus
ENSPMGG00000008925	prpf6	81	76.948	ENSCHOG00000003315	-	98	76.733	Choloepus_hoffmanni
ENSPMGG00000008925	prpf6	98	88.877	ENSCPBG00000013964	PRPF6	99	87.807	Chrysemys_picta_bellii
ENSPMGG00000008925	prpf6	96	71.067	ENSCING00000008817	-	99	70.961	Ciona_intestinalis
ENSPMGG00000008925	prpf6	96	89.809	ENSCANG00000038230	PRPF6	100	89.597	Colobus_angolensis_palliatus
ENSPMGG00000008925	prpf6	96	90.552	ENSCGRG00001022666	Prpf6	100	90.340	Cricetulus_griseus_chok1gshd
ENSPMGG00000008925	prpf6	96	89.677	ENSCSEG00000018561	prpf6	100	90.430	Cynoglossus_semilaevis
ENSPMGG00000008925	prpf6	99	93.698	ENSCVAG00000010550	prpf6	99	94.421	Cyprinodon_variegatus
ENSPMGG00000008925	prpf6	99	91.179	ENSDARG00000091367	prpf6	100	93.545	Danio_rerio
ENSPMGG00000008925	prpf6	96	89.915	ENSDNOG00000040544	PRPF6	100	89.809	Dasypus_novemcinctus
ENSPMGG00000008925	prpf6	87	89.965	ENSDORG00000005406	Prpf6	100	90.198	Dipodomys_ordii
ENSPMGG00000008925	prpf6	96	70.430	FBgn0036828	CG6841	99	70.430	Drosophila_melanogaster
ENSPMGG00000008925	prpf6	83	90.511	ENSETEG00000004447	PRPF6	85	90.511	Echinops_telfairi
ENSPMGG00000008925	prpf6	96	83.932	ENSEBUG00000008835	prpf6	100	83.615	Eptatretus_burgeri
ENSPMGG00000008925	prpf6	97	90.000	ENSEASG00005023115	PRPF6	100	90.374	Equus_asinus_asinus
ENSPMGG00000008925	prpf6	96	86.200	ENSECAG00000013983	PRPF6	100	85.987	Equus_caballus
ENSPMGG00000008925	prpf6	86	91.667	ENSEEUG00000000180	PRPF6	81	91.667	Erinaceus_europaeus
ENSPMGG00000008925	prpf6	97	93.220	ENSELUG00000001945	prpf6	96	92.284	Esox_lucius
ENSPMGG00000008925	prpf6	96	90.340	ENSFCAG00000001183	PRPF6	100	90.127	Felis_catus
ENSPMGG00000008925	prpf6	98	82.609	ENSFALG00000006046	-	99	82.816	Ficedula_albicollis
ENSPMGG00000008925	prpf6	96	89.958	ENSFALG00000010326	-	100	88.671	Ficedula_albicollis
ENSPMGG00000008925	prpf6	96	89.373	ENSFDAG00000006451	PRPF6	100	89.160	Fukomys_damarensis
ENSPMGG00000008925	prpf6	100	93.602	ENSFHEG00000000560	prpf6	100	94.324	Fundulus_heteroclitus
ENSPMGG00000008925	prpf6	97	92.373	ENSGMOG00000015622	prpf6	99	92.161	Gadus_morhua
ENSPMGG00000008925	prpf6	96	90.021	ENSGALG00000006001	PRPF6	100	89.915	Gallus_gallus
ENSPMGG00000008925	prpf6	99	88.935	ENSGAFG00000021109	prpf6	99	89.659	Gambusia_affinis
ENSPMGG00000008925	prpf6	97	93.439	ENSGACG00000002576	prpf6	100	94.180	Gasterosteus_aculeatus
ENSPMGG00000008925	prpf6	98	88.970	ENSGAGG00000008653	PRPF6	99	87.910	Gopherus_agassizii
ENSPMGG00000008925	prpf6	96	89.915	ENSGGOG00000016876	PRPF6	100	89.703	Gorilla_gorilla
ENSPMGG00000008925	prpf6	99	93.905	ENSHBUG00000004496	prpf6	99	94.628	Haplochromis_burtoni
ENSPMGG00000008925	prpf6	96	90.446	ENSHGLG00000009222	PRPF6	100	90.234	Heterocephalus_glaber_female
ENSPMGG00000008925	prpf6	94	90.414	ENSHGLG00100016600	PRPF6	100	90.196	Heterocephalus_glaber_male
ENSPMGG00000008925	prpf6	99	93.492	ENSHCOG00000011513	prpf6	99	94.215	Hippocampus_comes
ENSPMGG00000008925	prpf6	100	91.478	ENSIPUG00000004912	prpf6	99	92.197	Ictalurus_punctatus
ENSPMGG00000008925	prpf6	96	88.960	ENSSTOG00000002922	PRPF6	100	88.217	Ictidomys_tridecemlineatus
ENSPMGG00000008925	prpf6	96	90.552	ENSJJAG00000000836	Prpf6	100	90.340	Jaculus_jaculus
ENSPMGG00000008925	prpf6	100	95.361	ENSKMAG00000017800	prpf6	100	95.361	Kryptolebias_marmoratus
ENSPMGG00000008925	prpf6	100	94.948	ENSLBEG00000012582	prpf6	100	94.948	Labrus_bergylta
ENSPMGG00000008925	prpf6	96	92.136	ENSLOCG00000004827	prpf6	100	87.882	Lepisosteus_oculatus
ENSPMGG00000008925	prpf6	96	89.809	ENSLAFG00000005272	PRPF6	100	89.597	Loxodonta_africana
ENSPMGG00000008925	prpf6	96	89.809	ENSMFAG00000037542	PRPF6	100	89.597	Macaca_fascicularis
ENSPMGG00000008925	prpf6	96	84.591	ENSMMUG00000015558	PRPF6	95	91.459	Macaca_mulatta
ENSPMGG00000008925	prpf6	96	78.367	ENSMNEG00000045555	PRPF6	100	78.155	Macaca_nemestrina
ENSPMGG00000008925	prpf6	99	95.455	ENSMAMG00000010718	prpf6	99	95.455	Mastacembelus_armatus
ENSPMGG00000008925	prpf6	97	95.527	ENSMZEG00005015261	-	100	95.527	Maylandia_zebra
ENSPMGG00000008925	prpf6	90	95.434	ENSMZEG00005026539	prpf6	100	95.434	Maylandia_zebra
ENSPMGG00000008925	prpf6	94	90.196	ENSMGAG00000006634	PRPF6	100	90.087	Meleagris_gallopavo
ENSPMGG00000008925	prpf6	96	90.552	ENSMAUG00000013969	Prpf6	100	90.340	Mesocricetus_auratus
ENSPMGG00000008925	prpf6	84	90.158	ENSMICG00000017793	PRPF6	98	90.148	Microcebus_murinus
ENSPMGG00000008925	prpf6	96	90.446	ENSMOCG00000001701	Prpf6	100	90.234	Microtus_ochrogaster
ENSPMGG00000008925	prpf6	96	95.811	ENSMMOG00000020419	prpf6	100	95.811	Mola_mola
ENSPMGG00000008925	prpf6	94	91.245	ENSMODG00000017051	PRPF6	99	90.999	Monodelphis_domestica
ENSPMGG00000008925	prpf6	95	95.765	ENSMALG00000000089	prpf6	100	95.765	Monopterus_albus
ENSPMGG00000008925	prpf6	96	85.394	MGP_CAROLIEiJ_G0024814	Prpf6	100	84.648	Mus_caroli
ENSPMGG00000008925	prpf6	96	90.552	ENSMUSG00000002455	Prpf6	100	90.340	Mus_musculus
ENSPMGG00000008925	prpf6	96	90.552	MGP_PahariEiJ_G0026262	Prpf6	100	90.340	Mus_pahari
ENSPMGG00000008925	prpf6	96	90.552	MGP_SPRETEiJ_G0025741	Prpf6	100	90.340	Mus_spretus
ENSPMGG00000008925	prpf6	87	90.357	ENSMPUG00000008673	PRPF6	99	90.119	Mustela_putorius_furo
ENSPMGG00000008925	prpf6	96	90.658	ENSNGAG00000003365	Prpf6	100	90.446	Nannospalax_galili
ENSPMGG00000008925	prpf6	99	94.008	ENSNBRG00000015025	prpf6	99	94.731	Neolamprologus_brichardi
ENSPMGG00000008925	prpf6	96	89.809	ENSNLEG00000010208	PRPF6	100	89.597	Nomascus_leucogenys
ENSPMGG00000008925	prpf6	96	82.966	ENSMEUG00000009824	-	90	83.235	Notamacropus_eugenii
ENSPMGG00000008925	prpf6	96	84.820	ENSODEG00000004841	PRPF6	100	84.607	Octodon_degus
ENSPMGG00000008925	prpf6	99	93.905	ENSONIG00000017406	prpf6	99	94.628	Oreochromis_niloticus
ENSPMGG00000008925	prpf6	96	90.446	ENSOANG00000004920	PRPF6	100	90.234	Ornithorhynchus_anatinus
ENSPMGG00000008925	prpf6	95	88.210	ENSOCUG00000014151	PRPF6	100	87.996	Oryctolagus_cuniculus
ENSPMGG00000008925	prpf6	100	92.474	ENSORLG00000009592	prpf6	100	93.196	Oryzias_latipes
ENSPMGG00000008925	prpf6	100	92.577	ENSORLG00020001458	prpf6	100	93.299	Oryzias_latipes_hni
ENSPMGG00000008925	prpf6	100	92.577	ENSORLG00015018762	prpf6	100	93.299	Oryzias_latipes_hsok
ENSPMGG00000008925	prpf6	99	93.382	ENSOMEG00000012174	prpf6	99	94.105	Oryzias_melastigma
ENSPMGG00000008925	prpf6	96	83.191	ENSOGAG00000007573	PRPF6	100	82.979	Otolemur_garnettii
ENSPMGG00000008925	prpf6	96	89.809	ENSOARG00000008776	PRPF6	99	89.597	Ovis_aries
ENSPMGG00000008925	prpf6	96	89.915	ENSPPAG00000008686	PRPF6	100	89.703	Pan_paniscus
ENSPMGG00000008925	prpf6	96	90.340	ENSPPRG00000008497	PRPF6	100	90.127	Panthera_pardus
ENSPMGG00000008925	prpf6	94	90.305	ENSPTIG00000011184	PRPF6	97	90.087	Panthera_tigris_altaica
ENSPMGG00000008925	prpf6	96	89.915	ENSPTRG00000013765	PRPF6	100	89.703	Pan_troglodytes
ENSPMGG00000008925	prpf6	96	89.597	ENSPANG00000024135	PRPF6	100	89.384	Papio_anubis
ENSPMGG00000008925	prpf6	98	91.173	ENSPKIG00000005627	prpf6	99	90.966	Paramormyrops_kingsleyae
ENSPMGG00000008925	prpf6	89	90.196	ENSPSIG00000007717	PRPF6	98	90.427	Pelodiscus_sinensis
ENSPMGG00000008925	prpf6	96	90.552	ENSPEMG00000016036	Prpf6	100	90.340	Peromyscus_maniculatus_bairdii
ENSPMGG00000008925	prpf6	97	85.489	ENSPMAG00000006144	prpf6	100	85.594	Petromyzon_marinus
ENSPMGG00000008925	prpf6	96	90.764	ENSPCIG00000017909	PRPF6	100	90.552	Phascolarctos_cinereus
ENSPMGG00000008925	prpf6	99	94.063	ENSPFOG00000006431	prpf6	99	94.063	Poecilia_formosa
ENSPMGG00000008925	prpf6	99	93.905	ENSPLAG00000005974	prpf6	99	94.628	Poecilia_latipinna
ENSPMGG00000008925	prpf6	99	94.008	ENSPMEG00000009977	prpf6	99	94.731	Poecilia_mexicana
ENSPMGG00000008925	prpf6	99	93.595	ENSPREG00000017993	prpf6	95	94.318	Poecilia_reticulata
ENSPMGG00000008925	prpf6	96	89.384	ENSPPYG00000011256	PRPF6	100	89.172	Pongo_abelii
ENSPMGG00000008925	prpf6	91	91.843	ENSPCAG00000006536	PRPF6	88	91.517	Procavia_capensis
ENSPMGG00000008925	prpf6	96	89.809	ENSPCOG00000016881	PRPF6	100	89.597	Propithecus_coquereli
ENSPMGG00000008925	prpf6	96	84.485	ENSPVAG00000014316	PRPF6	100	84.272	Pteropus_vampyrus
ENSPMGG00000008925	prpf6	99	93.429	ENSPNYG00000001939	prpf6	70	93.429	Pundamilia_nyererei
ENSPMGG00000008925	prpf6	97	93.333	ENSPNAG00000015606	prpf6	99	92.615	Pygocentrus_nattereri
ENSPMGG00000008925	prpf6	96	90.446	ENSRNOG00000051498	Prpf6	100	90.234	Rattus_norvegicus
ENSPMGG00000008925	prpf6	96	89.809	ENSRBIG00000043613	PRPF6	100	89.597	Rhinopithecus_bieti
ENSPMGG00000008925	prpf6	96	86.984	ENSRROG00000040969	PRPF6	100	86.772	Rhinopithecus_roxellana
ENSPMGG00000008925	prpf6	86	88.160	ENSSBOG00000020632	PRPF6	90	86.655	Saimiri_boliviensis_boliviensis
ENSPMGG00000008925	prpf6	96	90.764	ENSSHAG00000016810	PRPF6	100	90.552	Sarcophilus_harrisii
ENSPMGG00000008925	prpf6	95	92.803	ENSSFOG00015020859	prpf6	100	92.589	Scleropages_formosus
ENSPMGG00000008925	prpf6	100	93.608	ENSSMAG00000008112	prpf6	100	94.330	Scophthalmus_maximus
ENSPMGG00000008925	prpf6	100	94.639	ENSSDUG00000016142	prpf6	100	95.361	Seriola_dumerili
ENSPMGG00000008925	prpf6	100	94.639	ENSSLDG00000025283	prpf6	99	95.361	Seriola_lalandi_dorsalis
ENSPMGG00000008925	prpf6	89	89.145	ENSSPUG00000018260	PRPF6	98	89.376	Sphenodon_punctatus
ENSPMGG00000008925	prpf6	99	94.421	ENSSPAG00000015850	prpf6	99	95.145	Stegastes_partitus
ENSPMGG00000008925	prpf6	97	88.912	ENSSSCG00000029119	PRPF6	100	89.241	Sus_scrofa
ENSPMGG00000008925	prpf6	96	90.053	ENSTGUG00000007221	PRPF6	100	89.947	Taeniopygia_guttata
ENSPMGG00000008925	prpf6	100	93.608	ENSTRUG00000002920	prpf6	100	94.330	Takifugu_rubripes
ENSPMGG00000008925	prpf6	96	87.792	ENSTNIG00000017873	prpf6	100	88.535	Tetraodon_nigroviridis
ENSPMGG00000008925	prpf6	84	89.444	ENSTBEG00000005348	PRPF6	79	87.778	Tupaia_belangeri
ENSPMGG00000008925	prpf6	96	90.021	ENSTTRG00000013068	PRPF6	100	89.809	Tursiops_truncatus
ENSPMGG00000008925	prpf6	94	88.998	ENSUMAG00000021631	PRPF6	98	88.780	Ursus_maritimus
ENSPMGG00000008925	prpf6	96	90.340	ENSVVUG00000014948	PRPF6	100	90.127	Vulpes_vulpes
ENSPMGG00000008925	prpf6	96	90.542	ENSXETG00000012054	prpf6	99	88.066	Xenopus_tropicalis
ENSPMGG00000008925	prpf6	99	93.905	ENSXCOG00000008082	prpf6	99	94.628	Xiphophorus_couchianus
ENSPMGG00000008925	prpf6	99	93.905	ENSXMAG00000015581	prpf6	99	94.628	Xiphophorus_maculatus