EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMGG00000009073 (Gene tree)
Gene ID: -
Gene Symbol: pabpc4
Alias: -
Full Name: poly(A) binding protein%2C cytoplasmic 4 (inducible form)
Gene Type: protein_coding
Species: Periophthalmus_magnuspinnatus
Status: putative
Strand: Plus strand
Length: 5765 bases
Position: chrKN465386.1:507334-513098
Accession: ZDB-GENE-030131-9663
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMGP00000010942	PABP	PF00658.18	4.9e-31	1	1
ENSPMGP00000010942	RRM_5	PF13893.6	1e-09	1	1
ENSPMGP00000010942	RRM_1	PF00076.22	5.5e-90	1	4
ENSPMGP00000010942	RRM_1	PF00076.22	5.5e-90	2	4
ENSPMGP00000010942	RRM_1	PF00076.22	5.5e-90	3	4
ENSPMGP00000010942	RRM_1	PF00076.22	5.5e-90	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMGT00000011667	-	1809	-	ENSPMGP00000010942	602 (aa)	-	-

Gene Model

Click here to download ENSPMGG00000009073's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMGG00000009073's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMGG00000009073	pabpc4	99	82.419	ENSG00000090621	PABPC4	99	96.396	Homo_sapiens
ENSPMGG00000009073	pabpc4	99	92.382	ENSAPOG00000001161	pabpc4	100	92.332	Acanthochromis_polyacanthus
ENSPMGG00000009073	pabpc4	99	77.039	ENSAMEG00000011535	-	100	76.471	Ailuropoda_melanoleuca
ENSPMGG00000009073	pabpc4	98	50.575	ENSAMEG00000015083	-	99	50.577	Ailuropoda_melanoleuca
ENSPMGG00000009073	pabpc4	100	90.967	ENSACIG00000023343	pabpc4	100	91.601	Amphilophus_citrinellus
ENSPMGG00000009073	pabpc4	99	92.707	ENSAOCG00000021529	pabpc4	100	92.652	Amphiprion_ocellaris
ENSPMGG00000009073	pabpc4	99	92.707	ENSAPEG00000019196	pabpc4	100	92.652	Amphiprion_percula
ENSPMGG00000009073	pabpc4	99	92.071	ENSATEG00000007402	pabpc4	100	92.185	Anabas_testudineus
ENSPMGG00000009073	pabpc4	99	82.205	ENSAPLG00000009729	-	100	82.965	Anas_platyrhynchos
ENSPMGG00000009073	pabpc4	98	81.851	ENSACAG00000002544	PABPC4	100	81.851	Anolis_carolinensis
ENSPMGG00000009073	pabpc4	99	81.319	ENSANAG00000025079	PABPC4	100	81.575	Aotus_nancymaae
ENSPMGG00000009073	pabpc4	100	91.228	ENSACLG00000019558	pabpc4	100	92.026	Astatotilapia_calliptera
ENSPMGG00000009073	pabpc4	99	82.063	ENSAMXG00000018779	pabpc4	99	82.063	Astyanax_mexicanus
ENSPMGG00000009073	pabpc4	99	79.385	ENSBTAG00000017125	PABPC4	100	79.938	Bos_taurus
ENSPMGG00000009073	pabpc4	60	84.431	ENSBTAG00000048536	-	93	84.431	Bos_taurus
ENSPMGG00000009073	pabpc4	73	85.641	ENSCJAG00000045953	-	74	85.641	Callithrix_jacchus
ENSPMGG00000009073	pabpc4	99	81.319	ENSCJAG00000002512	-	100	81.417	Callithrix_jacchus
ENSPMGG00000009073	pabpc4	99	80.818	ENSCAFG00000003081	PABPC4	100	81.732	Canis_familiaris
ENSPMGG00000009073	pabpc4	95	81.414	ENSCAFG00020004161	PABPC4	100	78.012	Canis_lupus_dingo
ENSPMGG00000009073	pabpc4	99	77.039	ENSCHIG00000019398	-	100	76.621	Capra_hircus
ENSPMGG00000009073	pabpc4	99	65.293	ENSCHIG00000023385	-	100	65.293	Capra_hircus
ENSPMGG00000009073	pabpc4	99	81.417	ENSTSYG00000006532	PABPC4	100	81.417	Carlito_syrichta
ENSPMGG00000009073	pabpc4	99	83.361	ENSCAPG00000015984	PABPC4	100	84.959	Cavia_aperea
ENSPMGG00000009073	pabpc4	99	84.091	ENSCPOG00000009552	PABPC4	100	84.578	Cavia_porcellus
ENSPMGG00000009073	pabpc4	99	81.162	ENSCCAG00000037306	PABPC4	100	81.102	Cebus_capucinus
ENSPMGG00000009073	pabpc4	99	81.476	ENSCATG00000042164	PABPC4	100	81.732	Cercocebus_atys
ENSPMGG00000009073	pabpc4	99	81.633	ENSCLAG00000011899	PABPC4	100	81.890	Chinchilla_lanigera
ENSPMGG00000009073	pabpc4	99	77.039	ENSCSAG00000001135	PABPC4	100	72.455	Chlorocebus_sabaeus
ENSPMGG00000009073	pabpc4	90	89.211	ENSCHOG00000005327	PABPC4	80	89.211	Choloepus_hoffmanni
ENSPMGG00000009073	pabpc4	99	83.728	ENSCPBG00000001038	PABPC4	100	83.728	Chrysemys_picta_bellii
ENSPMGG00000009073	pabpc4	98	81.688	ENSCANG00000034177	PABPC4	100	81.949	Colobus_angolensis_palliatus
ENSPMGG00000009073	pabpc4	98	84.551	ENSCGRG00001018166	Pabpc4	100	83.929	Cricetulus_griseus_chok1gshd
ENSPMGG00000009073	pabpc4	97	83.694	ENSCGRG00000009777	Pabpc4	100	83.550	Cricetulus_griseus_crigri
ENSPMGG00000009073	pabpc4	100	90.112	ENSCSEG00000000130	pabpc4	100	90.909	Cynoglossus_semilaevis
ENSPMGG00000009073	pabpc4	98	90.228	ENSCVAG00000019246	pabpc4	99	91.042	Cyprinodon_variegatus
ENSPMGG00000009073	pabpc4	98	88.038	ENSDARG00000059259	pabpc4	100	88.264	Danio_rerio
ENSPMGG00000009073	pabpc4	98	80.142	ENSDNOG00000018444	-	100	80.496	Dasypus_novemcinctus
ENSPMGG00000009073	pabpc4	99	79.630	ENSDORG00000011581	Pabpc4	100	80.062	Dipodomys_ordii
ENSPMGG00000009073	pabpc4	99	90.625	ENSETEG00000018453	-	84	90.625	Echinops_telfairi
ENSPMGG00000009073	pabpc4	84	52.757	ENSETEG00000009172	-	99	53.114	Echinops_telfairi
ENSPMGG00000009073	pabpc4	96	75.122	ENSEBUG00000013782	pabpc4	99	75.000	Eptatretus_burgeri
ENSPMGG00000009073	pabpc4	98	78.020	ENSEBUG00000000992	pabpc4	99	77.349	Eptatretus_burgeri
ENSPMGG00000009073	pabpc4	99	77.039	ENSEASG00005014119	PABPC4	100	75.988	Equus_asinus_asinus
ENSPMGG00000009073	pabpc4	99	77.039	ENSECAG00000009396	PABPC4	100	75.988	Equus_caballus
ENSPMGG00000009073	pabpc4	97	76.471	ENSEEUG00000002962	PABPC4	100	76.807	Erinaceus_europaeus
ENSPMGG00000009073	pabpc4	98	87.580	ENSELUG00000003195	pabpc4	100	86.854	Esox_lucius
ENSPMGG00000009073	pabpc4	99	80.818	ENSFCAG00000015254	-	100	81.732	Felis_catus
ENSPMGG00000009073	pabpc4	99	82.650	ENSFALG00000000543	PABPC4	100	83.254	Ficedula_albicollis
ENSPMGG00000009073	pabpc4	99	76.772	ENSFDAG00000020016	-	100	78.313	Fukomys_damarensis
ENSPMGG00000009073	pabpc4	66	50.851	ENSFDAG00000010581	-	99	49.310	Fukomys_damarensis
ENSPMGG00000009073	pabpc4	99	90.096	ENSFHEG00000007548	pabpc4	100	90.895	Fundulus_heteroclitus
ENSPMGG00000009073	pabpc4	100	86.635	ENSGMOG00000019025	pabpc4	100	87.264	Gadus_morhua
ENSPMGG00000009073	pabpc4	99	82.677	ENSGALG00000003800	PABPC4	100	83.438	Gallus_gallus
ENSPMGG00000009073	pabpc4	99	89.030	ENSGAFG00000018195	pabpc4	98	98.889	Gambusia_affinis
ENSPMGG00000009073	pabpc4	100	88.676	ENSGACG00000007179	pabpc4	100	89.633	Gasterosteus_aculeatus
ENSPMGG00000009073	pabpc4	99	83.596	ENSGAGG00000001888	PABPC4	100	83.596	Gopherus_agassizii
ENSPMGG00000009073	pabpc4	99	81.319	ENSGGOG00000004002	PABPC4	100	81.575	Gorilla_gorilla
ENSPMGG00000009073	pabpc4	100	91.069	ENSHBUG00000020206	pabpc4	100	91.866	Haplochromis_burtoni
ENSPMGG00000009073	pabpc4	99	81.633	ENSHGLG00000011162	PABPC4	100	81.732	Heterocephalus_glaber_female
ENSPMGG00000009073	pabpc4	99	81.633	ENSHGLG00100001580	PABPC4	100	81.732	Heterocephalus_glaber_male
ENSPMGG00000009073	pabpc4	100	89.617	ENSHCOG00000012694	pabpc4	100	90.112	Hippocampus_comes
ENSPMGG00000009073	pabpc4	97	88.226	ENSIPUG00000016620	pabpc4	100	87.855	Ictalurus_punctatus
ENSPMGG00000009073	pabpc4	99	82.581	ENSSTOG00000010416	PABPC4	100	83.522	Ictidomys_tridecemlineatus
ENSPMGG00000009073	pabpc4	99	78.704	ENSJJAG00000007781	Pabpc4	100	78.980	Jaculus_jaculus
ENSPMGG00000009073	pabpc4	99	94.850	ENSKMAG00000013597	pabpc4	100	94.020	Kryptolebias_marmoratus
ENSPMGG00000009073	pabpc4	99	90.851	ENSLBEG00000013654	pabpc4	99	91.493	Labrus_bergylta
ENSPMGG00000009073	pabpc4	99	83.465	ENSLACG00000011907	PABPC4	100	83.912	Latimeria_chalumnae
ENSPMGG00000009073	pabpc4	99	86.299	ENSLOCG00000001877	pabpc4	100	87.244	Lepisosteus_oculatus
ENSPMGG00000009073	pabpc4	99	82.742	ENSLAFG00000000151	PABPC4	100	83.845	Loxodonta_africana
ENSPMGG00000009073	pabpc4	99	81.476	ENSMFAG00000041481	PABPC4	100	81.732	Macaca_fascicularis
ENSPMGG00000009073	pabpc4	99	77.039	ENSMMUG00000007497	PABPC4	100	72.455	Macaca_mulatta
ENSPMGG00000009073	pabpc4	99	81.476	ENSMNEG00000043054	PABPC4	100	81.732	Macaca_nemestrina
ENSPMGG00000009073	pabpc4	99	81.476	ENSMLEG00000040716	PABPC4	100	81.732	Mandrillus_leucophaeus
ENSPMGG00000009073	pabpc4	99	92.071	ENSMAMG00000010025	pabpc4	100	92.026	Mastacembelus_armatus
ENSPMGG00000009073	pabpc4	100	91.069	ENSMZEG00005006141	pabpc4	100	91.866	Maylandia_zebra
ENSPMGG00000009073	pabpc4	98	76.401	ENSMGAG00000005408	PABPC4	100	77.759	Meleagris_gallopavo
ENSPMGG00000009073	pabpc4	72	81.675	ENSMAUG00000001295	-	89	81.675	Mesocricetus_auratus
ENSPMGG00000009073	pabpc4	98	74.233	ENSMAUG00000019763	-	100	74.233	Mesocricetus_auratus
ENSPMGG00000009073	pabpc4	60	80.117	ENSMAUG00000004089	-	92	80.117	Mesocricetus_auratus
ENSPMGG00000009073	pabpc4	98	76.836	ENSMICG00000036729	-	100	76.836	Microcebus_murinus
ENSPMGG00000009073	pabpc4	88	82.214	ENSMICG00000016633	-	100	83.636	Microcebus_murinus
ENSPMGG00000009073	pabpc4	98	83.117	ENSMOCG00000006763	Pabpc4	100	83.200	Microtus_ochrogaster
ENSPMGG00000009073	pabpc4	100	92.985	ENSMMOG00000002363	pabpc4	100	94.127	Mola_mola
ENSPMGG00000009073	pabpc4	62	70.933	ENSMODG00000018051	-	96	70.933	Monodelphis_domestica
ENSPMGG00000009073	pabpc4	97	81.298	ENSMODG00000017657	-	100	80.577	Monodelphis_domestica
ENSPMGG00000009073	pabpc4	99	91.774	ENSMALG00000011017	pabpc4	100	91.256	Monopterus_albus
ENSPMGG00000009073	pabpc4	99	75.680	MGP_CAROLIEiJ_G0026435	-	100	96.454	Mus_caroli
ENSPMGG00000009073	pabpc4	98	72.291	MGP_CAROLIEiJ_G0024864	-	100	72.776	Mus_caroli
ENSPMGG00000009073	pabpc4	99	82.258	ENSMUSG00000011257	Pabpc4	100	94.643	Mus_musculus
ENSPMGG00000009073	pabpc4	98	75.957	MGP_PahariEiJ_G0028765	Pabpc4	100	97.163	Mus_pahari
ENSPMGG00000009073	pabpc4	98	70.844	MGP_SPRETEiJ_G0027415	Pabpc4	100	97.163	Mus_spretus
ENSPMGG00000009073	pabpc4	99	77.190	ENSMPUG00000014414	-	100	76.621	Mustela_putorius_furo
ENSPMGG00000009073	pabpc4	94	45.652	ENSMPUG00000006836	-	100	45.485	Mustela_putorius_furo
ENSPMGG00000009073	pabpc4	99	82.581	ENSMLUG00000012068	PABPC4	100	83.683	Myotis_lucifugus
ENSPMGG00000009073	pabpc4	99	82.581	ENSNGAG00000018292	Pabpc4	100	83.683	Nannospalax_galili
ENSPMGG00000009073	pabpc4	62	98.558	ENSNBRG00000009708	pabpc4	98	98.558	Neolamprologus_brichardi
ENSPMGG00000009073	pabpc4	68	98.193	ENSNBRG00000010047	-	72	98.193	Neolamprologus_brichardi
ENSPMGG00000009073	pabpc4	99	81.476	ENSNLEG00000011928	PABPC4	100	81.732	Nomascus_leucogenys
ENSPMGG00000009073	pabpc4	88	93.651	ENSOPRG00000011984	PABPC4	84	93.651	Ochotona_princeps
ENSPMGG00000009073	pabpc4	99	82.297	ENSODEG00000006592	-	100	82.560	Octodon_degus
ENSPMGG00000009073	pabpc4	98	72.594	ENSODEG00000017434	-	100	72.803	Octodon_degus
ENSPMGG00000009073	pabpc4	55	82.857	ENSODEG00000013457	-	100	82.857	Octodon_degus
ENSPMGG00000009073	pabpc4	100	91.388	ENSONIG00000008176	pabpc4	100	92.026	Oreochromis_niloticus
ENSPMGG00000009073	pabpc4	99	83.728	ENSOANG00000010001	PABPC4	100	83.728	Ornithorhynchus_anatinus
ENSPMGG00000009073	pabpc4	95	77.603	ENSOCUG00000000562	PABPC4	88	75.748	Oryctolagus_cuniculus
ENSPMGG00000009073	pabpc4	99	96.914	ENSORLG00000017479	pabpc4	99	96.914	Oryzias_latipes
ENSPMGG00000009073	pabpc4	99	96.914	ENSORLG00020018644	pabpc4	99	96.914	Oryzias_latipes_hni
ENSPMGG00000009073	pabpc4	99	96.914	ENSORLG00015015042	pabpc4	99	96.914	Oryzias_latipes_hsok
ENSPMGG00000009073	pabpc4	99	90.291	ENSOMEG00000014410	pabpc4	99	90.112	Oryzias_melastigma
ENSPMGG00000009073	pabpc4	99	79.109	ENSOGAG00000004067	PABPC4	100	79.724	Otolemur_garnettii
ENSPMGG00000009073	pabpc4	99	77.039	ENSOARG00000020060	PABPC4	100	76.621	Ovis_aries
ENSPMGG00000009073	pabpc4	99	81.319	ENSPPAG00000043625	PABPC4	100	81.575	Pan_paniscus
ENSPMGG00000009073	pabpc4	99	80.818	ENSPPRG00000024727	PABPC4	100	81.732	Panthera_pardus
ENSPMGG00000009073	pabpc4	99	80.818	ENSPTIG00000005829	PABPC4	100	81.732	Panthera_tigris_altaica
ENSPMGG00000009073	pabpc4	99	81.319	ENSPTRG00000000573	PABPC4	100	81.575	Pan_troglodytes
ENSPMGG00000009073	pabpc4	99	80.818	ENSPANG00000009484	PABPC4	100	81.732	Papio_anubis
ENSPMGG00000009073	pabpc4	100	89.482	ENSPKIG00000025356	pabpc4	100	88.673	Paramormyrops_kingsleyae
ENSPMGG00000009073	pabpc4	99	84.069	ENSPSIG00000016892	PABPC4	100	84.069	Pelodiscus_sinensis
ENSPMGG00000009073	pabpc4	99	81.348	ENSPEMG00000023569	-	100	81.447	Peromyscus_maniculatus_bairdii
ENSPMGG00000009073	pabpc4	99	78.125	ENSPEMG00000024193	-	100	78.717	Peromyscus_maniculatus_bairdii
ENSPMGG00000009073	pabpc4	88	73.171	ENSPMAG00000002836	pabpc4	100	73.124	Petromyzon_marinus
ENSPMGG00000009073	pabpc4	95	71.008	ENSPMAG00000007885	pabpc4	100	70.408	Petromyzon_marinus
ENSPMGG00000009073	pabpc4	97	83.923	ENSPCIG00000020674	PABPC4	100	84.119	Phascolarctos_cinereus
ENSPMGG00000009073	pabpc4	99	89.936	ENSPFOG00000002682	pabpc4	100	90.735	Poecilia_formosa
ENSPMGG00000009073	pabpc4	99	89.776	ENSPLAG00000010112	pabpc4	100	90.575	Poecilia_latipinna
ENSPMGG00000009073	pabpc4	98	90.584	ENSPMEG00000019739	pabpc4	100	90.575	Poecilia_mexicana
ENSPMGG00000009073	pabpc4	99	89.776	ENSPREG00000001589	pabpc4	100	90.575	Poecilia_reticulata
ENSPMGG00000009073	pabpc4	99	76.888	ENSPPYG00000001506	PABPC4	100	72.305	Pongo_abelii
ENSPMGG00000009073	pabpc4	99	72.356	ENSPCAG00000003341	PABPC4	100	71.795	Procavia_capensis
ENSPMGG00000009073	pabpc4	98	65.278	ENSPCOG00000025882	-	100	66.138	Propithecus_coquereli
ENSPMGG00000009073	pabpc4	99	81.348	ENSPCOG00000023725	-	100	81.918	Propithecus_coquereli
ENSPMGG00000009073	pabpc4	98	76.510	ENSPVAG00000002187	PABPC4	100	75.084	Pteropus_vampyrus
ENSPMGG00000009073	pabpc4	100	91.228	ENSPNYG00000006134	pabpc4	100	92.026	Pundamilia_nyererei
ENSPMGG00000009073	pabpc4	99	88.394	ENSPNAG00000024355	pabpc4	99	89.189	Pygocentrus_nattereri
ENSPMGG00000009073	pabpc4	99	79.353	ENSRNOG00000015642	Pabpc4	100	79.444	Rattus_norvegicus
ENSPMGG00000009073	pabpc4	99	77.196	ENSRNOG00000028592	AABR07035074.1	100	77.280	Rattus_norvegicus
ENSPMGG00000009073	pabpc4	99	81.476	ENSRBIG00000039761	PABPC4	100	81.732	Rhinopithecus_bieti
ENSPMGG00000009073	pabpc4	99	81.476	ENSRROG00000033355	PABPC4	100	81.732	Rhinopithecus_roxellana
ENSPMGG00000009073	pabpc4	99	80.503	ENSSBOG00000026193	PABPC4	100	81.102	Saimiri_boliviensis_boliviensis
ENSPMGG00000009073	pabpc4	97	83.923	ENSSHAG00000018139	PABPC4	100	83.123	Sarcophilus_harrisii
ENSPMGG00000009073	pabpc4	99	87.255	ENSSFOG00015023514	pabpc4	99	87.255	Scleropages_formosus
ENSPMGG00000009073	pabpc4	99	90.271	ENSSMAG00000009007	pabpc4	100	91.069	Scophthalmus_maximus
ENSPMGG00000009073	pabpc4	99	92.071	ENSSDUG00000012683	pabpc4	100	92.344	Seriola_dumerili
ENSPMGG00000009073	pabpc4	99	92.071	ENSSLDG00000013025	pabpc4	100	92.344	Seriola_lalandi_dorsalis
ENSPMGG00000009073	pabpc4	99	70.695	ENSSARG00000000310	PABPC4	100	66.018	Sorex_araneus
ENSPMGG00000009073	pabpc4	99	84.579	ENSSPUG00000003204	PABPC4	100	84.554	Sphenodon_punctatus
ENSPMGG00000009073	pabpc4	99	92.243	ENSSPAG00000009252	pabpc4	100	92.026	Stegastes_partitus
ENSPMGG00000009073	pabpc4	88	45.981	ENSSSCG00000036170	-	96	43.929	Sus_scrofa
ENSPMGG00000009073	pabpc4	99	80.818	ENSSSCG00000003660	-	100	81.732	Sus_scrofa
ENSPMGG00000009073	pabpc4	99	78.228	ENSTGUG00000001266	PABPC4	99	80.030	Taeniopygia_guttata
ENSPMGG00000009073	pabpc4	100	89.633	ENSTRUG00000005907	pabpc4	100	90.431	Takifugu_rubripes
ENSPMGG00000009073	pabpc4	100	87.279	ENSTNIG00000016902	pabpc4	100	86.634	Tetraodon_nigroviridis
ENSPMGG00000009073	pabpc4	93	81.600	ENSTBEG00000009035	PABPC4	100	64.430	Tupaia_belangeri
ENSPMGG00000009073	pabpc4	98	55.496	ENSTTRG00000014340	PABPC4	100	64.214	Tursiops_truncatus
ENSPMGG00000009073	pabpc4	99	80.818	ENSUAMG00000000303	PABPC4	100	81.575	Ursus_americanus
ENSPMGG00000009073	pabpc4	99	83.306	ENSUMAG00000019585	PABPC4	100	83.306	Ursus_maritimus
ENSPMGG00000009073	pabpc4	74	70.206	ENSVPAG00000010041	PABPC4	60	70.206	Vicugna_pacos
ENSPMGG00000009073	pabpc4	99	80.818	ENSVVUG00000005215	PABPC4	100	81.732	Vulpes_vulpes
ENSPMGG00000009073	pabpc4	70	96.429	ENSXETG00000027221	-	100	96.429	Xenopus_tropicalis
ENSPMGG00000009073	pabpc4	98	80.032	ENSXETG00000010946	pabpc4	99	80.351	Xenopus_tropicalis
ENSPMGG00000009073	pabpc4	99	88.649	ENSXCOG00000013190	pabpc4	96	95.755	Xiphophorus_couchianus
ENSPMGG00000009073	pabpc4	99	89.776	ENSXMAG00000019007	pabpc4	100	90.575	Xiphophorus_maculatus