EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMGG00000010286 (Gene tree)
Gene ID: -
Gene Symbol: cmss1
Alias: -
Full Name: cms1 ribosomal small subunit homolog
Gene Type: protein_coding
Species: Periophthalmus_magnuspinnatus
Status: putative
Strand: Minus strand
Length: 1642 bases
Position: chrKN462133.1:177935-179576
Accession: ZDB-GENE-041010-146
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMGP00000012466	CMS1	PF14617.6	2.3e-31	1	1
ENSPMGP00000012466	DEAD	PF00270.29	1.3e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMGT00000013305	-	687	-	ENSPMGP00000012466	228 (aa)	-	-

Gene Model

Click here to download ENSPMGG00000010286's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMGG00000010286's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMGG00000010286	cmss1	87	60.591	ENSG00000184220	CMSS1	98	61.250	Homo_sapiens
ENSPMGG00000010286	cmss1	88	81.863	ENSAPOG00000010604	cmss1	82	81.863	Acanthochromis_polyacanthus
ENSPMGG00000010286	cmss1	87	61.275	ENSAMEG00000004092	CMSS1	78	61.275	Ailuropoda_melanoleuca
ENSPMGG00000010286	cmss1	88	70.588	ENSACIG00000021854	cmss1	84	65.517	Amphilophus_citrinellus
ENSPMGG00000010286	cmss1	88	80.882	ENSAOCG00000013361	cmss1	70	80.882	Amphiprion_ocellaris
ENSPMGG00000010286	cmss1	88	80.882	ENSAPEG00000005829	cmss1	70	80.882	Amphiprion_percula
ENSPMGG00000010286	cmss1	89	78.537	ENSATEG00000008209	cmss1	74	78.218	Anabas_testudineus
ENSPMGG00000010286	cmss1	87	63.054	ENSAPLG00000010542	CMSS1	88	63.054	Anas_platyrhynchos
ENSPMGG00000010286	cmss1	87	62.069	ENSACAG00000011065	CMSS1	74	62.069	Anolis_carolinensis
ENSPMGG00000010286	cmss1	87	60.099	ENSANAG00000023565	CMSS1	84	56.637	Aotus_nancymaae
ENSPMGG00000010286	cmss1	88	78.431	ENSACLG00000027294	cmss1	77	71.983	Astatotilapia_calliptera
ENSPMGG00000010286	cmss1	86	65.174	ENSAMXG00000002046	cmss1	69	65.686	Astyanax_mexicanus
ENSPMGG00000010286	cmss1	87	60.099	ENSBTAG00000013663	CMSS1	73	60.099	Bos_taurus
ENSPMGG00000010286	cmss1	87	61.084	ENSCJAG00000000610	CMSS1	84	57.965	Callithrix_jacchus
ENSPMGG00000010286	cmss1	87	62.562	ENSCAFG00000009230	CMSS1	73	62.562	Canis_familiaris
ENSPMGG00000010286	cmss1	87	62.562	ENSCAFG00020009464	-	74	62.562	Canis_lupus_dingo
ENSPMGG00000010286	cmss1	81	65.054	ENSCAFG00020024156	-	58	65.054	Canis_lupus_dingo
ENSPMGG00000010286	cmss1	87	60.099	ENSCHIG00000013003	CMSS1	73	60.099	Capra_hircus
ENSPMGG00000010286	cmss1	87	62.562	ENSTSYG00000009266	CMSS1	78	62.562	Carlito_syrichta
ENSPMGG00000010286	cmss1	80	55.319	ENSCAPG00000013584	CMSS1	87	55.319	Cavia_aperea
ENSPMGG00000010286	cmss1	86	62.687	ENSCPOG00000014680	CMSS1	72	63.054	Cavia_porcellus
ENSPMGG00000010286	cmss1	87	61.576	ENSCCAG00000034685	CMSS1	84	57.965	Cebus_capucinus
ENSPMGG00000010286	cmss1	100	57.627	ENSCATG00000031980	CMSS1	90	56.250	Cercocebus_atys
ENSPMGG00000010286	cmss1	86	60.199	ENSCLAG00000011241	CMSS1	87	60.591	Chinchilla_lanigera
ENSPMGG00000010286	cmss1	100	56.356	ENSCSAG00000006024	CMSS1	96	56.250	Chlorocebus_sabaeus
ENSPMGG00000010286	cmss1	86	43.000	ENSCHOG00000012098	CMSS1	73	43.564	Choloepus_hoffmanni
ENSPMGG00000010286	cmss1	83	45.178	ENSCING00000014848	-	99	45.745	Ciona_intestinalis
ENSPMGG00000010286	cmss1	54	44.882	ENSCSAVG00000002309	-	99	44.882	Ciona_savignyi
ENSPMGG00000010286	cmss1	100	56.356	ENSCANG00000031337	CMSS1	90	56.250	Colobus_angolensis_palliatus
ENSPMGG00000010286	cmss1	100	55.508	ENSCGRG00001014305	Cmss1	85	55.508	Cricetulus_griseus_chok1gshd
ENSPMGG00000010286	cmss1	100	55.932	ENSCGRG00000006722	Cmss1	91	55.508	Cricetulus_griseus_crigri
ENSPMGG00000010286	cmss1	88	75.980	ENSCSEG00000004958	cmss1	69	75.980	Cynoglossus_semilaevis
ENSPMGG00000010286	cmss1	88	77.451	ENSCVAG00000005039	cmss1	70	77.451	Cyprinodon_variegatus
ENSPMGG00000010286	cmss1	98	65.789	ENSDARG00000112579	cmss1	78	65.789	Danio_rerio
ENSPMGG00000010286	cmss1	87	62.069	ENSDNOG00000040418	CMSS1	73	62.069	Dasypus_novemcinctus
ENSPMGG00000010286	cmss1	86	61.692	ENSDORG00000010461	Cmss1	72	62.069	Dipodomys_ordii
ENSPMGG00000010286	cmss1	52	55.462	ENSEBUG00000002156	-	86	55.462	Eptatretus_burgeri
ENSPMGG00000010286	cmss1	86	60.199	ENSEASG00005010966	CMSS1	92	60.591	Equus_asinus_asinus
ENSPMGG00000010286	cmss1	86	59.701	ENSECAG00000015662	CMSS1	89	60.099	Equus_caballus
ENSPMGG00000010286	cmss1	86	42.289	ENSEEUG00000007624	-	79	41.892	Erinaceus_europaeus
ENSPMGG00000010286	cmss1	88	72.549	ENSELUG00000019459	cmss1	68	72.549	Esox_lucius
ENSPMGG00000010286	cmss1	86	62.189	ENSFCAG00000044577	CMSS1	72	62.562	Felis_catus
ENSPMGG00000010286	cmss1	97	61.062	ENSFALG00000005816	CMSS1	93	59.735	Ficedula_albicollis
ENSPMGG00000010286	cmss1	87	63.054	ENSFDAG00000012577	CMSS1	89	63.054	Fukomys_damarensis
ENSPMGG00000010286	cmss1	99	73.799	ENSFHEG00000012008	cmss1	92	71.739	Fundulus_heteroclitus
ENSPMGG00000010286	cmss1	88	74.510	ENSGMOG00000016729	cmss1	73	74.510	Gadus_morhua
ENSPMGG00000010286	cmss1	87	64.039	ENSGALG00000015267	CMSS1	77	64.039	Gallus_gallus
ENSPMGG00000010286	cmss1	89	76.923	ENSGAFG00000021217	cmss1	77	76.471	Gambusia_affinis
ENSPMGG00000010286	cmss1	88	73.529	ENSGACG00000002798	cmss1	73	73.529	Gasterosteus_aculeatus
ENSPMGG00000010286	cmss1	87	61.084	ENSGAGG00000019861	CMSS1	79	61.084	Gopherus_agassizii
ENSPMGG00000010286	cmss1	87	61.084	ENSGGOG00000014125	CMSS1	85	57.522	Gorilla_gorilla
ENSPMGG00000010286	cmss1	88	77.941	ENSHBUG00000008431	cmss1	72	77.941	Haplochromis_burtoni
ENSPMGG00000010286	cmss1	86	62.189	ENSHGLG00000019481	CMSS1	82	62.562	Heterocephalus_glaber_female
ENSPMGG00000010286	cmss1	86	62.189	ENSHGLG00100010314	CMSS1	81	62.562	Heterocephalus_glaber_male
ENSPMGG00000010286	cmss1	88	77.941	ENSHCOG00000003222	cmss1	69	77.941	Hippocampus_comes
ENSPMGG00000010286	cmss1	88	71.078	ENSIPUG00000011591	cmss1	70	71.078	Ictalurus_punctatus
ENSPMGG00000010286	cmss1	87	60.099	ENSSTOG00000019366	CMSS1	73	60.099	Ictidomys_tridecemlineatus
ENSPMGG00000010286	cmss1	88	61.463	ENSJJAG00000014894	Cmss1	90	61.576	Jaculus_jaculus
ENSPMGG00000010286	cmss1	99	62.348	ENSKMAG00000002390	cmss1	82	70.098	Kryptolebias_marmoratus
ENSPMGG00000010286	cmss1	88	76.098	ENSLBEG00000006298	cmss1	83	76.098	Labrus_bergylta
ENSPMGG00000010286	cmss1	87	63.054	ENSLACG00000009293	CMSS1	88	63.054	Latimeria_chalumnae
ENSPMGG00000010286	cmss1	87	60.099	ENSLOCG00000009391	cmss1	71	60.099	Lepisosteus_oculatus
ENSPMGG00000010286	cmss1	86	60.697	ENSLAFG00000017509	CMSS1	89	61.084	Loxodonta_africana
ENSPMGG00000010286	cmss1	100	57.203	ENSMFAG00000045006	CMSS1	90	55.833	Macaca_fascicularis
ENSPMGG00000010286	cmss1	100	56.780	ENSMMUG00000002939	CMSS1	91	58.852	Macaca_mulatta
ENSPMGG00000010286	cmss1	100	57.203	ENSMNEG00000031315	CMSS1	90	55.833	Macaca_nemestrina
ENSPMGG00000010286	cmss1	100	57.203	ENSMLEG00000033660	CMSS1	90	55.833	Mandrillus_leucophaeus
ENSPMGG00000010286	cmss1	88	81.863	ENSMAMG00000017176	cmss1	77	75.758	Mastacembelus_armatus
ENSPMGG00000010286	cmss1	88	78.431	ENSMZEG00005021886	cmss1	77	71.983	Maylandia_zebra
ENSPMGG00000010286	cmss1	87	64.039	ENSMGAG00000014360	CMSS1	89	64.039	Meleagris_gallopavo
ENSPMGG00000010286	cmss1	100	40.254	ENSMAUG00000020609	Cmss1	81	39.831	Mesocricetus_auratus
ENSPMGG00000010286	cmss1	86	62.189	ENSMICG00000048977	CMSS1	78	62.562	Microcebus_murinus
ENSPMGG00000010286	cmss1	99	57.265	ENSMOCG00000021937	Cmss1	85	57.692	Microtus_ochrogaster
ENSPMGG00000010286	cmss1	88	76.355	ENSMMOG00000019794	cmss1	84	76.355	Mola_mola
ENSPMGG00000010286	cmss1	87	63.054	ENSMODG00000002275	CMSS1	76	63.054	Monodelphis_domestica
ENSPMGG00000010286	cmss1	88	81.373	ENSMALG00000004250	cmss1	70	81.373	Monopterus_albus
ENSPMGG00000010286	cmss1	99	58.051	MGP_CAROLIEiJ_G0020824	Cmss1	85	57.203	Mus_caroli
ENSPMGG00000010286	cmss1	99	57.203	ENSMUSG00000022748	Cmss1	85	56.356	Mus_musculus
ENSPMGG00000010286	cmss1	99	57.447	MGP_PahariEiJ_G0016524	Cmss1	85	57.447	Mus_pahari
ENSPMGG00000010286	cmss1	99	57.203	MGP_SPRETEiJ_G0021724	Cmss1	85	56.356	Mus_spretus
ENSPMGG00000010286	cmss1	86	61.000	ENSMPUG00000011324	CMSS1	78	61.386	Mustela_putorius_furo
ENSPMGG00000010286	cmss1	100	57.143	ENSMLUG00000001131	CMSS1	90	57.143	Myotis_lucifugus
ENSPMGG00000010286	cmss1	100	56.356	ENSNGAG00000020316	Cmss1	84	56.356	Nannospalax_galili
ENSPMGG00000010286	cmss1	88	77.941	ENSNBRG00000003095	cmss1	77	71.552	Neolamprologus_brichardi
ENSPMGG00000010286	cmss1	86	61.194	ENSNLEG00000034172	CMSS1	90	57.203	Nomascus_leucogenys
ENSPMGG00000010286	cmss1	64	67.808	ENSMEUG00000014505	CMSS1	64	67.808	Notamacropus_eugenii
ENSPMGG00000010286	cmss1	87	61.576	ENSOPRG00000002986	CMSS1	73	61.576	Ochotona_princeps
ENSPMGG00000010286	cmss1	86	61.194	ENSODEG00000005226	-	72	61.576	Octodon_degus
ENSPMGG00000010286	cmss1	87	59.606	ENSODEG00000003558	-	75	59.606	Octodon_degus
ENSPMGG00000010286	cmss1	87	54.187	ENSODEG00000001853	-	71	54.187	Octodon_degus
ENSPMGG00000010286	cmss1	97	50.893	ENSODEG00000009446	-	87	50.893	Octodon_degus
ENSPMGG00000010286	cmss1	88	78.431	ENSONIG00000006678	cmss1	88	73.160	Oreochromis_niloticus
ENSPMGG00000010286	cmss1	97	59.292	ENSOANG00000007529	CMSS1	97	59.292	Ornithorhynchus_anatinus
ENSPMGG00000010286	cmss1	87	60.591	ENSOCUG00000025366	CMSS1	73	60.591	Oryctolagus_cuniculus
ENSPMGG00000010286	cmss1	88	77.941	ENSORLG00000020340	cmss1	71	77.941	Oryzias_latipes
ENSPMGG00000010286	cmss1	100	65.086	ENSORLG00020012235	cmss1	86	69.118	Oryzias_latipes_hni
ENSPMGG00000010286	cmss1	88	69.608	ENSORLG00015015551	cmss1	76	69.608	Oryzias_latipes_hsok
ENSPMGG00000010286	cmss1	88	77.941	ENSOMEG00000012555	cmss1	70	77.941	Oryzias_melastigma
ENSPMGG00000010286	cmss1	87	62.562	ENSOGAG00000002045	CMSS1	89	62.562	Otolemur_garnettii
ENSPMGG00000010286	cmss1	87	59.804	ENSOARG00000017899	CMSS1	70	59.804	Ovis_aries
ENSPMGG00000010286	cmss1	87	61.084	ENSPPAG00000038515	CMSS1	81	57.522	Pan_paniscus
ENSPMGG00000010286	cmss1	86	62.189	ENSPPRG00000016767	CMSS1	72	62.562	Panthera_pardus
ENSPMGG00000010286	cmss1	86	62.189	ENSPTIG00000018274	CMSS1	72	62.562	Panthera_tigris_altaica
ENSPMGG00000010286	cmss1	87	61.084	ENSPTRG00000015157	CMSS1	90	57.522	Pan_troglodytes
ENSPMGG00000010286	cmss1	87	61.576	ENSPANG00000019980	CMSS1	88	57.965	Papio_anubis
ENSPMGG00000010286	cmss1	88	72.549	ENSPKIG00000012609	cmss1	75	72.549	Paramormyrops_kingsleyae
ENSPMGG00000010286	cmss1	87	62.562	ENSPSIG00000003849	CMSS1	88	62.562	Pelodiscus_sinensis
ENSPMGG00000010286	cmss1	100	58.051	ENSPEMG00000016384	Cmss1	84	57.203	Peromyscus_maniculatus_bairdii
ENSPMGG00000010286	cmss1	88	50.732	ENSPMAG00000001146	cmss1	99	50.980	Petromyzon_marinus
ENSPMGG00000010286	cmss1	87	63.054	ENSPCIG00000015656	CMSS1	77	63.054	Phascolarctos_cinereus
ENSPMGG00000010286	cmss1	88	75.980	ENSPFOG00000016849	cmss1	71	75.980	Poecilia_formosa
ENSPMGG00000010286	cmss1	88	75.490	ENSPLAG00000008323	cmss1	71	75.490	Poecilia_latipinna
ENSPMGG00000010286	cmss1	88	75.490	ENSPMEG00000021020	cmss1	70	75.490	Poecilia_mexicana
ENSPMGG00000010286	cmss1	99	71.616	ENSPREG00000007618	cmss1	69	75.000	Poecilia_reticulata
ENSPMGG00000010286	cmss1	87	61.576	ENSPPYG00000013606	CMSS1	81	57.965	Pongo_abelii
ENSPMGG00000010286	cmss1	86	61.692	ENSPCOG00000020035	CMSS1	78	62.069	Propithecus_coquereli
ENSPMGG00000010286	cmss1	63	63.889	ENSPVAG00000017031	CMSS1	52	64.384	Pteropus_vampyrus
ENSPMGG00000010286	cmss1	78	80.899	ENSPNYG00000013428	cmss1	65	80.899	Pundamilia_nyererei
ENSPMGG00000010286	cmss1	88	67.647	ENSPNAG00000007912	cmss1	77	65.385	Pygocentrus_nattereri
ENSPMGG00000010286	cmss1	99	58.051	ENSRNOG00000027888	Cmss1	91	57.203	Rattus_norvegicus
ENSPMGG00000010286	cmss1	100	57.203	ENSRBIG00000037931	CMSS1	90	55.833	Rhinopithecus_bieti
ENSPMGG00000010286	cmss1	100	57.203	ENSRROG00000042910	CMSS1	90	55.833	Rhinopithecus_roxellana
ENSPMGG00000010286	cmss1	87	60.591	ENSSBOG00000030980	CMSS1	84	57.080	Saimiri_boliviensis_boliviensis
ENSPMGG00000010286	cmss1	87	63.547	ENSSHAG00000009321	CMSS1	80	63.547	Sarcophilus_harrisii
ENSPMGG00000010286	cmss1	88	76.471	ENSSFOG00015001509	cmss1	70	76.471	Scleropages_formosus
ENSPMGG00000010286	cmss1	88	79.412	ENSSMAG00000001653	cmss1	70	79.412	Scophthalmus_maximus
ENSPMGG00000010286	cmss1	88	82.843	ENSSDUG00000007719	cmss1	70	82.843	Seriola_dumerili
ENSPMGG00000010286	cmss1	89	82.692	ENSSLDG00000012300	cmss1	68	82.843	Seriola_lalandi_dorsalis
ENSPMGG00000010286	cmss1	64	60.959	ENSSARG00000003584	CMSS1	52	60.959	Sorex_araneus
ENSPMGG00000010286	cmss1	97	57.522	ENSSPUG00000003865	CMSS1	98	56.388	Sphenodon_punctatus
ENSPMGG00000010286	cmss1	89	83.092	ENSSPAG00000019182	cmss1	63	82.843	Stegastes_partitus
ENSPMGG00000010286	cmss1	86	60.697	ENSSSCG00000011970	CMSS1	72	61.084	Sus_scrofa
ENSPMGG00000010286	cmss1	97	59.292	ENSTGUG00000013635	CMSS1	97	58.407	Taeniopygia_guttata
ENSPMGG00000010286	cmss1	88	77.941	ENSTRUG00000015265	cmss1	72	77.941	Takifugu_rubripes
ENSPMGG00000010286	cmss1	88	71.078	ENSTNIG00000002880	cmss1	81	66.667	Tetraodon_nigroviridis
ENSPMGG00000010286	cmss1	87	42.857	ENSTBEG00000016722	CMSS1	72	42.857	Tupaia_belangeri
ENSPMGG00000010286	cmss1	99	57.021	ENSTTRG00000001562	CMSS1	84	57.021	Tursiops_truncatus
ENSPMGG00000010286	cmss1	87	62.069	ENSUAMG00000024209	CMSS1	91	62.069	Ursus_americanus
ENSPMGG00000010286	cmss1	87	61.576	ENSUMAG00000001983	CMSS1	78	61.576	Ursus_maritimus
ENSPMGG00000010286	cmss1	69	62.112	ENSVPAG00000000263	CMSS1	57	62.112	Vicugna_pacos
ENSPMGG00000010286	cmss1	87	62.069	ENSVVUG00000007776	-	80	62.069	Vulpes_vulpes
ENSPMGG00000010286	cmss1	86	62.189	ENSVVUG00000021647	-	82	62.562	Vulpes_vulpes
ENSPMGG00000010286	cmss1	88	59.314	ENSXETG00000011858	cmss1	73	59.314	Xenopus_tropicalis
ENSPMGG00000010286	cmss1	90	76.555	ENSXCOG00000018724	cmss1	70	76.471	Xiphophorus_couchianus
ENSPMGG00000010286	cmss1	90	76.555	ENSXMAG00000011243	cmss1	76	76.471	Xiphophorus_maculatus